RNA–Protein interactions for RNA: ENST00000322344.7

PNKP-201, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PNKP, Length 2,041 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-201ENST00000322344 KISS1Q15726 138 aa19.65■□□□□ 0.74
PNKP-201ENST00000322344 TERB2Q8NHR7 220 aa19.65■□□□□ 0.74
PNKP-201ENST00000322344 ST8SIA4Q92187 359 aa19.65■□□□□ 0.74
PNKP-201ENST00000322344 RBM24Q9BX46 236 aaKnown RBP19.65■□□□□ 0.74
PNKP-201ENST00000322344 ULBP2Q9BZM5 246 aa19.65■□□□□ 0.74
PNKP-201ENST00000322344 TNFSF18Q9UNG2 199 aa19.65■□□□□ 0.74
PNKP-201ENST00000322344 FLVCR1Q9Y5Y0 555 aa19.65■□□□□ 0.74
PNKP-201ENST00000322344 A0A0J9YW62 118 aa19.64■□□□□ 0.74
PNKP-201ENST00000322344 PATE3B3GLJ2 98 aa19.64■□□□□ 0.74
PNKP-201ENST00000322344 E9PLN8 166 aa19.64■□□□□ 0.74
PNKP-201ENST00000322344 MTRF1O75570 445 aaKnown RBP19.64■□□□□ 0.74
PNKP-201ENST00000322344 HOXD11P31277 338 aaPredicted RBP19.64■□□□□ 0.74
PNKP-201ENST00000322344 MICBQ29980 383 aa19.64■□□□□ 0.74
PNKP-201ENST00000322344 PDZD9Q8IXQ8 264 aa19.64■□□□□ 0.74
PNKP-201ENST00000322344 C20orf196Q8IYI0 205 aa19.64■□□□□ 0.74
PNKP-201ENST00000322344 SPTSSAQ969W0 71 aa19.64■□□□□ 0.74
PNKP-201ENST00000322344 OR5H15A6NDH6 313 aa19.64■□□□□ 0.73
PNKP-201ENST00000322344 ZSCAN5BA6NJL1 495 aa19.64■□□□□ 0.73
PNKP-201ENST00000322344 CEACAM18A8MTB9 384 aa19.64■□□□□ 0.73
PNKP-201ENST00000322344 G3V3Y1 287 aa19.64■□□□□ 0.73
PNKP-201ENST00000322344 NAT2P11245 290 aa19.64■□□□□ 0.73
PNKP-201ENST00000322344 PTGFRP43088 359 aa19.64■□□□□ 0.73
PNKP-201ENST00000322344 MRPS34P82930 218 aaKnown RBP19.64■□□□□ 0.73
PNKP-201ENST00000322344 BAMBIQ13145 260 aa19.64■□□□□ 0.73
PNKP-201ENST00000322344 ARL6IP1Q15041 203 aa19.64■□□□□ 0.73
PNKP-201ENST00000322344 ZIC4Q8N9L1 334 aa19.64■□□□□ 0.73
PNKP-201ENST00000322344 SCGB3A2Q96PL1 93 aa19.64■□□□□ 0.73
PNKP-201ENST00000322344 A0A1B0GW55 424 aa19.63■□□□□ 0.73
PNKP-201ENST00000322344 KANTRA0A1W2PQU2 76 aa19.63■□□□□ 0.73
PNKP-201ENST00000322344 B4E171 279 aa19.63■□□□□ 0.73
PNKP-201ENST00000322344 B8ZZF3 427 aa19.63■□□□□ 0.73
PNKP-201ENST00000322344 DUX4L2P0CJ85 424 aa19.63■□□□□ 0.73
PNKP-201ENST00000322344 DUX4L3P0CJ86 424 aa19.63■□□□□ 0.73
PNKP-201ENST00000322344 DUX4L4P0CJ87 422 aa19.63■□□□□ 0.73
PNKP-201ENST00000322344 DUX4L5P0CJ88 424 aa19.63■□□□□ 0.73
PNKP-201ENST00000322344 DUX4L6P0CJ89 424 aa19.63■□□□□ 0.73
PNKP-201ENST00000322344 DUX4L7P0CJ90 424 aa19.63■□□□□ 0.73
PNKP-201ENST00000322344 ZP3P21754 424 aa19.63■□□□□ 0.73
PNKP-201ENST00000322344 VAMP1P23763 118 aa19.63■□□□□ 0.73
PNKP-201ENST00000322344 SRD5A2P31213 254 aa19.63■□□□□ 0.73
PNKP-201ENST00000322344 TSPAN7P41732 249 aa19.63■□□□□ 0.73
PNKP-201ENST00000322344 RTN4RL2Q86UN3 420 aa19.63■□□□□ 0.73
PNKP-201ENST00000322344 ADAD2Q8NCV1 583 aaKnown RBP19.63■□□□□ 0.73
PNKP-201ENST00000322344 KCNE4Q8WWG9 221 aa19.63■□□□□ 0.73
PNKP-201ENST00000322344 ARHGAP5-AS1Q96IT6 56 aa19.63■□□□□ 0.73
PNKP-201ENST00000322344 ZC3H10Q96K80 434 aaKnown RBP19.63■□□□□ 0.73
PNKP-201ENST00000322344 CXorf58Q96LI9 332 aa19.63■□□□□ 0.73
PNKP-201ENST00000322344 CHST5Q9GZS9 411 aa19.63■□□□□ 0.73
PNKP-201ENST00000322344 DUX4Q9UBX2 424 aa19.63■□□□□ 0.73
PNKP-201ENST00000322344 M0R135 149 aa19.63■□□□□ 0.73
PNKP-201ENST00000322344 CCSO14618 274 aa19.63■□□□□ 0.73
PNKP-201ENST00000322344 TNFSF11O14788 317 aa19.63■□□□□ 0.73
PNKP-201ENST00000322344 ICAM2P13598 275 aa19.63■□□□□ 0.73
PNKP-201ENST00000322344 AKR1C4P17516 323 aa19.63■□□□□ 0.73
PNKP-201ENST00000322344 ARFRP1Q13795 201 aa19.63■□□□□ 0.73
PNKP-201ENST00000322344 TRIM61Q5EBN2 209 aa19.63■□□□□ 0.73
PNKP-201ENST00000322344 FAM27BQ5VT28 67 aa19.63■□□□□ 0.73
PNKP-201ENST00000322344 LRRC18Q8N456 261 aa19.63■□□□□ 0.73
PNKP-201ENST00000322344 OR51T1Q8NGJ9 327 aa19.63■□□□□ 0.73
PNKP-201ENST00000322344 MARCH1Q8TCQ1 289 aa19.63■□□□□ 0.73
PNKP-201ENST00000322344 PPP1R1CQ8WVI7 109 aa19.63■□□□□ 0.73
PNKP-201ENST00000322344 ZNF799Q96GE5 643 aa19.63■□□□□ 0.73
PNKP-201ENST00000322344 SLC25A32Q9H2D1 315 aa19.63■□□□□ 0.73
PNKP-201ENST00000322344 A0A1W2PP11 408 aa19.62■□□□□ 0.73
PNKP-201ENST00000322344 C5orf63A6NC05 138 aa19.62■□□□□ 0.73
PNKP-201ENST00000322344 SPDEFO95238 335 aa19.62■□□□□ 0.73
PNKP-201ENST00000322344 P04436 131 aa19.62■□□□□ 0.73
PNKP-201ENST00000322344 RAC3P60763 192 aa19.62■□□□□ 0.73
PNKP-201ENST00000322344 TMEM17Q86X19 198 aa19.62■□□□□ 0.73
PNKP-201ENST00000322344 OR5H2Q8NGV7 314 aa19.62■□□□□ 0.73
PNKP-201ENST00000322344 ST8SIA2Q92186 375 aa19.62■□□□□ 0.73
PNKP-201ENST00000322344 LIN37Q96GY3 246 aaPredicted RBP19.62■□□□□ 0.73
PNKP-201ENST00000322344 SEC22AQ96IW7 307 aa19.62■□□□□ 0.73
PNKP-201ENST00000322344 FN3KRPQ9HA64 309 aa19.62■□□□□ 0.73
PNKP-201ENST00000322344 PCDHGA1Q9Y5H4 931 aa19.62■□□□□ 0.73
PNKP-201ENST00000322344 BCL2L11O43521 198 aa19.61■□□□□ 0.73
PNKP-201ENST00000322344 RAD51DO75771 328 aa19.61■□□□□ 0.73
PNKP-201ENST00000322344 CHAF1BQ13112 559 aa19.61■□□□□ 0.73
PNKP-201ENST00000322344 RSPO1Q2MKA7 263 aaPredicted RBP19.61■□□□□ 0.73
PNKP-201ENST00000322344 TMEM128Q5BJH2 165 aa19.61■□□□□ 0.73
PNKP-201ENST00000322344 RTL6Q6ICC9 239 aa19.61■□□□□ 0.73
PNKP-201ENST00000322344 ACOT7LQ6ZUV0 252 aa19.61■□□□□ 0.73
PNKP-201ENST00000322344 SLC16A14Q7RTX9 510 aa19.61■□□□□ 0.73
PNKP-201ENST00000322344 TMEM185AQ8NFB2 350 aa19.61■□□□□ 0.73
PNKP-201ENST00000322344 THAP6Q8TBB0 222 aa19.61■□□□□ 0.73
PNKP-201ENST00000322344 CASTOR1Q8WTX7 329 aa19.61■□□□□ 0.73
PNKP-201ENST00000322344 SRXN1Q9BYN0 137 aa19.61■□□□□ 0.73
PNKP-201ENST00000322344 PLEK2Q9NYT0 353 aa19.61■□□□□ 0.73
PNKP-201ENST00000322344 GPR132Q9UNW8 380 aa19.61■□□□□ 0.73
PNKP-201ENST00000322344 KCNMB2Q9Y691 235 aa19.61■□□□□ 0.73
PNKP-201ENST00000322344 DBX1A6NMT0 343 aa19.61■□□□□ 0.73
PNKP-201ENST00000322344 FOXI3A8MTJ6 420 aaPredicted RBP19.61■□□□□ 0.73
PNKP-201ENST00000322344 SMAD9O15198 467 aaKnown RBP19.61■□□□□ 0.73
PNKP-201ENST00000322344 CA11O75493 328 aa19.61■□□□□ 0.73
PNKP-201ENST00000322344 PDGFBP01127 241 aaPredicted RBP19.61■□□□□ 0.73
PNKP-201ENST00000322344 GP1BAP07359 652 aa19.61■□□□□ 0.73
PNKP-201ENST00000322344 B3GALT5-AS1P59052 145 aa19.61■□□□□ 0.73
PNKP-201ENST00000322344 JMJD6Q6NYC1 403 aaPredicted RBP19.61■□□□□ 0.73
PNKP-201ENST00000322344 SLC23A3Q6PIS1 610 aa19.61■□□□□ 0.73
PNKP-201ENST00000322344 OR52H1Q8NGJ2 320 aa19.61■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms