RNA–Protein interactions for RNA: ENST00000330188.13

TPM3-206, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-206ENST00000330188 DBHP09172 617 aa12.77□□□□□ -0.36
TPM3-206ENST00000330188 FAHP16930 419 aa12.77□□□□□ -0.36
TPM3-206ENST00000330188 MPGP29372 298 aa12.77□□□□□ -0.36
TPM3-206ENST00000330188 UBE2V2Q15819 145 aa12.77□□□□□ -0.36
TPM3-206ENST00000330188 PNLIPRP3Q17RR3 467 aa12.77□□□□□ -0.36
TPM3-206ENST00000330188 MICBQ29980 383 aa12.77□□□□□ -0.36
TPM3-206ENST00000330188 DCAF12Q5T6F0 453 aa12.77□□□□□ -0.36
TPM3-206ENST00000330188 FAHD2BQ6P2I3 314 aaPredicted RBP12.77□□□□□ -0.36
TPM3-206ENST00000330188 ALKAL2Q6UX46 152 aa12.77□□□□□ -0.36
TPM3-206ENST00000330188 C1QL2Q7Z5L3 287 aa12.77□□□□□ -0.36
TPM3-206ENST00000330188 GGNQ86UU5 652 aa12.77□□□□□ -0.36
TPM3-206ENST00000330188 PNLDC1Q8NA58 520 aaKnown RBP12.77□□□□□ -0.36
TPM3-206ENST00000330188 ADAD2Q8NCV1 583 aaKnown RBP12.77□□□□□ -0.36
TPM3-206ENST00000330188 OR5D18Q8NGL1 313 aa12.77□□□□□ -0.36
TPM3-206ENST00000330188 SCARB1Q8WTV0 552 aa12.77□□□□□ -0.36
TPM3-206ENST00000330188 MITD1Q8WV92 249 aa12.77□□□□□ -0.36
TPM3-206ENST00000330188 ST8SIA4Q92187 359 aa12.77□□□□□ -0.36
TPM3-206ENST00000330188 ZNF775Q96BV0 537 aaPredicted RBP12.77□□□□□ -0.36
TPM3-206ENST00000330188 ZNF799Q96GE5 643 aa12.77□□□□□ -0.36
TPM3-206ENST00000330188 FAHD2AQ96GK7 314 aa12.77□□□□□ -0.36
TPM3-206ENST00000330188 ARHGAP5-AS1Q96IT6 56 aa12.77□□□□□ -0.36
TPM3-206ENST00000330188 URM1Q9BTM9 101 aaKnown RBP12.77□□□□□ -0.36
TPM3-206ENST00000330188 OR5H14A6NHG9 310 aa12.77□□□□□ -0.37
TPM3-206ENST00000330188 EFSO43281 561 aa12.77□□□□□ -0.37
TPM3-206ENST00000330188 CRYZL1O95825 349 aa12.77□□□□□ -0.37
TPM3-206ENST00000330188 ZNF250P15622 560 aa12.77□□□□□ -0.37
TPM3-206ENST00000330188 HLA-GP17693 338 aa12.77□□□□□ -0.37
TPM3-206ENST00000330188 CALCRP30988 508 aa12.77□□□□□ -0.37
TPM3-206ENST00000330188 PTGFRP43088 359 aa12.77□□□□□ -0.37
TPM3-206ENST00000330188 ALDH3B1P43353 468 aa12.77□□□□□ -0.37
TPM3-206ENST00000330188 RPS27AP62979 156 aaKnown RBP12.77□□□□□ -0.37
TPM3-206ENST00000330188 IL13RA1P78552 427 aa12.77□□□□□ -0.37
TPM3-206ENST00000330188 MRPS34P82930 218 aaKnown RBP12.77□□□□□ -0.37
TPM3-206ENST00000330188 GK2Q14410 553 aaPredicted RBP12.77□□□□□ -0.37
TPM3-206ENST00000330188 FAM189A2Q15884 450 aa12.77□□□□□ -0.37
TPM3-206ENST00000330188 LPAL2Q16609 132 aa12.77□□□□□ -0.37
TPM3-206ENST00000330188 HOGA1Q86XE5 327 aa12.77□□□□□ -0.37
TPM3-206ENST00000330188 FAM89BQ8N5H3 189 aa12.77□□□□□ -0.37
TPM3-206ENST00000330188 OR6K3Q8NGY3 331 aa12.77□□□□□ -0.37
TPM3-206ENST00000330188 CHST5Q9GZS9 411 aa12.77□□□□□ -0.37
TPM3-206ENST00000330188 OR10A2Q9H208 303 aa12.77□□□□□ -0.37
TPM3-206ENST00000330188 PLEK2Q9NYT0 353 aa12.77□□□□□ -0.37
TPM3-206ENST00000330188 PADI1Q9ULC6 663 aa12.77□□□□□ -0.37
TPM3-206ENST00000330188 LRRC3CA6NJW4 275 aa12.76□□□□□ -0.37
TPM3-206ENST00000330188 FOXI3A8MTJ6 420 aaPredicted RBP12.76□□□□□ -0.37
TPM3-206ENST00000330188 STMND1H3BQB6 276 aa12.76□□□□□ -0.37
TPM3-206ENST00000330188 NMBP08949 121 aa12.76□□□□□ -0.37
TPM3-206ENST00000330188 NAT2P11245 290 aa12.76□□□□□ -0.37
TPM3-206ENST00000330188 ICAM2P13598 275 aa12.76□□□□□ -0.37
TPM3-206ENST00000330188 NTF4P34130 210 aa12.76□□□□□ -0.37
TPM3-206ENST00000330188 FGL1Q08830 312 aa12.76□□□□□ -0.37
TPM3-206ENST00000330188 RSPO4Q2I0M5 234 aaPredicted RBP12.76□□□□□ -0.37
TPM3-206ENST00000330188 VAX1Q5SQQ9 334 aa12.76□□□□□ -0.37
TPM3-206ENST00000330188 FAM27BQ5VT28 67 aa12.76□□□□□ -0.37
TPM3-206ENST00000330188 LIN54Q6MZP7 749 aa12.76□□□□□ -0.37
TPM3-206ENST00000330188 H3F3CQ6NXT2 135 aa12.76□□□□□ -0.37
TPM3-206ENST00000330188 TMEM65Q6PI78 240 aa12.76□□□□□ -0.37
TPM3-206ENST00000330188 TIPARPQ7Z3E1 657 aaKnown RBP12.76□□□□□ -0.37
TPM3-206ENST00000330188 ZNF546Q86UE3 836 aa12.76□□□□□ -0.37
TPM3-206ENST00000330188 OR14L1PQ8NHC6 308 aa12.76□□□□□ -0.37
TPM3-206ENST00000330188 MARCH1Q8TCQ1 289 aa12.76□□□□□ -0.37
TPM3-206ENST00000330188 CT55Q8WUE5 264 aa12.76□□□□□ -0.37
TPM3-206ENST00000330188 KCNE4Q8WWG9 221 aa12.76□□□□□ -0.37
TPM3-206ENST00000330188 PP6455Q8WZ26 134 aa12.76□□□□□ -0.37
TPM3-206ENST00000330188 FBXW5Q969U6 566 aa12.76□□□□□ -0.37
TPM3-206ENST00000330188 OCSTAMPQ9BR26 566 aa12.76□□□□□ -0.37
TPM3-206ENST00000330188 PDCD10Q9BUL8 212 aa12.76□□□□□ -0.37
TPM3-206ENST00000330188 RYDENQ9NUL5 291 aaKnown RBP12.76□□□□□ -0.37
TPM3-206ENST00000330188 GHRLQ9UBU3 117 aa12.76□□□□□ -0.37
TPM3-206ENST00000330188 LOXL2Q9Y4K0 774 aa12.76□□□□□ -0.37
TPM3-206ENST00000330188 FRYLO94915 3013 aa12.76□□□□□ -0.37
TPM3-206ENST00000330188 hCG_1807616A0A1W2PRN6 198 aa12.76□□□□□ -0.37
TPM3-206ENST00000330188 HPP00738 406 aa12.76□□□□□ -0.37
TPM3-206ENST00000330188 RFPL3SP0C7P2 107 aa12.76□□□□□ -0.37
TPM3-206ENST00000330188 TCN2P20062 427 aa12.76□□□□□ -0.37
TPM3-206ENST00000330188 AGTR1P30556 359 aa12.76□□□□□ -0.37
TPM3-206ENST00000330188 SIGLEC14Q08ET2 396 aa12.76□□□□□ -0.37
TPM3-206ENST00000330188 ACTBL2Q562R1 376 aa12.76□□□□□ -0.37
TPM3-206ENST00000330188 ZNF660Q6AZW8 331 aaPredicted RBP12.76□□□□□ -0.37
TPM3-206ENST00000330188 OR51T1Q8NGJ9 327 aa12.76□□□□□ -0.37
TPM3-206ENST00000330188 COQ8AQ8NI60 647 aa12.76□□□□□ -0.37
TPM3-206ENST00000330188 SLC39A7Q92504 469 aa12.76□□□□□ -0.37
TPM3-206ENST00000330188 SPTSSAQ969W0 71 aa12.76□□□□□ -0.37
TPM3-206ENST00000330188 PHB2Q99623 299 aa12.76□□□□□ -0.37
TPM3-206ENST00000330188 REG4Q9BYZ8 158 aa12.76□□□□□ -0.37
TPM3-206ENST00000330188 RDH8Q9NYR8 311 aa12.76□□□□□ -0.37
TPM3-206ENST00000330188 PIGLQ9Y2B2 252 aa12.76□□□□□ -0.37
TPM3-206ENST00000330188 PMS2P1A4D2B8 440 aa12.75□□□□□ -0.37
TPM3-206ENST00000330188 APOC1P02654 83 aa12.75□□□□□ -0.37
TPM3-206ENST00000330188 SLC25A4P12235 298 aa12.75□□□□□ -0.37
TPM3-206ENST00000330188 AKR1C4P17516 323 aa12.75□□□□□ -0.37
TPM3-206ENST00000330188 CRYGSP22914 178 aa12.75□□□□□ -0.37
TPM3-206ENST00000330188 CARD18P57730 90 aa12.75□□□□□ -0.37
TPM3-206ENST00000330188 SNAI3Q3KNW1 292 aa12.75□□□□□ -0.37
TPM3-206ENST00000330188 TCEAL6Q6IPX3 200 aa12.75□□□□□ -0.37
TPM3-206ENST00000330188 RGS7BPQ6MZT1 257 aaPredicted RBP12.75□□□□□ -0.37
TPM3-206ENST00000330188 C6orf15Q6UXA7 325 aaPredicted RBP12.75□□□□□ -0.37
TPM3-206ENST00000330188 SLC51BQ86UW2 128 aa12.75□□□□□ -0.37
TPM3-206ENST00000330188 ESX1Q8N693 406 aa12.75□□□□□ -0.37
TPM3-206ENST00000330188 TERB2Q8NHR7 220 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms