RNA–Protein interactions for RNA: ENST00000337299.6

COL2A1-201, Transcript of collagen type II alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL2A1, Length 4,257 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-201ENST00000337299 SLC25A42Q86VD7 318 aa11.89□□□□□ -0.51
COL2A1-201ENST00000337299 SLC35G3Q8N808 338 aa11.89□□□□□ -0.51
COL2A1-201ENST00000337299 OR8B4Q96RC9 309 aa11.89□□□□□ -0.51
COL2A1-201ENST00000337299 ADAM19Q9H013 955 aa11.89□□□□□ -0.51
COL2A1-201ENST00000337299 ZNF286AQ9HBT8 521 aa11.89□□□□□ -0.51
COL2A1-201ENST00000337299 RAB18Q9NP72 206 aa11.89□□□□□ -0.51
COL2A1-201ENST00000337299 MED29Q9NX70 200 aa11.89□□□□□ -0.51
COL2A1-201ENST00000337299 RCL1Q9Y2P8 373 aaKnown RBP11.89□□□□□ -0.51
COL2A1-201ENST00000337299 ZNF638Q14966 1978 aaKnown RBP11.89□□□□□ -0.51
COL2A1-201ENST00000337299 CFIP05156 583 aa11.89□□□□□ -0.51
COL2A1-201ENST00000337299 HOXB9P17482 250 aaPredicted RBP11.89□□□□□ -0.51
COL2A1-201ENST00000337299 IQCJQ1A5X6 159 aa11.89□□□□□ -0.51
COL2A1-201ENST00000337299 NCR3LG1Q68D85 454 aa11.89□□□□□ -0.51
COL2A1-201ENST00000337299 LMX1AQ8TE12 382 aa11.89□□□□□ -0.51
COL2A1-201ENST00000337299 DTD1Q8TEA8 209 aa11.89□□□□□ -0.51
COL2A1-201ENST00000337299 GPX8Q8TED1 209 aa11.89□□□□□ -0.51
COL2A1-201ENST00000337299 LHX4Q969G2 390 aa11.89□□□□□ -0.51
COL2A1-201ENST00000337299 ARHGAP5-AS1Q96IT6 56 aa11.89□□□□□ -0.51
COL2A1-201ENST00000337299 TMEM229AB2RXF0 380 aa11.88□□□□□ -0.51
COL2A1-201ENST00000337299 TCF21O43680 179 aa11.88□□□□□ -0.51
COL2A1-201ENST00000337299 SLC6A8P48029 635 aa11.88□□□□□ -0.51
COL2A1-201ENST00000337299 KRTDAPP60985 99 aa11.88□□□□□ -0.51
COL2A1-201ENST00000337299 RPL27P61353 136 aaKnown RBP11.88□□□□□ -0.51
COL2A1-201ENST00000337299 KIR2DS3Q14952 304 aa11.88□□□□□ -0.51
COL2A1-201ENST00000337299 SHHQ15465 462 aa11.88□□□□□ -0.51
COL2A1-201ENST00000337299 TSPO2Q5TGU0 170 aa11.88□□□□□ -0.51
COL2A1-201ENST00000337299 FIP1L1Q6UN15 594 aaKnown RBP11.88□□□□□ -0.51
COL2A1-201ENST00000337299 PPP1R3BQ86XI6 285 aa11.88□□□□□ -0.51
COL2A1-201ENST00000337299 LINC01555Q8NAE3 123 aa11.88□□□□□ -0.51
COL2A1-201ENST00000337299 OR51H1Q8NH63 302 aa11.88□□□□□ -0.51
COL2A1-201ENST00000337299 STACQ99469 402 aa11.88□□□□□ -0.51
COL2A1-201ENST00000337299 VN1R3Q9BXE9 311 aa11.88□□□□□ -0.51
COL2A1-201ENST00000337299 SIRT7Q9NRC8 400 aa11.88□□□□□ -0.51
COL2A1-201ENST00000337299 LRP12Q9Y561 859 aa11.88□□□□□ -0.51
COL2A1-201ENST00000337299 FAM24AA6NFZ4 105 aa11.88□□□□□ -0.51
COL2A1-201ENST00000337299 OR4C45A6NMZ5 311 aa11.88□□□□□ -0.51
COL2A1-201ENST00000337299 NPIPA2E9PIF3 369 aa11.88□□□□□ -0.51
COL2A1-201ENST00000337299 NPIPA3F8WFD2 350 aa11.88□□□□□ -0.51
COL2A1-201ENST00000337299 BRINP1O60477 761 aa11.88□□□□□ -0.51
COL2A1-201ENST00000337299 UTS2O95399 124 aa11.88□□□□□ -0.51
COL2A1-201ENST00000337299 ADH1BP00325 375 aa11.88□□□□□ -0.51
COL2A1-201ENST00000337299 TK1P04183 234 aa11.88□□□□□ -0.51
COL2A1-201ENST00000337299 SLC25A4P12235 298 aa11.88□□□□□ -0.51
COL2A1-201ENST00000337299 KLK2P20151 261 aa11.88□□□□□ -0.51
COL2A1-201ENST00000337299 NTF3P20783 257 aa11.88□□□□□ -0.51
COL2A1-201ENST00000337299 MALLQ13021 153 aa11.88□□□□□ -0.51
COL2A1-201ENST00000337299 ZAR1Q86SH2 424 aa11.88□□□□□ -0.51
COL2A1-201ENST00000337299 OR52N4Q8NGI2 321 aa11.88□□□□□ -0.51
COL2A1-201ENST00000337299 OTOSQ8NHW6 89 aa11.88□□□□□ -0.51
COL2A1-201ENST00000337299 UCK1Q9HA47 277 aa11.88□□□□□ -0.51
COL2A1-201ENST00000337299 GOLT1BQ9Y3E0 138 aa11.88□□□□□ -0.51
COL2A1-201ENST00000337299 NPTNQ9Y639 398 aa11.88□□□□□ -0.51
COL2A1-201ENST00000337299 CACNA1EQ15878 2313 aa11.88□□□□□ -0.51
COL2A1-201ENST00000337299 TMED7-TICAM2A0A0A6YYA0 188 aa11.88□□□□□ -0.51
COL2A1-201ENST00000337299 ZNF320A2RRD8 509 aa11.88□□□□□ -0.51
COL2A1-201ENST00000337299 SLC31A2O15432 143 aa11.88□□□□□ -0.51
COL2A1-201ENST00000337299 PNPP00491 289 aa11.88□□□□□ -0.51
COL2A1-201ENST00000337299 NDUFB7P17568 137 aa11.88□□□□□ -0.51
COL2A1-201ENST00000337299 SNCAP37840 140 aa11.88□□□□□ -0.51
COL2A1-201ENST00000337299 FHITP49789 147 aa11.88□□□□□ -0.51
COL2A1-201ENST00000337299 RPS4XP62701 263 aaKnown RBP11.88□□□□□ -0.51
COL2A1-201ENST00000337299 ZNF880Q6PDB4 577 aa11.88□□□□□ -0.51
COL2A1-201ENST00000337299 DAZLQ92904 295 aaKnown RBP11.88□□□□□ -0.51
COL2A1-201ENST00000337299 KTI12Q96EK9 354 aaPredicted RBP11.88□□□□□ -0.51
COL2A1-201ENST00000337299 KLHDC7BQ96G42 594 aa11.88□□□□□ -0.51
COL2A1-201ENST00000337299 ZNF845Q96IR2 970 aaPredicted RBP11.88□□□□□ -0.51
COL2A1-201ENST00000337299 MOGAT1Q96PD6 335 aa11.88□□□□□ -0.51
COL2A1-201ENST00000337299 METTL1Q9UBP6 276 aaKnown RBP11.88□□□□□ -0.51
COL2A1-201ENST00000337299 V9GYS6 101 aa11.88□□□□□ -0.51
COL2A1-201ENST00000337299 TRAV36DV7A0A075B6V5 113 aa11.87□□□□□ -0.51
COL2A1-201ENST00000337299 C4orf47A7E2U8 309 aa11.87□□□□□ -0.51
COL2A1-201ENST00000337299 NDUFA2O43678 99 aa11.87□□□□□ -0.51
COL2A1-201ENST00000337299 HHEXQ03014 270 aa11.87□□□□□ -0.51
COL2A1-201ENST00000337299 AGBL4Q5VU57 503 aa11.87□□□□□ -0.51
COL2A1-201ENST00000337299 ZNF343Q6P1L6 599 aa11.87□□□□□ -0.51
COL2A1-201ENST00000337299 OR52N5Q8NH56 324 aa11.87□□□□□ -0.51
COL2A1-201ENST00000337299 CNTD2Q9H8S5 307 aa11.87□□□□□ -0.51
COL2A1-201ENST00000337299 GPR84Q9NQS5 396 aa11.87□□□□□ -0.51
COL2A1-201ENST00000337299 FLRT3Q9NZU0 649 aa11.87□□□□□ -0.51
COL2A1-201ENST00000337299 A0A1W2PPV4 95 aa11.87□□□□□ -0.51
COL2A1-201ENST00000337299 NOVA1P51513 510 aaKnown RBP11.87□□□□□ -0.51
COL2A1-201ENST00000337299 HABP2Q14520 560 aaPredicted RBP11.87□□□□□ -0.51
COL2A1-201ENST00000337299 MLC1Q15049 377 aa11.87□□□□□ -0.51
COL2A1-201ENST00000337299 PRTGQ2VWP7 1150 aa11.87□□□□□ -0.51
COL2A1-201ENST00000337299 ARRDC1Q8N5I2 433 aa11.87□□□□□ -0.51
COL2A1-201ENST00000337299 OR4F5Q8NH21 305 aa11.87□□□□□ -0.51
COL2A1-201ENST00000337299 OR4F4Q96R69 305 aa11.87□□□□□ -0.51
COL2A1-201ENST00000337299 IL21Q9HBE4 155 aa11.87□□□□□ -0.51
COL2A1-201ENST00000337299 RYDENQ9NUL5 291 aaKnown RBP11.87□□□□□ -0.51
COL2A1-201ENST00000337299 HAO2Q9NYQ3 351 aa11.87□□□□□ -0.51
COL2A1-201ENST00000337299 KCNK7Q9Y2U2 307 aa11.87□□□□□ -0.51
COL2A1-201ENST00000337299 NSG1A0A0A6YYJ2 146 aa11.87□□□□□ -0.51
COL2A1-201ENST00000337299 RBFOX3A6NFN3 312 aa11.87□□□□□ -0.51
COL2A1-201ENST00000337299 MPZL1O95297 269 aa11.87□□□□□ -0.51
COL2A1-201ENST00000337299 PTBP3O95758 552 aaKnown RBP11.87□□□□□ -0.51
COL2A1-201ENST00000337299 MMP9P14780 707 aa11.87□□□□□ -0.51
COL2A1-201ENST00000337299 ADRA2CP18825 462 aa11.87□□□□□ -0.51
COL2A1-201ENST00000337299 NKAIN1Q4KMZ8 207 aa11.87□□□□□ -0.51
COL2A1-201ENST00000337299 UBE3DQ7Z6J8 389 aa11.87□□□□□ -0.51
COL2A1-201ENST00000337299 ZNF547Q8IVP9 402 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms