RNA–Protein interactions for RNA: ENST00000318023.11

CAPN3-201, Transcript of calpain 3, humanhuman

TSL 5 BASIC

Gene CAPN3, Length 3,172 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-201ENST00000318023 PRDX1Q06830 199 aaKnown RBP8.36□□□□□ -1.07
CAPN3-201ENST00000318023 CDK5R1Q15078 307 aa8.36□□□□□ -1.07
CAPN3-201ENST00000318023 UBE2V2Q15819 145 aa8.36□□□□□ -1.07
CAPN3-201ENST00000318023 NCR3LG1Q68D85 454 aa8.36□□□□□ -1.07
CAPN3-201ENST00000318023 RPL7L1Q6DKI1 246 aaKnown RBP8.36□□□□□ -1.07
CAPN3-201ENST00000318023 BIVMQ86UB2 503 aa8.36□□□□□ -1.07
CAPN3-201ENST00000318023 ZNF227Q86WZ6 799 aa8.36□□□□□ -1.07
CAPN3-201ENST00000318023 AMER3Q8N944 861 aa8.36□□□□□ -1.07
CAPN3-201ENST00000318023 BEND2Q8NDZ0 799 aa8.36□□□□□ -1.07
CAPN3-201ENST00000318023 OR9A4Q8NGU2 314 aa8.36□□□□□ -1.07
CAPN3-201ENST00000318023 NEK7Q8TDX7 302 aa8.36□□□□□ -1.07
CAPN3-201ENST00000318023 Q8WTZ3 238 aa8.36□□□□□ -1.07
CAPN3-201ENST00000318023 MIB2Q96AX9 1013 aa8.36□□□□□ -1.07
CAPN3-201ENST00000318023 NOL4LQ96MY1 436 aaPredicted RBP8.36□□□□□ -1.07
CAPN3-201ENST00000318023 ZNF385AQ96PM9 386 aaKnown RBP8.36□□□□□ -1.07
CAPN3-201ENST00000318023 DIRC2Q96SL1 478 aa8.36□□□□□ -1.07
CAPN3-201ENST00000318023 SLC12A9Q9BXP2 914 aa8.36□□□□□ -1.07
CAPN3-201ENST00000318023 PARD6GQ9BYG4 376 aaPredicted RBP8.36□□□□□ -1.07
CAPN3-201ENST00000318023 C1orf198Q9H425 327 aa8.36□□□□□ -1.07
CAPN3-201ENST00000318023 ZNF724A8MTY0 619 aa8.35□□□□□ -1.07
CAPN3-201ENST00000318023 C9J4A7 227 aa8.35□□□□□ -1.07
CAPN3-201ENST00000318023 CYB5BO43169 146 aa8.35□□□□□ -1.07
CAPN3-201ENST00000318023 NDUFS4O43181 175 aa8.35□□□□□ -1.07
CAPN3-201ENST00000318023 DNAJB6O75190 326 aa8.35□□□□□ -1.07
CAPN3-201ENST00000318023 ZGLP1P0C6A0 271 aa8.35□□□□□ -1.07
CAPN3-201ENST00000318023 IFNGR2P38484 337 aa8.35□□□□□ -1.07
CAPN3-201ENST00000318023 CCL11P51671 97 aa8.35□□□□□ -1.07
CAPN3-201ENST00000318023 CEBPGP53567 150 aa8.35□□□□□ -1.07
CAPN3-201ENST00000318023 LTBQ06643 244 aa8.35□□□□□ -1.07
CAPN3-201ENST00000318023 PPP1R1AQ13522 171 aa8.35□□□□□ -1.07
CAPN3-201ENST00000318023 BTNL8Q6UX41 500 aa8.35□□□□□ -1.07
CAPN3-201ENST00000318023 CD180Q99467 661 aa8.35□□□□□ -1.07
CAPN3-201ENST00000318023 ADGRL4Q9HBW9 690 aa8.35□□□□□ -1.07
CAPN3-201ENST00000318023 SPTBN1Q01082 2364 aaKnown RBP8.35□□□□□ -1.07
CAPN3-201ENST00000318023 HSPA12AO43301 675 aa8.35□□□□□ -1.07
CAPN3-201ENST00000318023 DXOO77932 396 aaKnown RBP8.35□□□□□ -1.07
CAPN3-201ENST00000318023 PTBP3O95758 552 aaKnown RBP8.35□□□□□ -1.07
CAPN3-201ENST00000318023 C8GP07360 202 aa8.35□□□□□ -1.07
CAPN3-201ENST00000318023 RAB40ALP0C0E4 278 aa8.35□□□□□ -1.07
CAPN3-201ENST00000318023 NPPBP16860 134 aa8.35□□□□□ -1.07
CAPN3-201ENST00000318023 PSMB6P28072 239 aa8.35□□□□□ -1.07
CAPN3-201ENST00000318023 SERPINF1P36955 418 aa8.35□□□□□ -1.07
CAPN3-201ENST00000318023 TMPRSS3P57727 454 aa8.35□□□□□ -1.07
CAPN3-201ENST00000318023 RBX1P62877 108 aa8.35□□□□□ -1.07
CAPN3-201ENST00000318023 SQSTM1Q13501 440 aa8.35□□□□□ -1.07
CAPN3-201ENST00000318023 EIF2B1Q14232 305 aaKnown RBP8.35□□□□□ -1.07
CAPN3-201ENST00000318023 IL11RAQ14626 422 aa8.35□□□□□ -1.07
CAPN3-201ENST00000318023 TOMM34Q15785 309 aaPredicted RBP8.35□□□□□ -1.07
CAPN3-201ENST00000318023 DEFB134Q4QY38 66 aa8.35□□□□□ -1.07
CAPN3-201ENST00000318023 DEGS2Q6QHC5 323 aa8.35□□□□□ -1.07
CAPN3-201ENST00000318023 MBOAT2Q6ZWT7 520 aa8.35□□□□□ -1.07
CAPN3-201ENST00000318023 DTX1Q86Y01 620 aa8.35□□□□□ -1.07
CAPN3-201ENST00000318023 LINC00471Q8N535 108 aa8.35□□□□□ -1.07
CAPN3-201ENST00000318023 RAB40AQ8WXH6 277 aa8.35□□□□□ -1.07
CAPN3-201ENST00000318023 NEURL3Q96EH8 262 aa8.35□□□□□ -1.07
CAPN3-201ENST00000318023 ZFYVE21Q9BQ24 234 aa8.35□□□□□ -1.07
CAPN3-201ENST00000318023 DPH1Q9BZG8 443 aa8.35□□□□□ -1.07
CAPN3-201ENST00000318023 ZMAT3Q9HA38 289 aaKnown RBP8.35□□□□□ -1.07
CAPN3-201ENST00000318023 CUTCQ9NTM9 273 aa8.35□□□□□ -1.07
CAPN3-201ENST00000318023 PLA2G2EQ9NZK7 142 aa8.35□□□□□ -1.07
CAPN3-201ENST00000318023 MRPS33Q9Y291 106 aaKnown RBP8.35□□□□□ -1.07
CAPN3-201ENST00000318023 FBXO7Q9Y3I1 522 aa8.35□□□□□ -1.07
CAPN3-201ENST00000318023 HEATR5BQ9P2D3 2071 aa8.35□□□□□ -1.07
CAPN3-201ENST00000318023 IGHV3-20A0A0C4DH32 117 aa8.34□□□□□ -1.07
CAPN3-201ENST00000318023 H0YIZ8 118 aa8.34□□□□□ -1.07
CAPN3-201ENST00000318023 RPL36A-HNRNPH2H7BZ11 118 aa8.34□□□□□ -1.07
CAPN3-201ENST00000318023 GEMIN2O14893 280 aaKnown RBP8.34□□□□□ -1.07
CAPN3-201ENST00000318023 AIFM1O95831 613 aa8.34□□□□□ -1.07
CAPN3-201ENST00000318023 MAS1P04201 325 aa8.34□□□□□ -1.07
CAPN3-201ENST00000318023 LINC00614P0C842 121 aa8.34□□□□□ -1.07
CAPN3-201ENST00000318023 TRGC1P0CF51 173 aa8.34□□□□□ -1.07
CAPN3-201ENST00000318023 SKP1P63208 163 aa8.34□□□□□ -1.07
CAPN3-201ENST00000318023 ZNF616Q08AN1 781 aa8.34□□□□□ -1.07
CAPN3-201ENST00000318023 PDE7AQ13946 482 aa8.34□□□□□ -1.07
CAPN3-201ENST00000318023 FAM71E1Q6IPT2 247 aa8.34□□□□□ -1.07
CAPN3-201ENST00000318023 C16orf54Q6UWD8 224 aa8.34□□□□□ -1.07
CAPN3-201ENST00000318023 GABRG1Q8N1C3 465 aa8.34□□□□□ -1.07
CAPN3-201ENST00000318023 ZG16BQ96DA0 208 aa8.34□□□□□ -1.07
CAPN3-201ENST00000318023 ZMYND19Q96E35 227 aaPredicted RBP8.34□□□□□ -1.07
CAPN3-201ENST00000318023 ARSGQ96EG1 525 aa8.34□□□□□ -1.07
CAPN3-201ENST00000318023 SAT2Q96F10 170 aaPredicted RBP8.34□□□□□ -1.07
CAPN3-201ENST00000318023 HECTD1Q9ULT8 2610 aa8.34□□□□□ -1.07
CAPN3-201ENST00000318023 SCAF4O95104 1147 aaKnown RBP8.34□□□□□ -1.07
CAPN3-201ENST00000318023 CNOT4O95628 575 aaKnown RBP8.34□□□□□ -1.07
CAPN3-201ENST00000318023 DIRAS3O95661 229 aa8.34□□□□□ -1.07
CAPN3-201ENST00000318023 GPANK1O95872 356 aa8.34□□□□□ -1.07
CAPN3-201ENST00000318023 MPC1LP0DKB6 136 aa8.34□□□□□ -1.07
CAPN3-201ENST00000318023 GRPRP30550 384 aa8.34□□□□□ -1.07
CAPN3-201ENST00000318023 BCL6P41182 706 aa8.34□□□□□ -1.07
CAPN3-201ENST00000318023 RPL29P47914 159 aaKnown RBP8.34□□□□□ -1.07
CAPN3-201ENST00000318023 RGS8P57771 180 aaPredicted RBP8.34□□□□□ -1.07
CAPN3-201ENST00000318023 BTG2P78543 158 aa8.34□□□□□ -1.07
CAPN3-201ENST00000318023 NAAAQ02083 359 aa8.34□□□□□ -1.07
CAPN3-201ENST00000318023 RHEBQ15382 184 aa8.34□□□□□ -1.07
CAPN3-201ENST00000318023 BATFQ16520 125 aa8.34□□□□□ -1.07
CAPN3-201ENST00000318023 NKAIN1Q4KMZ8 207 aa8.34□□□□□ -1.07
CAPN3-201ENST00000318023 MIDNQ504T8 468 aa8.34□□□□□ -1.07
CAPN3-201ENST00000318023 GRHL2Q6ISB3 625 aa8.34□□□□□ -1.07
CAPN3-201ENST00000318023 CD163Q86VB7 1156 aa8.34□□□□□ -1.07
CAPN3-201ENST00000318023 C22orf15Q8WYQ4 148 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 104.4 ms