RNA–Protein interactions for RNA: ENST00000338862.5

PCDH8-201, Transcript of protocadherin 8, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PCDH8, Length 3,708 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH8-201ENST00000338862 OR10A2Q9H208 303 aa12.58□□□□□ -0.4
PCDH8-201ENST00000338862 ZNF275Q9NSD4 429 aaPredicted RBP12.58□□□□□ -0.4
PCDH8-201ENST00000338862 OR6C65A6NJZ3 312 aa12.58□□□□□ -0.4
PCDH8-201ENST00000338862 H3BMH7 237 aa12.58□□□□□ -0.4
PCDH8-201ENST00000338862 H7C1Q1 480 aa12.58□□□□□ -0.4
PCDH8-201ENST00000338862 LY86O95711 162 aa12.58□□□□□ -0.4
PCDH8-201ENST00000338862 ADCYAP1P18509 176 aa12.58□□□□□ -0.4
PCDH8-201ENST00000338862 TUBG1P23258 451 aa12.58□□□□□ -0.4
PCDH8-201ENST00000338862 LPAR6P43657 344 aa12.58□□□□□ -0.4
PCDH8-201ENST00000338862 DHODHQ02127 395 aa12.58□□□□□ -0.4
PCDH8-201ENST00000338862 FOXF1Q12946 379 aa12.58□□□□□ -0.4
PCDH8-201ENST00000338862 PABPC1L2AQ5JQF8 200 aa12.58□□□□□ -0.4
PCDH8-201ENST00000338862 GRINAQ7Z429 371 aa12.58□□□□□ -0.4
PCDH8-201ENST00000338862 C17orf78Q8N4C9 275 aa12.58□□□□□ -0.4
PCDH8-201ENST00000338862 KIRREL1Q96J84 757 aa12.58□□□□□ -0.4
PCDH8-201ENST00000338862 SPSB2Q99619 263 aa12.58□□□□□ -0.4
PCDH8-201ENST00000338862 LRRC61Q9BV99 259 aa12.58□□□□□ -0.4
PCDH8-201ENST00000338862 KCNIP3Q9Y2W7 256 aa12.58□□□□□ -0.4
PCDH8-201ENST00000338862 PLPP3O14495 311 aa12.57□□□□□ -0.4
PCDH8-201ENST00000338862 EIF3GO75821 320 aaKnown RBP eCLIP12.57□□□□□ -0.4
PCDH8-201ENST00000338862 FABP1P07148 127 aa12.57□□□□□ -0.4
PCDH8-201ENST00000338862 RFC3P40938 356 aa12.57□□□□□ -0.4
PCDH8-201ENST00000338862 DAP3P51398 398 aaKnown RBP12.57□□□□□ -0.4
PCDH8-201ENST00000338862 HAGHQ16775 308 aa12.57□□□□□ -0.4
PCDH8-201ENST00000338862 C9orf152Q5JTZ5 239 aa12.57□□□□□ -0.4
PCDH8-201ENST00000338862 MISPQ8IVT2 679 aa12.57□□□□□ -0.4
PCDH8-201ENST00000338862 KCNG3Q8TAE7 436 aa12.57□□□□□ -0.4
PCDH8-201ENST00000338862 FANCMQ8IYD8 2048 aa12.57□□□□□ -0.4
PCDH8-201ENST00000338862 H0YIZ8 118 aa12.57□□□□□ -0.4
PCDH8-201ENST00000338862 UNC119Q13432 240 aa12.57□□□□□ -0.4
PCDH8-201ENST00000338862 PGAP1Q75T13 922 aa12.57□□□□□ -0.4
PCDH8-201ENST00000338862 HOXB13Q92826 284 aaPredicted RBP12.57□□□□□ -0.4
PCDH8-201ENST00000338862 WBP1Q96G27 269 aa12.57□□□□□ -0.4
PCDH8-201ENST00000338862 ZDHHC12Q96GR4 267 aa12.57□□□□□ -0.4
PCDH8-201ENST00000338862 GPHA2Q96T91 129 aa12.57□□□□□ -0.4
PCDH8-201ENST00000338862 PFDN5Q99471 154 aa12.57□□□□□ -0.4
PCDH8-201ENST00000338862 SERINC1Q9NRX5 453 aa12.57□□□□□ -0.4
PCDH8-201ENST00000338862 FBXL17Q9UF56 701 aa12.57□□□□□ -0.4
PCDH8-201ENST00000338862 TRBV11-1A0A0K0K1C0 115 aa12.57□□□□□ -0.4
PCDH8-201ENST00000338862 A0A1W2PPE2 198 aa12.57□□□□□ -0.4
PCDH8-201ENST00000338862 SPRY1O43609 319 aaPredicted RBP12.57□□□□□ -0.4
PCDH8-201ENST00000338862 BGLAPP02818 100 aa12.57□□□□□ -0.4
PCDH8-201ENST00000338862 GUSBP08236 651 aa12.57□□□□□ -0.4
PCDH8-201ENST00000338862 EPHA1P21709 976 aa12.57□□□□□ -0.4
PCDH8-201ENST00000338862 CX3CR1P49238 355 aa12.57□□□□□ -0.4
PCDH8-201ENST00000338862 CLDN17P56750 224 aa12.57□□□□□ -0.4
PCDH8-201ENST00000338862 FUT7Q11130 342 aa12.57□□□□□ -0.4
PCDH8-201ENST00000338862 MFAP5Q13361 173 aa12.57□□□□□ -0.4
PCDH8-201ENST00000338862 CLEC12BQ2HXU8 276 aa12.57□□□□□ -0.4
PCDH8-201ENST00000338862 ANKRD55Q3KP44 614 aa12.57□□□□□ -0.4
PCDH8-201ENST00000338862 C9orf135Q5VTT2 229 aa12.57□□□□□ -0.4
PCDH8-201ENST00000338862 NKAIN3Q8N8D7 197 aa12.57□□□□□ -0.4
PCDH8-201ENST00000338862 OR5T1Q8NG75 326 aa12.57□□□□□ -0.4
PCDH8-201ENST00000338862 GPR173Q9NS66 373 aa12.57□□□□□ -0.4
PCDH8-201ENST00000338862 LINC00587B1AMM8 73 aa12.56□□□□□ -0.4
PCDH8-201ENST00000338862 F10P00742 488 aa12.56□□□□□ -0.4
PCDH8-201ENST00000338862 GABREP78334 506 aa12.56□□□□□ -0.4
PCDH8-201ENST00000338862 FZD2Q14332 565 aa12.56□□□□□ -0.4
PCDH8-201ENST00000338862 RSU1Q15404 277 aa12.56□□□□□ -0.4
PCDH8-201ENST00000338862 ZNF260Q3ZCT1 412 aa12.56□□□□□ -0.4
PCDH8-201ENST00000338862 PPP1R3BQ86XI6 285 aa12.56□□□□□ -0.4
PCDH8-201ENST00000338862 STX12Q86Y82 276 aa12.56□□□□□ -0.4
PCDH8-201ENST00000338862 IP6K3Q96PC2 410 aa12.56□□□□□ -0.4
PCDH8-201ENST00000338862 NRIP2Q9BQI9 281 aa12.56□□□□□ -0.4
PCDH8-201ENST00000338862 ZNF442Q9H7R0 627 aa12.56□□□□□ -0.4
PCDH8-201ENST00000338862 WIF1Q9Y5W5 379 aa12.56□□□□□ -0.4
PCDH8-201ENST00000338862 UMAD1C9J7I0 102 aa12.56□□□□□ -0.4
PCDH8-201ENST00000338862 GPR37O15354 613 aa12.56□□□□□ -0.4
PCDH8-201ENST00000338862 QDPRP09417 244 aa12.56□□□□□ -0.4
PCDH8-201ENST00000338862 MTCP1P56278 107 aa12.56□□□□□ -0.4
PCDH8-201ENST00000338862 RAET1LQ5VY80 246 aa12.56□□□□□ -0.4
PCDH8-201ENST00000338862 ASPHD2Q6ICH7 369 aa12.56□□□□□ -0.4
PCDH8-201ENST00000338862 APCDD1LQ8NCL9 501 aa12.56□□□□□ -0.4
PCDH8-201ENST00000338862 PRRC2CQ9Y520 2896 aaKnown RBP12.56□□□□□ -0.4
PCDH8-201ENST00000338862 BORCS7-ASMTA0A0B4J1R7 106 aa12.55□□□□□ -0.4
PCDH8-201ENST00000338862 NPIPB9F8W1W9 429 aa12.55□□□□□ -0.4
PCDH8-201ENST00000338862 TNFRSF10CO14798 259 aa12.55□□□□□ -0.4
PCDH8-201ENST00000338862 ZNF16P17020 682 aaPredicted RBP12.55□□□□□ -0.4
PCDH8-201ENST00000338862 LAP3P28838 519 aa12.55□□□□□ -0.4
PCDH8-201ENST00000338862 S100A2P29034 98 aa12.55□□□□□ -0.4
PCDH8-201ENST00000338862 C9orf40Q8IXQ3 194 aa12.55□□□□□ -0.4
PCDH8-201ENST00000338862 OR9K2Q8NGE7 335 aa12.55□□□□□ -0.4
PCDH8-201ENST00000338862 AKR7LQ8NHP1 331 aa12.55□□□□□ -0.4
PCDH8-201ENST00000338862 STT3BQ8TCJ2 826 aa12.55□□□□□ -0.4
PCDH8-201ENST00000338862 CNTNAP3Q9BZ76 1288 aa12.55□□□□□ -0.4
PCDH8-201ENST00000338862 LPAR3Q9UBY5 353 aa12.55□□□□□ -0.4
PCDH8-201ENST00000338862 B3GALT5Q9Y2C3 310 aa12.55□□□□□ -0.4
PCDH8-201ENST00000338862 SPTY2D1-AS1A0A0U1RR47 76 aa12.55□□□□□ -0.4
PCDH8-201ENST00000338862 TTRP02766 147 aa12.55□□□□□ -0.4
PCDH8-201ENST00000338862 GNRHRP30968 328 aa12.55□□□□□ -0.4
PCDH8-201ENST00000338862 TNFRSF4P43489 277 aa12.55□□□□□ -0.4
PCDH8-201ENST00000338862 TMEM33P57088 247 aa12.55□□□□□ -0.4
PCDH8-201ENST00000338862 YPEL5P62699 121 aa12.55□□□□□ -0.4
PCDH8-201ENST00000338862 RIPPLY1Q0D2K3 151 aa12.55□□□□□ -0.4
PCDH8-201ENST00000338862 CPEB4Q17RY0 729 aaKnown RBP eCLIP12.55□□□□□ -0.4
PCDH8-201ENST00000338862 FBXW12Q6X9E4 464 aa12.55□□□□□ -0.4
PCDH8-201ENST00000338862 LRRC75AQ8NAA5 344 aa12.55□□□□□ -0.4
PCDH8-201ENST00000338862 OR56B1Q8NGI3 324 aa12.55□□□□□ -0.4
PCDH8-201ENST00000338862 OR4A4PQ8NGN8 299 aa12.55□□□□□ -0.4
PCDH8-201ENST00000338862 OR14K1Q8NGZ2 314 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms