RNA–Protein interactions for RNA: ENST00000338468.7

PRKN-201, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 1,276 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-201ENST00000338468 MNTQ99583 582 aa12.76□□□□□ -0.37
PRKN-201ENST00000338468 PBOV1Q9GZY1 135 aa12.76□□□□□ -0.37
PRKN-201ENST00000338468 C1orf123Q9NWV4 160 aa12.76□□□□□ -0.37
PRKN-201ENST00000338468 RNF7Q9UBF6 113 aa12.76□□□□□ -0.37
PRKN-201ENST00000338468 OPN4Q9UHM6 478 aa12.76□□□□□ -0.37
PRKN-201ENST00000338468 PPIAL4CA0A0B4J2A2 164 aa12.75□□□□□ -0.37
PRKN-201ENST00000338468 A0A0G2JMP0 313 aa12.75□□□□□ -0.37
PRKN-201ENST00000338468 A0A0X1KG70 313 aa12.75□□□□□ -0.37
PRKN-201ENST00000338468 FOXH1O75593 365 aa12.75□□□□□ -0.37
PRKN-201ENST00000338468 CST4P01036 141 aa12.75□□□□□ -0.37
PRKN-201ENST00000338468 LHBP01229 141 aa12.75□□□□□ -0.37
PRKN-201ENST00000338468 IRF2P14316 349 aa12.75□□□□□ -0.37
PRKN-201ENST00000338468 CDC42P60953 191 aa12.75□□□□□ -0.37
PRKN-201ENST00000338468 PAX2Q02962 417 aa12.75□□□□□ -0.37
PRKN-201ENST00000338468 ZNF684Q5T5D7 378 aa12.75□□□□□ -0.37
PRKN-201ENST00000338468 DCAF12L2Q5VW00 463 aa12.75□□□□□ -0.37
PRKN-201ENST00000338468 LYPD2Q6UXB3 125 aa12.75□□□□□ -0.37
PRKN-201ENST00000338468 PLEKHG7Q6ZR37 379 aa12.75□□□□□ -0.37
PRKN-201ENST00000338468 GCSAMQ8N6F7 178 aa12.75□□□□□ -0.37
PRKN-201ENST00000338468 OR4M2Q8NGB6 313 aa12.75□□□□□ -0.37
PRKN-201ENST00000338468 OR8S1Q8NH09 359 aa12.75□□□□□ -0.37
PRKN-201ENST00000338468 PAPOLGQ9BWT3 736 aaKnown RBP12.75□□□□□ -0.37
PRKN-201ENST00000338468 METTL17Q9H7H0 456 aaPredicted RBP12.75□□□□□ -0.37
PRKN-201ENST00000338468 C14orf119Q9NWQ9 140 aa12.75□□□□□ -0.37
PRKN-201ENST00000338468 NUFIP1Q9UHK0 495 aaKnown RBP12.75□□□□□ -0.37
PRKN-201ENST00000338468 ZNF391Q9UJN7 358 aa12.75□□□□□ -0.37
PRKN-201ENST00000338468 IKZF2Q9UKS7 526 aa12.75□□□□□ -0.37
PRKN-201ENST00000338468 LOC105371242A0A075B767 164 aa12.74□□□□□ -0.37
PRKN-201ENST00000338468 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.74□□□□□ -0.37
PRKN-201ENST00000338468 A0A1W2PQL4 384 aaPredicted RBP12.74□□□□□ -0.37
PRKN-201ENST00000338468 ZNF670-ZNF695F2Z2N8 137 aa12.74□□□□□ -0.37
PRKN-201ENST00000338468 J3QLI3 93 aa12.74□□□□□ -0.37
PRKN-201ENST00000338468 PHYHO14832 338 aa12.74□□□□□ -0.37
PRKN-201ENST00000338468 TNFRSF13BO14836 293 aaPredicted RBP12.74□□□□□ -0.37
PRKN-201ENST00000338468 ENTPD6O75354 484 aa12.74□□□□□ -0.37
PRKN-201ENST00000338468 TTRP02766 147 aa12.74□□□□□ -0.37
PRKN-201ENST00000338468 EGR1P18146 543 aa12.74□□□□□ -0.37
PRKN-201ENST00000338468 CD80P33681 288 aa12.74□□□□□ -0.37
PRKN-201ENST00000338468 SRP14P37108 136 aaKnown RBP12.74□□□□□ -0.37
PRKN-201ENST00000338468 SNRPGP62308 76 aaKnown RBP12.74□□□□□ -0.37
PRKN-201ENST00000338468 CSNK2BP67870 215 aa12.74□□□□□ -0.37
PRKN-201ENST00000338468 EGR3Q06889 387 aa12.74□□□□□ -0.37
PRKN-201ENST00000338468 ZNF154Q13106 437 aa12.74□□□□□ -0.37
PRKN-201ENST00000338468 PRDX4Q13162 271 aa12.74□□□□□ -0.37
PRKN-201ENST00000338468 SLC25A30Q5SVS4 291 aa12.74□□□□□ -0.37
PRKN-201ENST00000338468 LIPNQ5VXI9 398 aa12.74□□□□□ -0.37
PRKN-201ENST00000338468 SFRP4Q6FHJ7 346 aaPredicted RBP12.74□□□□□ -0.37
PRKN-201ENST00000338468 ZNF841Q6ZN19 808 aa12.74□□□□□ -0.37
PRKN-201ENST00000338468 GALNT4Q8N4A0 578 aa12.74□□□□□ -0.37
PRKN-201ENST00000338468 DEFB108BQ8NET1 73 aa12.74□□□□□ -0.37
PRKN-201ENST00000338468 OR1M1Q8NGA1 313 aa12.74□□□□□ -0.37
PRKN-201ENST00000338468 OR51E1Q8TCB6 317 aa12.74□□□□□ -0.37
PRKN-201ENST00000338468 TRUB1Q8WWH5 349 aaKnown RBP12.74□□□□□ -0.37
PRKN-201ENST00000338468 HPSE2Q8WWQ2 592 aa12.74□□□□□ -0.37
PRKN-201ENST00000338468 OR5P3Q8WZ94 311 aa12.74□□□□□ -0.37
PRKN-201ENST00000338468 DACT3Q96B18 629 aaPredicted RBP12.74□□□□□ -0.37
PRKN-201ENST00000338468 TBX5Q99593 518 aa12.74□□□□□ -0.37
PRKN-201ENST00000338468 C9orf16Q9BUW7 83 aa12.74□□□□□ -0.37
PRKN-201ENST00000338468 TLNRD1Q9H1K6 362 aa12.74□□□□□ -0.37
PRKN-201ENST00000338468 AASSQ9UDR5 926 aa12.74□□□□□ -0.37
PRKN-201ENST00000338468 MIOXQ9UGB7 285 aa12.74□□□□□ -0.37
PRKN-201ENST00000338468 ORC6Q9Y5N6 252 aa12.74□□□□□ -0.37
PRKN-201ENST00000338468 ZNF850A8MQ14 1090 aa12.73□□□□□ -0.37
PRKN-201ENST00000338468 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.73□□□□□ -0.37
PRKN-201ENST00000338468 J3QRE1 110 aa12.73□□□□□ -0.37
PRKN-201ENST00000338468 LGALS8O00214 317 aa12.73□□□□□ -0.37
PRKN-201ENST00000338468 FSHBP01225 129 aa12.73□□□□□ -0.37
PRKN-201ENST00000338468 OR2T7P0C7T2 308 aa12.73□□□□□ -0.37
PRKN-201ENST00000338468 RPS2P15880 293 aaKnown RBP12.73□□□□□ -0.37
PRKN-201ENST00000338468 ZNF12P17014 697 aa12.73□□□□□ -0.37
PRKN-201ENST00000338468 GABRB1P18505 474 aa12.73□□□□□ -0.37
PRKN-201ENST00000338468 ADRA2CP18825 462 aa12.73□□□□□ -0.37
PRKN-201ENST00000338468 GATA3P23771 443 aa12.73□□□□□ -0.37
PRKN-201ENST00000338468 CPT2P23786 658 aa12.73□□□□□ -0.37
PRKN-201ENST00000338468 PSMB10P40306 273 aa12.73□□□□□ -0.37
PRKN-201ENST00000338468 MZT1Q08AG7 82 aa12.73□□□□□ -0.37
PRKN-201ENST00000338468 POU4F2Q12837 409 aa12.73□□□□□ -0.37
PRKN-201ENST00000338468 TMED1Q13445 227 aa12.73□□□□□ -0.37
PRKN-201ENST00000338468 ZNF829Q3KNS6 432 aaPredicted RBP12.73□□□□□ -0.37
PRKN-201ENST00000338468 ESCO2Q56NI9 601 aa12.73□□□□□ -0.37
PRKN-201ENST00000338468 WDR82Q6UXN9 313 aa12.73□□□□□ -0.37
PRKN-201ENST00000338468 DCDC5Q6ZRR9 648 aa12.73□□□□□ -0.37
PRKN-201ENST00000338468 BOLLQ8N9W6 283 aaKnown RBP12.73□□□□□ -0.37
PRKN-201ENST00000338468 OR2T27Q8NH04 317 aa12.73□□□□□ -0.37
PRKN-201ENST00000338468 RNF166Q96A37 237 aaPredicted RBP12.73□□□□□ -0.37
PRKN-201ENST00000338468 NEIL1Q96FI4 390 aaPredicted RBP12.73□□□□□ -0.37
PRKN-201ENST00000338468 GPR84Q9NQS5 396 aa12.73□□□□□ -0.37
PRKN-201ENST00000338468 CTSZQ9UBR2 303 aa12.73□□□□□ -0.37
PRKN-201ENST00000338468 LRCH1Q9Y2L9 728 aa12.73□□□□□ -0.37
PRKN-201ENST00000338468 INSIG2Q9Y5U4 225 aa12.73□□□□□ -0.37
PRKN-201ENST00000338468 MPC1Q9Y5U8 109 aa12.73□□□□□ -0.37
PRKN-201ENST00000338468 R4GMQ9 66 aa12.73□□□□□ -0.37
PRKN-201ENST00000338468 A0A1B0GTI1 187 aa12.72□□□□□ -0.37
PRKN-201ENST00000338468 A6NLC8 198 aa12.72□□□□□ -0.37
PRKN-201ENST00000338468 C3orf80F5H4A9 247 aa12.72□□□□□ -0.37
PRKN-201ENST00000338468 LOC110117498-PIK3R3F6TDL0 507 aa12.72□□□□□ -0.37
PRKN-201ENST00000338468 DLGAP1O14490 977 aa12.72□□□□□ -0.37
PRKN-201ENST00000338468 FCN3O75636 299 aa12.72□□□□□ -0.37
PRKN-201ENST00000338468 GNALP38405 381 aa12.72□□□□□ -0.37
PRKN-201ENST00000338468 IL5RAQ01344 420 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms