RNA–Protein interactions for RNA: ENST00000323853.9

SNRNP200-201, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP200, Length 7,165 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-201ENST00000323853 SOX7Q9BT81 388 aa9.8□□□□□ -0.84
SNRNP200-201ENST00000323853 HOXB3P14651 431 aaPredicted RBP9.8□□□□□ -0.84
SNRNP200-201ENST00000323853 NME1P15531 152 aaKnown RBP9.8□□□□□ -0.84
SNRNP200-201ENST00000323853 LCN15Q6UWW0 184 aa9.8□□□□□ -0.84
SNRNP200-201ENST00000323853 DBX2Q6ZNG2 339 aa9.8□□□□□ -0.84
SNRNP200-201ENST00000323853 SLC25A26Q70HW3 274 aa9.8□□□□□ -0.84
SNRNP200-201ENST00000323853 THNSL2Q86YJ6 484 aa9.8□□□□□ -0.84
SNRNP200-201ENST00000323853 NECAP1Q8NC96 275 aa9.8□□□□□ -0.84
SNRNP200-201ENST00000323853 TPPP3Q9BW30 176 aa9.8□□□□□ -0.84
SNRNP200-201ENST00000323853 ATP23Q9Y6H3 246 aa9.8□□□□□ -0.84
SNRNP200-201ENST00000323853 DVL1O14640 695 aa9.79□□□□□ -0.84
SNRNP200-201ENST00000323853 TRAF3IP2O43734 574 aaPredicted RBP9.79□□□□□ -0.84
SNRNP200-201ENST00000323853 DVL1P1P54792 670 aaPredicted RBP9.79□□□□□ -0.84
SNRNP200-201ENST00000323853 ZNF141Q15928 474 aa9.79□□□□□ -0.84
SNRNP200-201ENST00000323853 UBALD2Q8IYN6 164 aa9.79□□□□□ -0.84
SNRNP200-201ENST00000323853 OR10X1Q8NGY0 326 aa9.79□□□□□ -0.84
SNRNP200-201ENST00000323853 OR2A5Q96R48 311 aa9.79□□□□□ -0.84
SNRNP200-201ENST00000323853 UBE2G1P62253 170 aa9.79□□□□□ -0.84
SNRNP200-201ENST00000323853 PRSS41Q7RTY9 318 aa9.79□□□□□ -0.84
SNRNP200-201ENST00000323853 OR52N4Q8NGI2 321 aa9.79□□□□□ -0.84
SNRNP200-201ENST00000323853 UQCC2Q9BRT2 126 aa9.79□□□□□ -0.84
SNRNP200-201ENST00000323853 CNIH1O95406 144 aa9.79□□□□□ -0.84
SNRNP200-201ENST00000323853 HNF1AP20823 631 aa9.79□□□□□ -0.84
SNRNP200-201ENST00000323853 BTNL8Q6UX41 500 aa9.79□□□□□ -0.84
SNRNP200-201ENST00000323853 PCED1AQ9H1Q7 454 aa9.79□□□□□ -0.84
SNRNP200-201ENST00000323853 IGHV3-64DA0A0J9YX35 117 aa9.79□□□□□ -0.84
SNRNP200-201ENST00000323853 TNFSF15O95150 251 aa9.79□□□□□ -0.84
SNRNP200-201ENST00000323853 CD160O95971 181 aa9.79□□□□□ -0.84
SNRNP200-201ENST00000323853 HTRA4P83105 476 aaPredicted RBP9.79□□□□□ -0.84
SNRNP200-201ENST00000323853 DUSP2Q05923 314 aa9.79□□□□□ -0.84
SNRNP200-201ENST00000323853 CADM4Q8NFZ8 388 aa9.79□□□□□ -0.84
SNRNP200-201ENST00000323853 RTN4IP1Q8WWV3 396 aaPredicted RBP9.79□□□□□ -0.84
SNRNP200-201ENST00000323853 PP6455Q8WZ26 134 aa9.79□□□□□ -0.84
SNRNP200-201ENST00000323853 TAAR9Q96RI9 348 aa9.79□□□□□ -0.84
SNRNP200-201ENST00000323853 VN1R1Q9GZP7 353 aa9.79□□□□□ -0.84
SNRNP200-201ENST00000323853 WDR1O75083 606 aa9.79□□□□□ -0.84
SNRNP200-201ENST00000323853 PRSS23O95084 383 aa9.79□□□□□ -0.84
SNRNP200-201ENST00000323853 LGALS4P56470 323 aa9.79□□□□□ -0.84
SNRNP200-201ENST00000323853 PELI1Q96FA3 418 aa9.79□□□□□ -0.84
SNRNP200-201ENST00000323853 FOXB1Q99853 325 aa9.79□□□□□ -0.84
SNRNP200-201ENST00000323853 COL9A1P20849 921 aa9.79□□□□□ -0.84
SNRNP200-201ENST00000323853 AGFG1P52594 562 aaKnown RBP9.79□□□□□ -0.84
SNRNP200-201ENST00000323853 GSG1Q2KHT4 349 aa9.79□□□□□ -0.84
SNRNP200-201ENST00000323853 CLLU1Q5K131 121 aa9.79□□□□□ -0.84
SNRNP200-201ENST00000323853 ADAM5Q6NVV9 412 aa9.79□□□□□ -0.84
SNRNP200-201ENST00000323853 ZNF547Q8IVP9 402 aa9.79□□□□□ -0.84
SNRNP200-201ENST00000323853 OR51I2Q9H344 312 aa9.79□□□□□ -0.84
SNRNP200-201ENST00000323853 RRP8O43159 456 aaKnown RBP9.78□□□□□ -0.84
SNRNP200-201ENST00000323853 CTAG2O75638 210 aa9.78□□□□□ -0.84
SNRNP200-201ENST00000323853 SCO1O75880 301 aa9.78□□□□□ -0.84
SNRNP200-201ENST00000323853 LIMS3P0CW19 117 aa9.78□□□□□ -0.84
SNRNP200-201ENST00000323853 LIMS4P0CW20 117 aa9.78□□□□□ -0.84
SNRNP200-201ENST00000323853 SLC25A6P12236 298 aa9.78□□□□□ -0.84
SNRNP200-201ENST00000323853 RFC3P40938 356 aa9.78□□□□□ -0.84
SNRNP200-201ENST00000323853 SCAND1P57086 179 aa9.78□□□□□ -0.84
SNRNP200-201ENST00000323853 HLA-BQ31612 363 aa9.78□□□□□ -0.84
SNRNP200-201ENST00000323853 CIB3Q96Q77 187 aaPredicted RBP9.78□□□□□ -0.84
SNRNP200-201ENST00000323853 PPP5D1E7EU14 171 aa9.78□□□□□ -0.84
SNRNP200-201ENST00000323853 FMODQ06828 376 aa9.78□□□□□ -0.84
SNRNP200-201ENST00000323853 CLN3Q13286 438 aa9.78□□□□□ -0.84
SNRNP200-201ENST00000323853 CDONQ4KMG0 1287 aa9.78□□□□□ -0.84
SNRNP200-201ENST00000323853 UQCC3Q6UW78 93 aa9.78□□□□□ -0.84
SNRNP200-201ENST00000323853 MAGT1Q9H0U3 335 aa9.78□□□□□ -0.84
SNRNP200-201ENST00000323853 ZNF331Q9NQX6 463 aaPredicted RBP9.78□□□□□ -0.84
SNRNP200-201ENST00000323853 FBXO34Q9NWN3 711 aa9.78□□□□□ -0.84
SNRNP200-201ENST00000323853 OR5V1Q9UGF6 321 aa9.78□□□□□ -0.84
SNRNP200-201ENST00000323853 GABRA4P48169 554 aa9.78□□□□□ -0.84
SNRNP200-201ENST00000323853 SLC39A7Q92504 469 aa9.78□□□□□ -0.84
SNRNP200-201ENST00000323853 SARAFQ96BY9 339 aa9.78□□□□□ -0.84
SNRNP200-201ENST00000323853 C12orf10Q9HB07 376 aa9.78□□□□□ -0.84
SNRNP200-201ENST00000323853 IGHV5-51A0A0C4DH38 117 aa9.78□□□□□ -0.84
SNRNP200-201ENST00000323853 H0Y8G0 127 aa9.78□□□□□ -0.84
SNRNP200-201ENST00000323853 AQP8O94778 261 aa9.78□□□□□ -0.84
SNRNP200-201ENST00000323853 SFTA3P0C7M3 94 aa9.78□□□□□ -0.84
SNRNP200-201ENST00000323853 FGF7P21781 194 aa9.78□□□□□ -0.84
SNRNP200-201ENST00000323853 ARRDC1Q8N5I2 433 aa9.78□□□□□ -0.84
SNRNP200-201ENST00000323853 MRPS24Q96EL2 167 aaKnown RBP9.78□□□□□ -0.84
SNRNP200-201ENST00000323853 CT62P0C5K7 136 aa9.78□□□□□ -0.84
SNRNP200-201ENST00000323853 HOXC8P31273 242 aa9.78□□□□□ -0.84
SNRNP200-201ENST00000323853 TAS2R45P59539 299 aa9.78□□□□□ -0.84
SNRNP200-201ENST00000323853 TLE1Q04724 770 aa9.78□□□□□ -0.84
SNRNP200-201ENST00000323853 DMWDQ09019 674 aa9.78□□□□□ -0.84
SNRNP200-201ENST00000323853 CEACAM16Q2WEN9 425 aa9.78□□□□□ -0.84
SNRNP200-201ENST00000323853 PDZD11Q5EBL8 140 aa9.78□□□□□ -0.84
SNRNP200-201ENST00000323853 OR13D1Q8NGV5 346 aa9.78□□□□□ -0.84
SNRNP200-201ENST00000323853 APOBEC3DQ96AK3 386 aaPredicted RBP9.78□□□□□ -0.84
SNRNP200-201ENST00000323853 MTCH2Q9Y6C9 303 aa9.78□□□□□ -0.84
SNRNP200-201ENST00000323853 PLPP3O14495 311 aa9.78□□□□□ -0.84
SNRNP200-201ENST00000323853 PIAS2O75928 621 aa9.78□□□□□ -0.84
SNRNP200-201ENST00000323853 CD37P11049 281 aa9.78□□□□□ -0.84
SNRNP200-201ENST00000323853 SSTP61278 116 aa9.78□□□□□ -0.84
SNRNP200-201ENST00000323853 SPICQ8N5J4 248 aa9.78□□□□□ -0.84
SNRNP200-201ENST00000323853 RXFP4Q8TDU9 374 aa9.78□□□□□ -0.84
SNRNP200-201ENST00000323853 TVP23CQ96ET8 276 aa9.78□□□□□ -0.84
SNRNP200-201ENST00000323853 SFT2D2O95562 160 aa9.77□□□□□ -0.84
SNRNP200-201ENST00000323853 CDKN2AP42771 156 aaKnown RBP9.77□□□□□ -0.84
SNRNP200-201ENST00000323853 TCTN1Q2MV58 587 aa9.77□□□□□ -0.84
SNRNP200-201ENST00000323853 OR8D4Q8NGM9 314 aa9.77□□□□□ -0.84
SNRNP200-201ENST00000323853 ERGIC1Q969X5 290 aa9.77□□□□□ -0.84
SNRNP200-201ENST00000323853 CLDN23Q96B33 292 aa9.77□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 112.7 ms