RNA–Protein interactions for RNA: ENST00000330295.9

CTHRC1-201, Transcript of collagen triple helix repeat containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTHRC1, Length 1,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1-201ENST00000330295 CTSZQ9UBR2 303 aa12.03□□□□□ -0.48
CTHRC1-201ENST00000330295 POMPQ9Y244 141 aa12.03□□□□□ -0.48
CTHRC1-201ENST00000330295 COA3Q9Y2R0 106 aaPredicted RBP12.03□□□□□ -0.48
CTHRC1-201ENST00000330295 FRAS1Q86XX4 4008 aa12.02□□□□□ -0.48
CTHRC1-201ENST00000330295 A0A1B0GVI7 797 aa12.02□□□□□ -0.49
CTHRC1-201ENST00000330295 ARRDC5A6NEK1 342 aa12.02□□□□□ -0.49
CTHRC1-201ENST00000330295 NPFFO15130 113 aa12.02□□□□□ -0.49
CTHRC1-201ENST00000330295 SGCEO43556 437 aa12.02□□□□□ -0.49
CTHRC1-201ENST00000330295 CIB2O75838 187 aa12.02□□□□□ -0.49
CTHRC1-201ENST00000330295 IFNGP01579 166 aa12.02□□□□□ -0.49
CTHRC1-201ENST00000330295 HLA-DQA2P01906 255 aa12.02□□□□□ -0.49
CTHRC1-201ENST00000330295 COX5BP10606 129 aa12.02□□□□□ -0.49
CTHRC1-201ENST00000330295 EEF1B2P24534 225 aaKnown RBP12.02□□□□□ -0.49
CTHRC1-201ENST00000330295 CDKN2AP42771 156 aaKnown RBP12.02□□□□□ -0.49
CTHRC1-201ENST00000330295 FXYD6P3P58550 94 aa12.02□□□□□ -0.49
CTHRC1-201ENST00000330295 HABP2Q14520 560 aaPredicted RBP12.02□□□□□ -0.49
CTHRC1-201ENST00000330295 CRIP3Q6Q6R5 217 aa12.02□□□□□ -0.49
CTHRC1-201ENST00000330295 METAP1DQ6UB28 335 aaPredicted RBP12.02□□□□□ -0.49
CTHRC1-201ENST00000330295 ATG16L2Q8NAA4 619 aa12.02□□□□□ -0.49
CTHRC1-201ENST00000330295 OR2T33Q8NG76 320 aa12.02□□□□□ -0.49
CTHRC1-201ENST00000330295 AKR7LQ8NHP1 331 aa12.02□□□□□ -0.49
CTHRC1-201ENST00000330295 MEGF10Q96KG7 1140 aa12.02□□□□□ -0.49
CTHRC1-201ENST00000330295 NMNAT3Q96T66 252 aa12.02□□□□□ -0.49
CTHRC1-201ENST00000330295 CADM1Q9BY67 442 aaKnown RBP12.02□□□□□ -0.49
CTHRC1-201ENST00000330295 SRA1Q9HD15 236 aaKnown RBP12.02□□□□□ -0.49
CTHRC1-201ENST00000330295 EMC7Q9NPA0 242 aa12.02□□□□□ -0.49
CTHRC1-201ENST00000330295 IL20Q9NYY1 176 aa12.02□□□□□ -0.49
CTHRC1-201ENST00000330295 DNAJB9Q9UBS3 223 aa12.02□□□□□ -0.49
CTHRC1-201ENST00000330295 LSM4Q9Y4Z0 139 aaKnown RBP12.02□□□□□ -0.49
CTHRC1-201ENST00000330295 KPTNQ9Y664 436 aa12.02□□□□□ -0.49
CTHRC1-201ENST00000330295 FKBP6O75344 327 aa12.01□□□□□ -0.49
CTHRC1-201ENST00000330295 HIST1H1CP16403 213 aaKnown RBP12.01□□□□□ -0.49
CTHRC1-201ENST00000330295 TUBG1P23258 451 aa12.01□□□□□ -0.49
CTHRC1-201ENST00000330295 CBX1P83916 185 aa12.01□□□□□ -0.49
CTHRC1-201ENST00000330295 GUCA2AQ02747 115 aa12.01□□□□□ -0.49
CTHRC1-201ENST00000330295 PPP1R8Q12972 351 aaKnown RBP12.01□□□□□ -0.49
CTHRC1-201ENST00000330295 ENDOGQ14249 297 aaKnown RBP12.01□□□□□ -0.49
CTHRC1-201ENST00000330295 CDONQ4KMG0 1287 aa12.01□□□□□ -0.49
CTHRC1-201ENST00000330295 TCTEX1D4Q5JR98 221 aa12.01□□□□□ -0.49
CTHRC1-201ENST00000330295 SLC35F1Q5T1Q4 408 aa12.01□□□□□ -0.49
CTHRC1-201ENST00000330295 C1orf146Q5VVC0 180 aa12.01□□□□□ -0.49
CTHRC1-201ENST00000330295 ZNF770Q6IQ21 691 aaPredicted RBP12.01□□□□□ -0.49
CTHRC1-201ENST00000330295 CD300LDQ6UXZ3 194 aa12.01□□□□□ -0.49
CTHRC1-201ENST00000330295 PTCHD4Q6ZW05 846 aa12.01□□□□□ -0.49
CTHRC1-201ENST00000330295 MOGAT3Q86VF5 341 aa12.01□□□□□ -0.49
CTHRC1-201ENST00000330295 C19orf18Q8NEA5 215 aa12.01□□□□□ -0.49
CTHRC1-201ENST00000330295 OR2AJ1Q8NGZ0 328 aa12.01□□□□□ -0.49
CTHRC1-201ENST00000330295 OR2T4Q8NH00 348 aa12.01□□□□□ -0.49
CTHRC1-201ENST00000330295 TEX47Q8TBZ9 253 aa12.01□□□□□ -0.49
CTHRC1-201ENST00000330295 COG8Q96MW5 612 aa12.01□□□□□ -0.49
CTHRC1-201ENST00000330295 RCHY1Q96PM5 261 aa12.01□□□□□ -0.49
CTHRC1-201ENST00000330295 DDOQ99489 341 aa12.01□□□□□ -0.49
CTHRC1-201ENST00000330295 SSX3Q99909 188 aa12.01□□□□□ -0.49
CTHRC1-201ENST00000330295 TSSK6Q9BXA6 273 aa12.01□□□□□ -0.49
CTHRC1-201ENST00000330295 WNT5BQ9H1J7 359 aa12.01□□□□□ -0.49
CTHRC1-201ENST00000330295 EGLN3Q9H6Z9 239 aa12.01□□□□□ -0.49
CTHRC1-201ENST00000330295 ZNF702PQ9H963 129 aa12.01□□□□□ -0.49
CTHRC1-201ENST00000330295 SMURF1Q9HCE7 757 aa12.01□□□□□ -0.49
CTHRC1-201ENST00000330295 RPRD1BQ9NQG5 326 aaKnown RBP12.01□□□□□ -0.49
CTHRC1-201ENST00000330295 TUBG2Q9NRH3 451 aa12.01□□□□□ -0.49
CTHRC1-201ENST00000330295 B9D1Q9UPM9 204 aa12.01□□□□□ -0.49
CTHRC1-201ENST00000330295 IGHV3-64DA0A0J9YX35 117 aa12□□□□□ -0.49
CTHRC1-201ENST00000330295 A0A1W2PRD5 423 aa12□□□□□ -0.49
CTHRC1-201ENST00000330295 A0A1W2PRF3 423 aa12□□□□□ -0.49
CTHRC1-201ENST00000330295 A0A1W2PRM7 423 aa12□□□□□ -0.49
CTHRC1-201ENST00000330295 TCRBV3S1A0A5B6 114 aa12□□□□□ -0.49
CTHRC1-201ENST00000330295 RIIAD1A6NNX1 92 aa12□□□□□ -0.49
CTHRC1-201ENST00000330295 H3BN98 237 aa12□□□□□ -0.49
CTHRC1-201ENST00000330295 DOK2O60496 412 aa12□□□□□ -0.49
CTHRC1-201ENST00000330295 ABHD16AO95870 558 aa12□□□□□ -0.49
CTHRC1-201ENST00000330295 ANXA8P13928 327 aa12□□□□□ -0.49
CTHRC1-201ENST00000330295 SAA4P35542 130 aa12□□□□□ -0.49
CTHRC1-201ENST00000330295 HTR5AP47898 357 aa12□□□□□ -0.49
CTHRC1-201ENST00000330295 SRP9P49458 86 aaKnown RBP12□□□□□ -0.49
CTHRC1-201ENST00000330295 KHDRBS1Q07666 443 aaKnown RBP eCLIP12□□□□□ -0.49
CTHRC1-201ENST00000330295 KCNMB1Q16558 191 aa12□□□□□ -0.49
CTHRC1-201ENST00000330295 CCDC121Q6ZUS5 278 aa12□□□□□ -0.49
CTHRC1-201ENST00000330295 BEND2Q8NDZ0 799 aa12□□□□□ -0.49
CTHRC1-201ENST00000330295 PROKR2Q8NFJ6 384 aa12□□□□□ -0.49
CTHRC1-201ENST00000330295 GJC3Q8NFK1 279 aa12□□□□□ -0.49
CTHRC1-201ENST00000330295 OR10AD1Q8NGE0 317 aa12□□□□□ -0.49
CTHRC1-201ENST00000330295 C4orf45Q96LM5 186 aa12□□□□□ -0.49
CTHRC1-201ENST00000330295 FEVQ99581 238 aa12□□□□□ -0.49
CTHRC1-201ENST00000330295 DCTN5Q9BTE1 182 aa12□□□□□ -0.49
CTHRC1-201ENST00000330295 FAM234AQ9H0X4 552 aa12□□□□□ -0.49
CTHRC1-201ENST00000330295 POFUT1Q9H488 388 aa12□□□□□ -0.49
CTHRC1-201ENST00000330295 ATPIF1Q9UII2 106 aa12□□□□□ -0.49
CTHRC1-201ENST00000330295 KCNG2Q9UJ96 466 aa12□□□□□ -0.49
CTHRC1-201ENST00000330295 MEIOCA2RUB1 952 aa11.99□□□□□ -0.49
CTHRC1-201ENST00000330295 MEGF11A6BM72 1044 aa11.99□□□□□ -0.49
CTHRC1-201ENST00000330295 OR6C6A6NF89 314 aa11.99□□□□□ -0.49
CTHRC1-201ENST00000330295 CHST1O43916 411 aa11.99□□□□□ -0.49
CTHRC1-201ENST00000330295 CCDC159P0C7I6 412 aa11.99□□□□□ -0.49
CTHRC1-201ENST00000330295 ZNF823P16415 610 aa11.99□□□□□ -0.49
CTHRC1-201ENST00000330295 PMELP40967 661 aa11.99□□□□□ -0.49
CTHRC1-201ENST00000330295 RGS6P49758 472 aa11.99□□□□□ -0.49
CTHRC1-201ENST00000330295 BLVRAP53004 296 aa11.99□□□□□ -0.49
CTHRC1-201ENST00000330295 CD83Q01151 205 aa11.99□□□□□ -0.49
CTHRC1-201ENST00000330295 PRB3Q04118 309 aaPredicted RBP11.99□□□□□ -0.49
CTHRC1-201ENST00000330295 ZSCAN2Q7Z7L9 614 aaPredicted RBP11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms