RNA–Protein interactions for RNA: ENST00000328560.12

ATP2C1-201, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 1 (best) BASIC

Gene ATP2C1, Length 3,484 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-201ENST00000328560 HLA-BQ31612 363 aa12.39□□□□□ -0.43
ATP2C1-201ENST00000328560 NKAPLQ5M9Q1 402 aa12.39□□□□□ -0.43
ATP2C1-201ENST00000328560 BHLHE23Q8NDY6 225 aa12.39□□□□□ -0.43
ATP2C1-201ENST00000328560 URM1Q9BTM9 101 aaKnown RBP12.39□□□□□ -0.43
ATP2C1-201ENST00000328560 SEMA5BQ9P283 1151 aa12.39□□□□□ -0.43
ATP2C1-201ENST00000328560 MYO7BQ6PIF6 2116 aa12.39□□□□□ -0.43
ATP2C1-201ENST00000328560 IGLV3-12A0A075B6K2 115 aa12.39□□□□□ -0.43
ATP2C1-201ENST00000328560 IGHV5-10-1A0A0J9YXX1 117 aa12.39□□□□□ -0.43
ATP2C1-201ENST00000328560 NPIPB13A6NJU9 1138 aa12.39□□□□□ -0.43
ATP2C1-201ENST00000328560 NPIPB4C9JG80 1138 aa12.39□□□□□ -0.43
ATP2C1-201ENST00000328560 HOXB5P09067 269 aa12.39□□□□□ -0.43
ATP2C1-201ENST00000328560 SLC25A4P12235 298 aa12.39□□□□□ -0.43
ATP2C1-201ENST00000328560 RIPPLY1Q0D2K3 151 aa12.39□□□□□ -0.43
ATP2C1-201ENST00000328560 ZNF273Q14593 569 aa12.39□□□□□ -0.43
ATP2C1-201ENST00000328560 SLC25A47Q6Q0C1 308 aa12.39□□□□□ -0.43
ATP2C1-201ENST00000328560 WDSUB1Q8N9V3 476 aa12.39□□□□□ -0.43
ATP2C1-201ENST00000328560 PNLDC1Q8NA58 520 aaKnown RBP12.39□□□□□ -0.43
ATP2C1-201ENST00000328560 LHFPL5Q8TAF8 219 aa12.39□□□□□ -0.43
ATP2C1-201ENST00000328560 FBXW5Q969U6 566 aa12.39□□□□□ -0.43
ATP2C1-201ENST00000328560 ACKR4Q9NPB9 350 aa12.39□□□□□ -0.43
ATP2C1-201ENST00000328560 PCDHB10Q9UN67 800 aa12.39□□□□□ -0.43
ATP2C1-201ENST00000328560 C9J4A7 227 aa12.38□□□□□ -0.43
ATP2C1-201ENST00000328560 SCGNO76038 276 aa12.38□□□□□ -0.43
ATP2C1-201ENST00000328560 ZNF17P17021 662 aa12.38□□□□□ -0.43
ATP2C1-201ENST00000328560 S100A10P60903 97 aa12.38□□□□□ -0.43
ATP2C1-201ENST00000328560 PAN3Q58A45 887 aaKnown RBP12.38□□□□□ -0.43
ATP2C1-201ENST00000328560 GTPBP8Q8N3Z3 284 aaPredicted RBP12.38□□□□□ -0.43
ATP2C1-201ENST00000328560 TMED6Q8WW62 240 aa12.38□□□□□ -0.43
ATP2C1-201ENST00000328560 WNT2BQ93097 391 aa12.38□□□□□ -0.43
ATP2C1-201ENST00000328560 OR10A2Q9H208 303 aa12.38□□□□□ -0.43
ATP2C1-201ENST00000328560 EHFQ9NZC4 300 aa12.38□□□□□ -0.43
ATP2C1-201ENST00000328560 IGKV1-9A0A0C4DH69 117 aa12.38□□□□□ -0.43
ATP2C1-201ENST00000328560 IL2RAP01589 272 aa12.38□□□□□ -0.43
ATP2C1-201ENST00000328560 CRHP06850 196 aa12.38□□□□□ -0.43
ATP2C1-201ENST00000328560 SFTPBP07988 381 aa12.38□□□□□ -0.43
ATP2C1-201ENST00000328560 DBHP09172 617 aa12.38□□□□□ -0.43
ATP2C1-201ENST00000328560 FCGR2AP12318 317 aa12.38□□□□□ -0.43
ATP2C1-201ENST00000328560 GLRA1P23415 457 aa12.38□□□□□ -0.43
ATP2C1-201ENST00000328560 CSNK1A1P48729 337 aa12.38□□□□□ -0.43
ATP2C1-201ENST00000328560 PPIAP62937 165 aaKnown RBP12.38□□□□□ -0.43
ATP2C1-201ENST00000328560 PGAP1Q75T13 922 aa12.38□□□□□ -0.43
ATP2C1-201ENST00000328560 TMEM200AQ86VY9 491 aa12.38□□□□□ -0.43
ATP2C1-201ENST00000328560 TMEM17Q86X19 198 aa12.38□□□□□ -0.43
ATP2C1-201ENST00000328560 HOGA1Q86XE5 327 aa12.38□□□□□ -0.43
ATP2C1-201ENST00000328560 OR6X1Q8NH79 312 aa12.38□□□□□ -0.43
ATP2C1-201ENST00000328560 UCN2Q96RP3 112 aa12.38□□□□□ -0.43
ATP2C1-201ENST00000328560 C5orf66Q9H5L9 145 aa12.38□□□□□ -0.43
ATP2C1-201ENST00000328560 SLC39A1Q9NY26 324 aa12.38□□□□□ -0.43
ATP2C1-201ENST00000328560 NCOA6Q14686 2063 aaPredicted RBP12.38□□□□□ -0.43
ATP2C1-201ENST00000328560 P2RY4P51582 365 aa12.38□□□□□ -0.43
ATP2C1-201ENST00000328560 SNU13P55769 128 aaKnown RBP12.38□□□□□ -0.43
ATP2C1-201ENST00000328560 KISS1Q15726 138 aa12.38□□□□□ -0.43
ATP2C1-201ENST00000328560 CCDC157Q569K6 752 aa12.38□□□□□ -0.43
ATP2C1-201ENST00000328560 OR56B1Q8NGI3 324 aa12.38□□□□□ -0.43
ATP2C1-201ENST00000328560 ZNF385AQ96PM9 386 aaKnown RBP12.38□□□□□ -0.43
ATP2C1-201ENST00000328560 GABRR1P24046 479 aa12.37□□□□□ -0.43
ATP2C1-201ENST00000328560 AIMP2Q13155 320 aaKnown RBP12.37□□□□□ -0.43
ATP2C1-201ENST00000328560 TMEM128Q5BJH2 165 aa12.37□□□□□ -0.43
ATP2C1-201ENST00000328560 CLEC18BQ6UXF7 455 aa12.37□□□□□ -0.43
ATP2C1-201ENST00000328560 DOK3Q7L591 496 aa12.37□□□□□ -0.43
ATP2C1-201ENST00000328560 TMEM156Q8N614 296 aa12.37□□□□□ -0.43
ATP2C1-201ENST00000328560 MOB1AQ9H8S9 216 aa12.37□□□□□ -0.43
ATP2C1-201ENST00000328560 K7ESF4 209 aa12.37□□□□□ -0.43
ATP2C1-201ENST00000328560 ZNF345Q14585 488 aa12.37□□□□□ -0.43
ATP2C1-201ENST00000328560 MOB3CQ70IA8 216 aa12.37□□□□□ -0.43
ATP2C1-201ENST00000328560 ZC3H10Q96K80 434 aaKnown RBP12.37□□□□□ -0.43
ATP2C1-201ENST00000328560 PLEK2Q9NYT0 353 aa12.37□□□□□ -0.43
ATP2C1-201ENST00000328560 TMEM265A0A087WTH1 108 aa12.36□□□□□ -0.43
ATP2C1-201ENST00000328560 FAM74A7A6NL05 159 aa12.36□□□□□ -0.43
ATP2C1-201ENST00000328560 NPIPA2E9PIF3 369 aa12.36□□□□□ -0.43
ATP2C1-201ENST00000328560 NPIPA3F8WFD2 350 aa12.36□□□□□ -0.43
ATP2C1-201ENST00000328560 GSTP1P09211 210 aaKnown RBP12.36□□□□□ -0.43
ATP2C1-201ENST00000328560 FAM74A3Q4VXF1 159 aa12.36□□□□□ -0.43
ATP2C1-201ENST00000328560 PHYHD1Q5SRE7 291 aa12.36□□□□□ -0.43
ATP2C1-201ENST00000328560 TFAP2EQ6VUC0 442 aa12.36□□□□□ -0.43
ATP2C1-201ENST00000328560 RRNAD1Q96FB5 475 aaKnown RBP12.36□□□□□ -0.43
ATP2C1-201ENST00000328560 C1orf147Q96MC9 270 aaPredicted RBP12.36□□□□□ -0.43
ATP2C1-201ENST00000328560 CDC6Q99741 560 aa12.36□□□□□ -0.43
ATP2C1-201ENST00000328560 TMEM231Q9H6L2 316 aa12.36□□□□□ -0.43
ATP2C1-201ENST00000328560 LDAHQ9H6V9 325 aa12.36□□□□□ -0.43
ATP2C1-201ENST00000328560 PTRH2Q9Y3E5 179 aaKnown RBP12.36□□□□□ -0.43
ATP2C1-201ENST00000328560 ZNF205O95201 554 aa12.36□□□□□ -0.43
ATP2C1-201ENST00000328560 GP1BAP07359 652 aa12.36□□□□□ -0.43
ATP2C1-201ENST00000328560 PNLIPP16233 465 aa12.36□□□□□ -0.43
ATP2C1-201ENST00000328560 TAS2R31P59538 309 aa12.36□□□□□ -0.43
ATP2C1-201ENST00000328560 ZNF585AQ6P3V2 769 aa12.36□□□□□ -0.43
ATP2C1-201ENST00000328560 OR5AP2Q8NGF4 316 aa12.36□□□□□ -0.43
ATP2C1-201ENST00000328560 CLDN23Q96B33 292 aa12.36□□□□□ -0.43
ATP2C1-201ENST00000328560 PNRC2Q9NPJ4 139 aaKnown RBP12.36□□□□□ -0.43
ATP2C1-201ENST00000328560 TRIM77I1YAP6 450 aa12.36□□□□□ -0.43
ATP2C1-201ENST00000328560 PTGFRP43088 359 aa12.36□□□□□ -0.43
ATP2C1-201ENST00000328560 SLC35A1P78382 337 aa12.36□□□□□ -0.43
ATP2C1-201ENST00000328560 CHRFAM7AQ494W8 412 aa12.36□□□□□ -0.43
ATP2C1-201ENST00000328560 IFI44Q8TCB0 444 aa12.36□□□□□ -0.43
ATP2C1-201ENST00000328560 MARC2Q969Z3 335 aa12.36□□□□□ -0.43
ATP2C1-201ENST00000328560 TMEM230Q96A57 120 aa12.36□□□□□ -0.43
ATP2C1-201ENST00000328560 TSNAXQ99598 290 aaKnown RBP12.36□□□□□ -0.43
ATP2C1-201ENST00000328560 GLS2Q9UI32 602 aa12.36□□□□□ -0.43
ATP2C1-201ENST00000328560 PIGLQ9Y2B2 252 aa12.36□□□□□ -0.43
ATP2C1-201ENST00000328560 FRYLO94915 3013 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms