RNA–Protein interactions for RNA: ENST00000331163.10

PDGFB-201, Transcript of platelet derived growth factor subunit B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFB, Length 3,497 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFB-201ENST00000331163 SMIM19Q96E16 107 aa13.96□□□□□ -0.17
PDGFB-201ENST00000331163 OR8B4Q96RC9 309 aa13.96□□□□□ -0.17
PDGFB-201ENST00000331163 TAAR6Q96RI8 345 aa13.96□□□□□ -0.17
PDGFB-201ENST00000331163 KCNK17Q96T54 332 aa13.96□□□□□ -0.17
PDGFB-201ENST00000331163 MICU1Q9BPX6 476 aa13.96□□□□□ -0.17
PDGFB-201ENST00000331163 OPN3Q9H1Y3 402 aaPredicted RBP13.96□□□□□ -0.17
PDGFB-201ENST00000331163 KLK11Q9UBX7 282 aa13.96□□□□□ -0.17
PDGFB-201ENST00000331163 PGA4P0DJD7 388 aa13.96□□□□□ -0.17
PDGFB-201ENST00000331163 PGA3P0DJD8 388 aa13.96□□□□□ -0.17
PDGFB-201ENST00000331163 ATXN7L3Q14CW9 347 aaPredicted RBP13.96□□□□□ -0.17
PDGFB-201ENST00000331163 CLVS2Q5SYC1 327 aa13.96□□□□□ -0.17
PDGFB-201ENST00000331163 GLYATL3Q5SZD4 288 aa13.96□□□□□ -0.17
PDGFB-201ENST00000331163 DND1Q8IYX4 353 aaKnown RBP13.96□□□□□ -0.17
PDGFB-201ENST00000331163 LRRC75AQ8NAA5 344 aa13.96□□□□□ -0.17
PDGFB-201ENST00000331163 YIPF5Q969M3 257 aa13.96□□□□□ -0.17
PDGFB-201ENST00000331163 NBEAQ8NFP9 2946 aa13.96□□□□□ -0.17
PDGFB-201ENST00000331163 ZNF462Q96JM2 2506 aa13.96□□□□□ -0.17
PDGFB-201ENST00000331163 ZNF878C9JN71 531 aa13.96□□□□□ -0.18
PDGFB-201ENST00000331163 PMS2P2O95744 297 aa13.96□□□□□ -0.18
PDGFB-201ENST00000331163 ADRB1P08588 477 aa13.96□□□□□ -0.18
PDGFB-201ENST00000331163 SRMP19623 302 aa13.96□□□□□ -0.18
PDGFB-201ENST00000331163 SLC36A2Q495M3 483 aa13.96□□□□□ -0.18
PDGFB-201ENST00000331163 KIAA2026Q5HYC2 2103 aa13.96□□□□□ -0.18
PDGFB-201ENST00000331163 VWA1Q6PCB0 445 aa13.96□□□□□ -0.18
PDGFB-201ENST00000331163 PRR7Q8TB68 274 aa13.96□□□□□ -0.18
PDGFB-201ENST00000331163 ACOT12Q8WYK0 555 aa13.96□□□□□ -0.18
PDGFB-201ENST00000331163 PAPOLGQ9BWT3 736 aaKnown RBP13.96□□□□□ -0.18
PDGFB-201ENST00000331163 LIN7BQ9HAP6 207 aa13.96□□□□□ -0.18
PDGFB-201ENST00000331163 PCDHB16Q9NRJ7 776 aa13.96□□□□□ -0.18
PDGFB-201ENST00000331163 GPR173Q9NS66 373 aa13.96□□□□□ -0.18
PDGFB-201ENST00000331163 MEIKINA0A087WXM9 373 aa13.95□□□□□ -0.18
PDGFB-201ENST00000331163 IGLV1-36A0A0B4J1U3 117 aa13.95□□□□□ -0.18
PDGFB-201ENST00000331163 C7orf66A4D0T2 115 aa13.95□□□□□ -0.18
PDGFB-201ENST00000331163 CXCL2P19875 107 aa13.95□□□□□ -0.18
PDGFB-201ENST00000331163 TGFBR3Q03167 851 aa13.95□□□□□ -0.18
PDGFB-201ENST00000331163 ZNF454Q8N9F8 522 aa13.95□□□□□ -0.18
PDGFB-201ENST00000331163 ZNF519Q8TB69 540 aa13.95□□□□□ -0.18
PDGFB-201ENST00000331163 LGALS14Q8TCE9 139 aa13.95□□□□□ -0.18
PDGFB-201ENST00000331163 BANF2Q9H503 90 aa13.95□□□□□ -0.18
PDGFB-201ENST00000331163 FAM90A27PA6NNH2 459 aa13.95□□□□□ -0.18
PDGFB-201ENST00000331163 PEX14O75381 377 aa13.95□□□□□ -0.18
PDGFB-201ENST00000331163 MPIG6BO95866 241 aa13.95□□□□□ -0.18
PDGFB-201ENST00000331163 ONECUT2O95948 504 aa13.95□□□□□ -0.18
PDGFB-201ENST00000331163 LRRC37A5PQ49AS3 106 aa13.95□□□□□ -0.18
PDGFB-201ENST00000331163 AKIRIN2Q53H80 203 aa13.95□□□□□ -0.18
PDGFB-201ENST00000331163 TMEM88Q6PEY1 159 aa13.95□□□□□ -0.18
PDGFB-201ENST00000331163 ZNF704Q6ZNC4 412 aaPredicted RBP13.95□□□□□ -0.18
PDGFB-201ENST00000331163 PBOV1Q9GZY1 135 aa13.95□□□□□ -0.18
PDGFB-201ENST00000331163 EXOGQ9Y2C4 368 aaKnown RBP13.95□□□□□ -0.18
PDGFB-201ENST00000331163 HIVEP3Q5T1R4 2406 aa13.95□□□□□ -0.18
PDGFB-201ENST00000331163 NTF4P34130 210 aa13.95□□□□□ -0.18
PDGFB-201ENST00000331163 APLNRP35414 380 aa13.95□□□□□ -0.18
PDGFB-201ENST00000331163 SLC25A1P53007 311 aa13.95□□□□□ -0.18
PDGFB-201ENST00000331163 Q499Y3 187 aa13.95□□□□□ -0.18
PDGFB-201ENST00000331163 BEX5Q5H9J7 111 aa13.95□□□□□ -0.18
PDGFB-201ENST00000331163 MRPL21Q7Z2W9 205 aaKnown RBP13.95□□□□□ -0.18
PDGFB-201ENST00000331163 CDH20Q9HBT6 801 aa13.95□□□□□ -0.18
PDGFB-201ENST00000331163 COPZ2Q9P299 210 aa13.95□□□□□ -0.18
PDGFB-201ENST00000331163 ATXN7O15265 892 aaPredicted RBP13.94□□□□□ -0.18
PDGFB-201ENST00000331163 ATF1P18846 271 aa13.94□□□□□ -0.18
PDGFB-201ENST00000331163 LHX2P50458 406 aa13.94□□□□□ -0.18
PDGFB-201ENST00000331163 IGFBP7Q16270 282 aa13.94□□□□□ -0.18
PDGFB-201ENST00000331163 TMEM255AQ5JRV8 349 aa13.94□□□□□ -0.18
PDGFB-201ENST00000331163 AWAT2Q6E213 333 aa13.94□□□□□ -0.18
PDGFB-201ENST00000331163 GGNQ86UU5 652 aa13.94□□□□□ -0.18
PDGFB-201ENST00000331163 PIGLQ9Y2B2 252 aa13.94□□□□□ -0.18
PDGFB-201ENST00000331163 CYC1P08574 325 aa13.94□□□□□ -0.18
PDGFB-201ENST00000331163 ZNF273Q14593 569 aa13.94□□□□□ -0.18
PDGFB-201ENST00000331163 FJX1Q86VR8 437 aa13.94□□□□□ -0.18
PDGFB-201ENST00000331163 CXorf67Q86X51 503 aaPredicted RBP13.94□□□□□ -0.18
PDGFB-201ENST00000331163 OR56B4Q8NH76 319 aa13.94□□□□□ -0.18
PDGFB-201ENST00000331163 NELFAQ9H3P2 528 aa13.94□□□□□ -0.18
PDGFB-201ENST00000331163 TRAV8-7A0A075B6U6 113 aa13.94□□□□□ -0.18
PDGFB-201ENST00000331163 FIGNL2A6NMB9 653 aa13.94□□□□□ -0.18
PDGFB-201ENST00000331163 ANGPTL7O43827 346 aa13.94□□□□□ -0.18
PDGFB-201ENST00000331163 SERPINA2P20848 420 aa13.94□□□□□ -0.18
PDGFB-201ENST00000331163 NFYAP23511 347 aaPredicted RBP13.94□□□□□ -0.18
PDGFB-201ENST00000331163 MTNR1BP49286 362 aa13.94□□□□□ -0.18
PDGFB-201ENST00000331163 ZNF83P51522 516 aa13.94□□□□□ -0.18
PDGFB-201ENST00000331163 FOXF2Q12947 444 aa13.94□□□□□ -0.18
PDGFB-201ENST00000331163 CD200R1LQ6Q8B3 271 aa13.94□□□□□ -0.18
PDGFB-201ENST00000331163 WFDC8Q8IUA0 241 aa13.94□□□□□ -0.18
PDGFB-201ENST00000331163 SKA3Q8IX90 412 aa13.94□□□□□ -0.18
PDGFB-201ENST00000331163 OR52I2Q8NH67 350 aa13.94□□□□□ -0.18
PDGFB-201ENST00000331163 HIST1H2AAQ96QV6 131 aa13.94□□□□□ -0.18
PDGFB-201ENST00000331163 INPP5EQ9NRR6 644 aa13.94□□□□□ -0.18
PDGFB-201ENST00000331163 MLXQ9UH92 298 aa13.94□□□□□ -0.18
PDGFB-201ENST00000331163 V9GY05 133 aa13.94□□□□□ -0.18
PDGFB-201ENST00000331163 RP2O75695 350 aa13.93□□□□□ -0.18
PDGFB-201ENST00000331163 IGHA1P01876 353 aa13.93□□□□□ -0.18
PDGFB-201ENST00000331163 C4BPBP20851 252 aa13.93□□□□□ -0.18
PDGFB-201ENST00000331163 HLXQ14774 488 aaPredicted RBP13.93□□□□□ -0.18
PDGFB-201ENST00000331163 TNFAIP8L1Q8WVP5 186 aa13.93□□□□□ -0.18
PDGFB-201ENST00000331163 NOX3Q9HBY0 568 aa13.93□□□□□ -0.18
PDGFB-201ENST00000331163 LHFPL6Q9Y693 200 aa13.93□□□□□ -0.18
PDGFB-201ENST00000331163 ZFHX4Q86UP3 3567 aa13.93□□□□□ -0.18
PDGFB-201ENST00000331163 POLQO75417 2590 aa13.93□□□□□ -0.18
PDGFB-201ENST00000331163 TRAV18A0A075B6X5 111 aa13.93□□□□□ -0.18
PDGFB-201ENST00000331163 SULT1A3P0DMM9 295 aa13.93□□□□□ -0.18
PDGFB-201ENST00000331163 SULT1A4P0DMN0 295 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms