RNA–Protein interactions for RNA: ENST00000336604.8

IFFO1-201, Transcript of intermediate filament family orphan 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene IFFO1, Length 2,686 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFFO1-201ENST00000336604 RAB3CQ96E17 227 aa15.73■□□□□ 0.11
IFFO1-201ENST00000336604 FAHD2AQ96GK7 314 aa15.73■□□□□ 0.11
IFFO1-201ENST00000336604 TLNRD1Q9H1K6 362 aa15.73■□□□□ 0.11
IFFO1-201ENST00000336604 MYOTQ9UBF9 498 aa15.73■□□□□ 0.11
IFFO1-201ENST00000336604 RAD51DO75771 328 aa15.72■□□□□ 0.11
IFFO1-201ENST00000336604 EIF3GO75821 320 aaKnown RBP eCLIP15.72■□□□□ 0.11
IFFO1-201ENST00000336604 HCKP08631 526 aa15.72■□□□□ 0.11
IFFO1-201ENST00000336604 PI3P19957 117 aa15.72■□□□□ 0.11
IFFO1-201ENST00000336604 SERPINF1P36955 418 aa15.72■□□□□ 0.11
IFFO1-201ENST00000336604 NPY4RP50391 375 aa15.72■□□□□ 0.11
IFFO1-201ENST00000336604 POLR2GP62487 172 aaKnown RBP eCLIP15.72■□□□□ 0.11
IFFO1-201ENST00000336604 SLC16A13Q7RTY0 426 aa15.72■□□□□ 0.11
IFFO1-201ENST00000336604 HOGA1Q86XE5 327 aa15.72■□□□□ 0.11
IFFO1-201ENST00000336604 SFT2D1Q8WV19 159 aa15.72■□□□□ 0.11
IFFO1-201ENST00000336604 RNF138Q8WVD3 245 aa15.72■□□□□ 0.11
IFFO1-201ENST00000336604 PCED1AQ9H1Q7 454 aa15.72■□□□□ 0.11
IFFO1-201ENST00000336604 CHMP1AQ9HD42 196 aaPredicted RBP15.72■□□□□ 0.11
IFFO1-201ENST00000336604 PRR13Q9NZ81 148 aa15.72■□□□□ 0.11
IFFO1-201ENST00000336604 FBLN5Q9UBX5 448 aa15.72■□□□□ 0.11
IFFO1-201ENST00000336604 MBTPS2O43462 519 aa15.72■□□□□ 0.11
IFFO1-201ENST00000336604 CDC14BO60729 498 aa15.72■□□□□ 0.11
IFFO1-201ENST00000336604 SCRG1O75711 98 aa15.72■□□□□ 0.11
IFFO1-201ENST00000336604 SCGNO76038 276 aa15.72■□□□□ 0.11
IFFO1-201ENST00000336604 PGAM2P15259 253 aa15.72■□□□□ 0.11
IFFO1-201ENST00000336604 CBR1P16152 277 aa15.72■□□□□ 0.11
IFFO1-201ENST00000336604 NPBWR1P48145 328 aa15.72■□□□□ 0.11
IFFO1-201ENST00000336604 TMEM50BP56557 158 aa15.72■□□□□ 0.11
IFFO1-201ENST00000336604 TERB2Q8NHR7 220 aa15.72■□□□□ 0.11
IFFO1-201ENST00000336604 ROBO4Q8WZ75 1007 aa15.72■□□□□ 0.11
IFFO1-201ENST00000336604 ADAMTS20P59510 1910 aa15.72■□□□□ 0.11
IFFO1-201ENST00000336604 C5orf63A6NC05 138 aa15.71■□□□□ 0.11
IFFO1-201ENST00000336604 DBX1A6NMT0 343 aa15.71■□□□□ 0.11
IFFO1-201ENST00000336604 E9PLN8 166 aa15.71■□□□□ 0.11
IFFO1-201ENST00000336604 ACTL6AO96019 429 aa15.71■□□□□ 0.11
IFFO1-201ENST00000336604 CRHP06850 196 aa15.71■□□□□ 0.11
IFFO1-201ENST00000336604 NFYBP25208 207 aa15.71■□□□□ 0.11
IFFO1-201ENST00000336604 GSK3AP49840 483 aa15.71■□□□□ 0.11
IFFO1-201ENST00000336604 FAM57BQ71RH2 274 aa15.71■□□□□ 0.11
IFFO1-201ENST00000336604 RABEPKQ7Z6M1 372 aa15.71■□□□□ 0.11
IFFO1-201ENST00000336604 ARMC10Q8N2F6 343 aa15.71■□□□□ 0.11
IFFO1-201ENST00000336604 OR5D18Q8NGL1 313 aa15.71■□□□□ 0.11
IFFO1-201ENST00000336604 CPNE2Q96FN4 548 aaPredicted RBP15.71■□□□□ 0.11
IFFO1-201ENST00000336604 TMEM59Q9BXS4 323 aa15.71■□□□□ 0.11
IFFO1-201ENST00000336604 PNRC2Q9NPJ4 139 aaKnown RBP15.71■□□□□ 0.11
IFFO1-201ENST00000336604 CSAG2Q9Y5P2 127 aa15.71■□□□□ 0.11
IFFO1-201ENST00000336604 SGCEO43556 437 aa15.71■□□□□ 0.11
IFFO1-201ENST00000336604 QDPRP09417 244 aa15.71■□□□□ 0.11
IFFO1-201ENST00000336604 HIST1H1DP16402 221 aaKnown RBP15.71■□□□□ 0.11
IFFO1-201ENST00000336604 TBPP20226 339 aa15.71■□□□□ 0.11
IFFO1-201ENST00000336604 CX3CR1P49238 355 aa15.71■□□□□ 0.11
IFFO1-201ENST00000336604 LCN10Q6JVE6 187 aa15.71■□□□□ 0.11
IFFO1-201ENST00000336604 RXFP4Q8TDU9 374 aa15.71■□□□□ 0.11
IFFO1-201ENST00000336604 GLYATL2Q8WU03 294 aa15.71■□□□□ 0.11
IFFO1-201ENST00000336604 ARHGAP5-AS1Q96IT6 56 aa15.71■□□□□ 0.11
IFFO1-201ENST00000336604 GPER1Q99527 375 aa15.71■□□□□ 0.11
IFFO1-201ENST00000336604 PHF7Q9BWX1 381 aaPredicted RBP15.71■□□□□ 0.11
IFFO1-201ENST00000336604 C5orf66Q9H5L9 145 aa15.71■□□□□ 0.11
IFFO1-201ENST00000336604 TREM1Q9NP99 234 aa15.71■□□□□ 0.11
IFFO1-201ENST00000336604 ZNF629Q9UEG4 869 aaPredicted RBP15.71■□□□□ 0.11
IFFO1-201ENST00000336604 PISDQ9UG56 409 aa15.71■□□□□ 0.11
IFFO1-201ENST00000336604 CRTAPO75718 401 aaPredicted RBP15.71■□□□□ 0.1
IFFO1-201ENST00000336604 CHRM2P08172 466 aa15.71■□□□□ 0.1
IFFO1-201ENST00000336604 ZNF806P0C7X5 589 aa15.71■□□□□ 0.1
IFFO1-201ENST00000336604 PSMB6P28072 239 aa15.71■□□□□ 0.1
IFFO1-201ENST00000336604 PLEKHN1Q494U1 663 aaPredicted RBP15.71■□□□□ 0.1
IFFO1-201ENST00000336604 SLC25A53Q5H9E4 307 aa15.71■□□□□ 0.1
IFFO1-201ENST00000336604 FAM219AQ8IW50 185 aa15.71■□□□□ 0.1
IFFO1-201ENST00000336604 OR5L2Q8NGL0 311 aa15.71■□□□□ 0.1
IFFO1-201ENST00000336604 KCNG3Q8TAE7 436 aa15.71■□□□□ 0.1
IFFO1-201ENST00000336604 PHYHIPLQ96FC7 376 aa15.71■□□□□ 0.1
IFFO1-201ENST00000336604 MOB1AQ9H8S9 216 aa15.71■□□□□ 0.1
IFFO1-201ENST00000336604 IGKV1-9A0A0C4DH69 117 aa15.7■□□□□ 0.1
IFFO1-201ENST00000336604 PQLC2LA1A4F0 135 aa15.7■□□□□ 0.1
IFFO1-201ENST00000336604 ZNF43P17038 809 aa15.7■□□□□ 0.1
IFFO1-201ENST00000336604 DCDP81605 110 aaKnown RBP15.7■□□□□ 0.1
IFFO1-201ENST00000336604 TMEM176BQ3YBM2 270 aaPredicted RBP15.7■□□□□ 0.1
IFFO1-201ENST00000336604 PRAMEF20Q5VT98 475 aa15.7■□□□□ 0.1
IFFO1-201ENST00000336604 SLC25A47Q6Q0C1 308 aa15.7■□□□□ 0.1
IFFO1-201ENST00000336604 CPEB2Q7Z5Q1 589 aaKnown RBP15.7■□□□□ 0.1
IFFO1-201ENST00000336604 NAA40Q86UY6 237 aa15.7■□□□□ 0.1
IFFO1-201ENST00000336604 LURAP1LQ8IV03 231 aa15.7■□□□□ 0.1
IFFO1-201ENST00000336604 OR4K17Q8NGC6 315 aa15.7■□□□□ 0.1
IFFO1-201ENST00000336604 NPRL2Q8WTW4 380 aa15.7■□□□□ 0.1
IFFO1-201ENST00000336604 DCUN1D4Q92564 292 aa15.7■□□□□ 0.1
IFFO1-201ENST00000336604 NUDT16L1Q9BRJ7 211 aaKnown RBP15.7■□□□□ 0.1
IFFO1-201ENST00000336604 AKIRIN1Q9H9L7 192 aaPredicted RBP15.7■□□□□ 0.1
IFFO1-201ENST00000336604 ACAA1P09110 424 aaPredicted RBP15.7■□□□□ 0.1
IFFO1-201ENST00000336604 MSX1P28360 303 aa15.7■□□□□ 0.1
IFFO1-201ENST00000336604 PDZK1IP1Q13113 114 aa15.7■□□□□ 0.1
IFFO1-201ENST00000336604 SLC9A3R2Q15599 337 aa15.7■□□□□ 0.1
IFFO1-201ENST00000336604 AKIRIN2Q53H80 203 aa15.7■□□□□ 0.1
IFFO1-201ENST00000336604 TMEM128Q5BJH2 165 aa15.7■□□□□ 0.1
IFFO1-201ENST00000336604 UQCC3Q6UW78 93 aa15.7■□□□□ 0.1
IFFO1-201ENST00000336604 ZNF283Q8N7M2 679 aa15.7■□□□□ 0.1
IFFO1-201ENST00000336604 OR5AP2Q8NGF4 316 aa15.7■□□□□ 0.1
IFFO1-201ENST00000336604 TMEM230Q96A57 120 aa15.7■□□□□ 0.1
IFFO1-201ENST00000336604 ADAP1O75689 374 aa15.69■□□□□ 0.1
IFFO1-201ENST00000336604 SNRPEP62304 92 aaKnown RBP15.69■□□□□ 0.1
IFFO1-201ENST00000336604 SHBQ15464 509 aa15.69■□□□□ 0.1
IFFO1-201ENST00000336604 AVPI1Q5T686 147 aa15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms