RNA–Protein interactions for RNA: ENST00000322213.8

SMC1A-201, Transcript of structural maintenance of chromosomes 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC1A, Length 9,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-201ENST00000322213 KREMEN2Q8NCW0 462 aa6.39□□□□□ -1.39
SMC1A-201ENST00000322213 DYRK2Q92630 601 aa6.39□□□□□ -1.39
SMC1A-201ENST00000322213 FGGYQ96C11 551 aa6.39□□□□□ -1.39
SMC1A-201ENST00000322213 SLC46A1Q96NT5 459 aa6.39□□□□□ -1.39
SMC1A-201ENST00000322213 PCED1AQ9H1Q7 454 aa6.39□□□□□ -1.39
SMC1A-201ENST00000322213 DUXBA0A1W2PPF3 345 aa6.39□□□□□ -1.39
SMC1A-201ENST00000322213 C7orf77A4D0Y5 90 aa6.39□□□□□ -1.39
SMC1A-201ENST00000322213 ERVFC1-1P60608 527 aa6.39□□□□□ -1.39
SMC1A-201ENST00000322213 ZNF684Q5T5D7 378 aa6.39□□□□□ -1.39
SMC1A-201ENST00000322213 DMRTA1Q5VZB9 504 aa6.39□□□□□ -1.39
SMC1A-201ENST00000322213 ZNF385CQ66K41 422 aaPredicted RBP6.39□□□□□ -1.39
SMC1A-201ENST00000322213 PRSS54Q6PEW0 395 aa6.39□□□□□ -1.39
SMC1A-201ENST00000322213 SYT13Q7L8C5 426 aa6.39□□□□□ -1.39
SMC1A-201ENST00000322213 TRMT61AQ96FX7 289 aaKnown RBP6.39□□□□□ -1.39
SMC1A-201ENST00000322213 ACY3Q96HD9 319 aa6.39□□□□□ -1.39
SMC1A-201ENST00000322213 FOXN4Q96NZ1 517 aa6.39□□□□□ -1.39
SMC1A-201ENST00000322213 PAAF1Q9BRP4 392 aa6.39□□□□□ -1.39
SMC1A-201ENST00000322213 C17orf105B2RV13 164 aa6.39□□□□□ -1.39
SMC1A-201ENST00000322213 ZNF814B7Z6K7 855 aa6.39□□□□□ -1.39
SMC1A-201ENST00000322213 SLC35E3Q7Z769 313 aa6.39□□□□□ -1.39
SMC1A-201ENST00000322213 S100A7AQ86SG5 101 aa6.39□□□□□ -1.39
SMC1A-201ENST00000322213 CATSPERDQ86XM0 798 aa6.39□□□□□ -1.39
SMC1A-201ENST00000322213 GPR137CQ8N3F9 429 aa6.39□□□□□ -1.39
SMC1A-201ENST00000322213 TMEM184BQ9Y519 407 aaPredicted RBP6.39□□□□□ -1.39
SMC1A-201ENST00000322213 TRAPPC2LH3BP13 241 aa6.38□□□□□ -1.39
SMC1A-201ENST00000322213 HOXD9P28356 352 aaPredicted RBP6.38□□□□□ -1.39
SMC1A-201ENST00000322213 MZT1Q08AG7 82 aa6.38□□□□□ -1.39
SMC1A-201ENST00000322213 SKP2Q13309 424 aa6.38□□□□□ -1.39
SMC1A-201ENST00000322213 GUCA2BQ16661 112 aa6.38□□□□□ -1.39
SMC1A-201ENST00000322213 RPEL1Q2QD12 228 aa6.38□□□□□ -1.39
SMC1A-201ENST00000322213 HSD11B1LQ7Z5J1 315 aa6.38□□□□□ -1.39
SMC1A-201ENST00000322213 OR4S1Q8NGB4 309 aa6.38□□□□□ -1.39
SMC1A-201ENST00000322213 LHX4Q969G2 390 aa6.38□□□□□ -1.39
SMC1A-201ENST00000322213 ZFYVE21Q9BQ24 234 aa6.38□□□□□ -1.39
SMC1A-201ENST00000322213 VN1R3Q9BXE9 311 aa6.38□□□□□ -1.39
SMC1A-201ENST00000322213 OTOL1A6NHN0 477 aaPredicted RBP6.38□□□□□ -1.39
SMC1A-201ENST00000322213 HEPACAM2A8MVW5 462 aa6.38□□□□□ -1.39
SMC1A-201ENST00000322213 C9J4A7 227 aa6.38□□□□□ -1.39
SMC1A-201ENST00000322213 WNT11O96014 354 aa6.38□□□□□ -1.39
SMC1A-201ENST00000322213 LCATP04180 440 aa6.38□□□□□ -1.39
SMC1A-201ENST00000322213 PTGER1P34995 402 aa6.38□□□□□ -1.39
SMC1A-201ENST00000322213 PCBP3P57721 371 aaKnown RBP6.38□□□□□ -1.39
SMC1A-201ENST00000322213 BTG2P78543 158 aa6.38□□□□□ -1.39
SMC1A-201ENST00000322213 TMEM241Q24JQ0 296 aa6.38□□□□□ -1.39
SMC1A-201ENST00000322213 DRAM2Q6UX65 266 aa6.38□□□□□ -1.39
SMC1A-201ENST00000322213 CPT1CQ8TCG5 803 aa6.38□□□□□ -1.39
SMC1A-201ENST00000322213 PDFQ9HBH1 243 aa6.38□□□□□ -1.39
SMC1A-201ENST00000322213 R4GMQ9 66 aa6.38□□□□□ -1.39
SMC1A-201ENST00000322213 A0A1B0GWJ7 208 aa6.38□□□□□ -1.39
SMC1A-201ENST00000322213 CDX1P47902 265 aaPredicted RBP6.38□□□□□ -1.39
SMC1A-201ENST00000322213 NKAIN2Q5VXU1 208 aa6.38□□□□□ -1.39
SMC1A-201ENST00000322213 NHLRC2Q8NBF2 726 aa6.38□□□□□ -1.39
SMC1A-201ENST00000322213 FAM122AQ96E09 287 aa6.38□□□□□ -1.39
SMC1A-201ENST00000322213 HHIPQ96QV1 700 aa6.38□□□□□ -1.39
SMC1A-201ENST00000322213 SLC22A12Q96S37 553 aa6.38□□□□□ -1.39
SMC1A-201ENST00000322213 LYRM4Q9HD34 91 aa6.38□□□□□ -1.39
SMC1A-201ENST00000322213 OR14J1Q9UGF5 321 aa6.38□□□□□ -1.39
SMC1A-201ENST00000322213 NXT1Q9UKK6 140 aaKnown RBP6.38□□□□□ -1.39
SMC1A-201ENST00000322213 HS3ST2Q9Y278 367 aa6.38□□□□□ -1.39
SMC1A-201ENST00000322213 TRAV36DV7A0A075B6V5 113 aa6.38□□□□□ -1.39
SMC1A-201ENST00000322213 H3BML4 177 aa6.38□□□□□ -1.39
SMC1A-201ENST00000322213 CTXN2P0C2S0 81 aa6.38□□□□□ -1.39
SMC1A-201ENST00000322213 FKRPQ9H9S5 495 aa6.38□□□□□ -1.39
SMC1A-201ENST00000322213 DNMT3BQ9UBC3 853 aaKnown RBP6.38□□□□□ -1.39
SMC1A-201ENST00000322213 A0A0U1RQS6 177 aa6.38□□□□□ -1.39
SMC1A-201ENST00000322213 FITM1A5D6W6 292 aa6.38□□□□□ -1.39
SMC1A-201ENST00000322213 A6NDN8 102 aa6.38□□□□□ -1.39
SMC1A-201ENST00000322213 GPR75O95800 540 aa6.38□□□□□ -1.39
SMC1A-201ENST00000322213 B3GALT4O96024 378 aa6.38□□□□□ -1.39
SMC1A-201ENST00000322213 LY6G5CQ5SRR4 150 aa6.38□□□□□ -1.39
SMC1A-201ENST00000322213 FAM181AQ8N9Y4 354 aa6.38□□□□□ -1.39
SMC1A-201ENST00000322213 SPHK2Q9NRA0 654 aa6.38□□□□□ -1.39
SMC1A-201ENST00000322213 CA10Q9NS85 328 aa6.38□□□□□ -1.39
SMC1A-201ENST00000322213 TNFSF18Q9UNG2 199 aa6.38□□□□□ -1.39
SMC1A-201ENST00000322213 PAM16Q9Y3D7 125 aa6.38□□□□□ -1.39
SMC1A-201ENST00000322213 PAPPA2Q9BXP8 1791 aa6.38□□□□□ -1.39
SMC1A-201ENST00000322213 UBE2L5PA0A1B0GUS4 154 aa6.38□□□□□ -1.39
SMC1A-201ENST00000322213 SERINC4A6NH21 518 aa6.38□□□□□ -1.39
SMC1A-201ENST00000322213 CRHP06850 196 aa6.38□□□□□ -1.39
SMC1A-201ENST00000322213 LINC00614P0C842 121 aa6.38□□□□□ -1.39
SMC1A-201ENST00000322213 NPPBP16860 134 aa6.38□□□□□ -1.39
SMC1A-201ENST00000322213 COX5AP20674 150 aa6.38□□□□□ -1.39
SMC1A-201ENST00000322213 SRP14P37108 136 aaKnown RBP6.38□□□□□ -1.39
SMC1A-201ENST00000322213 PRDX1Q06830 199 aaKnown RBP6.38□□□□□ -1.39
SMC1A-201ENST00000322213 PRR27Q6MZM9 219 aa6.38□□□□□ -1.39
SMC1A-201ENST00000322213 ZNF595Q8IYB9 648 aa6.38□□□□□ -1.39
SMC1A-201ENST00000322213 TTC9BQ8N6N2 239 aa6.38□□□□□ -1.39
SMC1A-201ENST00000322213 CHRDL1Q9BU40 450 aa6.38□□□□□ -1.39
SMC1A-201ENST00000322213 RBM24Q9BX46 236 aaKnown RBP6.38□□□□□ -1.39
SMC1A-201ENST00000322213 PRDM7Q9NQW5 492 aa6.38□□□□□ -1.39
SMC1A-201ENST00000322213 CACFD1Q9UGQ2 172 aa6.38□□□□□ -1.39
SMC1A-201ENST00000322213 ING1Q9UK53 422 aaPredicted RBP6.38□□□□□ -1.39
SMC1A-201ENST00000322213 KIR2DS1A0A191URI9 304 aa6.38□□□□□ -1.39
SMC1A-201ENST00000322213 TNFRSF10CO14798 259 aa6.38□□□□□ -1.39
SMC1A-201ENST00000322213 NXPH3O95157 252 aa6.38□□□□□ -1.39
SMC1A-201ENST00000322213 C1SP09871 688 aa6.38□□□□□ -1.39
SMC1A-201ENST00000322213 OR5AC1P0C628 307 aa6.38□□□□□ -1.39
SMC1A-201ENST00000322213 KIR2DS4P43632 304 aa6.38□□□□□ -1.39
SMC1A-201ENST00000322213 KIR2DS1Q14954 304 aa6.38□□□□□ -1.39
SMC1A-201ENST00000322213 RAET1LQ5VY80 246 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms