RNA–Protein interactions for RNA: ENST00000317677.9

CPNE1-201, Transcript of copine 1, humanhuman

TSL 1 (best) BASIC

Gene CPNE1, Length 1,961 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-201ENST00000317677 ACACAQ13085 2346 aa11.55□□□□□ -0.56
CPNE1-201ENST00000317677 A0A1W2PNV4 684 aa11.55□□□□□ -0.56
CPNE1-201ENST00000317677 RNF222A6NCQ9 220 aa11.55□□□□□ -0.56
CPNE1-201ENST00000317677 PYCARD-AS1I3L0S3 204 aa11.55□□□□□ -0.56
CPNE1-201ENST00000317677 GOSR2O14653 212 aa11.55□□□□□ -0.56
CPNE1-201ENST00000317677 SLC16A7O60669 478 aa11.55□□□□□ -0.56
CPNE1-201ENST00000317677 WNT11O96014 354 aa11.55□□□□□ -0.56
CPNE1-201ENST00000317677 ALOX5APP20292 161 aa11.55□□□□□ -0.56
CPNE1-201ENST00000317677 NFYBP25208 207 aa11.55□□□□□ -0.56
CPNE1-201ENST00000317677 DPP4P27487 766 aa11.55□□□□□ -0.56
CPNE1-201ENST00000317677 ADH6P28332 368 aa11.55□□□□□ -0.56
CPNE1-201ENST00000317677 SFTPDP35247 375 aa11.55□□□□□ -0.56
CPNE1-201ENST00000317677 LUMP51884 338 aaPredicted RBP11.55□□□□□ -0.56
CPNE1-201ENST00000317677 HSF1Q00613 529 aa11.55□□□□□ -0.56
CPNE1-201ENST00000317677 POU3F1Q03052 451 aaPredicted RBP11.55□□□□□ -0.56
CPNE1-201ENST00000317677 TMEM164Q5U3C3 297 aa11.55□□□□□ -0.56
CPNE1-201ENST00000317677 LRRC69Q6ZNQ3 347 aa11.55□□□□□ -0.56
CPNE1-201ENST00000317677 SLC35D2Q76EJ3 337 aa11.55□□□□□ -0.56
CPNE1-201ENST00000317677 LINGO2Q7L985 606 aa11.55□□□□□ -0.56
CPNE1-201ENST00000317677 DND1Q8IYX4 353 aaKnown RBP11.55□□□□□ -0.56
CPNE1-201ENST00000317677 BEST3Q8N1M1 668 aa11.55□□□□□ -0.56
CPNE1-201ENST00000317677 AKR7LQ8NHP1 331 aa11.55□□□□□ -0.56
CPNE1-201ENST00000317677 RGP1Q92546 391 aaPredicted RBP11.55□□□□□ -0.56
CPNE1-201ENST00000317677 ZBTB8AQ96BR9 441 aa11.55□□□□□ -0.56
CPNE1-201ENST00000317677 OR5B2Q96R09 309 aa11.55□□□□□ -0.56
CPNE1-201ENST00000317677 PDCD1LG2Q9BQ51 273 aa11.55□□□□□ -0.56
CPNE1-201ENST00000317677 PTGES2Q9H7Z7 377 aa11.55□□□□□ -0.56
CPNE1-201ENST00000317677 MRPL15Q9P015 296 aaKnown RBP11.55□□□□□ -0.56
CPNE1-201ENST00000317677 KCNG2Q9UJ96 466 aa11.55□□□□□ -0.56
CPNE1-201ENST00000317677 B3GALT5Q9Y2C3 310 aa11.55□□□□□ -0.56
CPNE1-201ENST00000317677 ANKRD11Q6UB99 2663 aaPredicted RBP11.55□□□□□ -0.56
CPNE1-201ENST00000317677 A0A1W2PPE3 182 aa11.54□□□□□ -0.56
CPNE1-201ENST00000317677 NPIPB13A6NJU9 1138 aa11.54□□□□□ -0.56
CPNE1-201ENST00000317677 C21orf140B9A014 251 aa11.54□□□□□ -0.56
CPNE1-201ENST00000317677 NPIPB4C9JG80 1138 aa11.54□□□□□ -0.56
CPNE1-201ENST00000317677 MPZL1O95297 269 aa11.54□□□□□ -0.56
CPNE1-201ENST00000317677 NDUFB7P17568 137 aa11.54□□□□□ -0.56
CPNE1-201ENST00000317677 MEP1BQ16820 701 aa11.54□□□□□ -0.56
CPNE1-201ENST00000317677 TMEM176BQ3YBM2 270 aaPredicted RBP11.54□□□□□ -0.56
CPNE1-201ENST00000317677 ACSM3Q53FZ2 586 aa11.54□□□□□ -0.56
CPNE1-201ENST00000317677 ATPAF1Q5TC12 328 aaPredicted RBP11.54□□□□□ -0.56
CPNE1-201ENST00000317677 GLT8D1Q68CQ7 371 aa11.54□□□□□ -0.56
CPNE1-201ENST00000317677 RAB12Q6IQ22 244 aa11.54□□□□□ -0.56
CPNE1-201ENST00000317677 OR52B4Q8NGK2 314 aa11.54□□□□□ -0.56
CPNE1-201ENST00000317677 ADAD1Q96M93 576 aaKnown RBP11.54□□□□□ -0.56
CPNE1-201ENST00000317677 INTS14Q96SY0 518 aa11.54□□□□□ -0.56
CPNE1-201ENST00000317677 SSX3Q99909 188 aa11.54□□□□□ -0.56
CPNE1-201ENST00000317677 EMC6Q9BV81 110 aa11.54□□□□□ -0.56
CPNE1-201ENST00000317677 GPR87Q9BY21 358 aa11.54□□□□□ -0.56
CPNE1-201ENST00000317677 DEPPQ9NTK1 212 aa11.54□□□□□ -0.56
CPNE1-201ENST00000317677 ASF1BQ9NVP2 202 aa11.54□□□□□ -0.56
CPNE1-201ENST00000317677 KLHL13Q9P2N7 655 aa11.54□□□□□ -0.56
CPNE1-201ENST00000317677 MED13Q9UHV7 2174 aa11.54□□□□□ -0.56
CPNE1-201ENST00000317677 A0A087WZY1 265 aa11.54□□□□□ -0.56
CPNE1-201ENST00000317677 A0A1B0GTH9 108 aa11.54□□□□□ -0.56
CPNE1-201ENST00000317677 PINLYPA6NC86 204 aa11.54□□□□□ -0.56
CPNE1-201ENST00000317677 LRRC3CA6NJW4 275 aa11.54□□□□□ -0.56
CPNE1-201ENST00000317677 ACOT7O00154 380 aa11.54□□□□□ -0.56
CPNE1-201ENST00000317677 LY86O95711 162 aa11.54□□□□□ -0.56
CPNE1-201ENST00000317677 F10P00742 488 aa11.54□□□□□ -0.56
CPNE1-201ENST00000317677 EDNRAP25101 427 aa11.54□□□□□ -0.56
CPNE1-201ENST00000317677 FAUP35544 74 aaKnown RBP11.54□□□□□ -0.56
CPNE1-201ENST00000317677 B3GALT5-AS1P59052 145 aa11.54□□□□□ -0.56
CPNE1-201ENST00000317677 ZNF239Q16600 458 aaKnown RBP11.54□□□□□ -0.56
CPNE1-201ENST00000317677 MTFR2Q6P444 385 aa11.54□□□□□ -0.56
CPNE1-201ENST00000317677 RPL22L1Q6P5R6 122 aaKnown RBP11.54□□□□□ -0.56
CPNE1-201ENST00000317677 ACOT7LQ6ZUV0 252 aa11.54□□□□□ -0.56
CPNE1-201ENST00000317677 TMEM200AQ86VY9 491 aa11.54□□□□□ -0.56
CPNE1-201ENST00000317677 MUC20Q8N307 709 aaPredicted RBP11.54□□□□□ -0.56
CPNE1-201ENST00000317677 STOML3Q8TAV4 291 aa11.54□□□□□ -0.56
CPNE1-201ENST00000317677 WNT2BQ93097 391 aa11.54□□□□□ -0.56
CPNE1-201ENST00000317677 THOC3Q96J01 351 aaKnown RBP11.54□□□□□ -0.56
CPNE1-201ENST00000317677 JSRP1Q96MG2 331 aaPredicted RBP11.54□□□□□ -0.56
CPNE1-201ENST00000317677 MRI1Q9BV20 369 aa11.54□□□□□ -0.56
CPNE1-201ENST00000317677 C1orf198Q9H425 327 aa11.54□□□□□ -0.56
CPNE1-201ENST00000317677 SEC61A2Q9H9S3 476 aa11.54□□□□□ -0.56
CPNE1-201ENST00000317677 COA3Q9Y2R0 106 aaPredicted RBP11.54□□□□□ -0.56
CPNE1-201ENST00000317677 NPIPA5E9PKD4 350 aa11.53□□□□□ -0.56
CPNE1-201ENST00000317677 TRAF3IP2O43734 574 aaPredicted RBP11.53□□□□□ -0.56
CPNE1-201ENST00000317677 ARL6IP5O75915 188 aa11.53□□□□□ -0.56
CPNE1-201ENST00000317677 CD1AP06126 327 aa11.53□□□□□ -0.56
CPNE1-201ENST00000317677 MELTFP08582 738 aa11.53□□□□□ -0.56
CPNE1-201ENST00000317677 CEACAM6P40199 344 aa11.53□□□□□ -0.56
CPNE1-201ENST00000317677 MAGEB1P43366 347 aa11.53□□□□□ -0.56
CPNE1-201ENST00000317677 PTH2RP49190 550 aa11.53□□□□□ -0.56
CPNE1-201ENST00000317677 DSCR4P56555 118 aaPredicted RBP11.53□□□□□ -0.56
CPNE1-201ENST00000317677 OC90Q02509 493 aaPredicted RBP11.53□□□□□ -0.56
CPNE1-201ENST00000317677 PJVKQ0ZLH3 352 aa11.53□□□□□ -0.56
CPNE1-201ENST00000317677 TOMM20Q15388 145 aa11.53□□□□□ -0.56
CPNE1-201ENST00000317677 LIPNQ5VXI9 398 aa11.53□□□□□ -0.56
CPNE1-201ENST00000317677 ESPNLQ6ZVH7 1005 aa11.53□□□□□ -0.56
CPNE1-201ENST00000317677 ZSCAN2Q7Z7L9 614 aaPredicted RBP11.53□□□□□ -0.56
CPNE1-201ENST00000317677 C1QL4Q86Z23 238 aa11.53□□□□□ -0.56
CPNE1-201ENST00000317677 ADPRHL1Q8NDY3 354 aa11.53□□□□□ -0.56
CPNE1-201ENST00000317677 OR6N1Q8NGY5 312 aa11.53□□□□□ -0.56
CPNE1-201ENST00000317677 OTOSQ8NHW6 89 aa11.53□□□□□ -0.56
CPNE1-201ENST00000317677 SLC25A43Q8WUT9 341 aaPredicted RBP11.53□□□□□ -0.56
CPNE1-201ENST00000317677 RAB3CQ96E17 227 aa11.53□□□□□ -0.56
CPNE1-201ENST00000317677 SGCZQ96LD1 299 aa11.53□□□□□ -0.56
CPNE1-201ENST00000317677 NRIP2Q9BQI9 281 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms