RNA–Protein interactions for RNA: ENST00000315285.7

SPAST-201, Transcript of spastin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SPAST, Length 5,117 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-201ENST00000315285 UFSP2Q9NUQ7 469 aa12.34□□□□□ -0.43
SPAST-201ENST00000315285 YBX2Q9Y2T7 364 aaKnown RBP12.34□□□□□ -0.43
SPAST-201ENST00000315285 HSBP1L1C9JCN9 74 aa12.34□□□□□ -0.43
SPAST-201ENST00000315285 SH2D1BO14796 132 aa12.34□□□□□ -0.43
SPAST-201ENST00000315285 RER1O15258 196 aa12.34□□□□□ -0.43
SPAST-201ENST00000315285 SELEP16581 610 aa12.34□□□□□ -0.43
SPAST-201ENST00000315285 RFC3P40938 356 aa12.34□□□□□ -0.43
SPAST-201ENST00000315285 DEFA6Q01524 100 aa12.34□□□□□ -0.43
SPAST-201ENST00000315285 SPANXN5Q5MJ07 72 aa12.34□□□□□ -0.43
SPAST-201ENST00000315285 RPUSD3Q6P087 351 aaKnown RBP12.34□□□□□ -0.43
SPAST-201ENST00000315285 OR2W3Q7Z3T1 314 aa12.34□□□□□ -0.43
SPAST-201ENST00000315285 LSRQ86X29 649 aaPredicted RBP12.34□□□□□ -0.43
SPAST-201ENST00000315285 SLC35G3Q8N808 338 aa12.34□□□□□ -0.43
SPAST-201ENST00000315285 VSTM2LQ96N03 204 aa12.34□□□□□ -0.43
SPAST-201ENST00000315285 COL11A1P12107 1806 aaPredicted RBP12.34□□□□□ -0.43
SPAST-201ENST00000315285 K7EQS6 105 aa12.34□□□□□ -0.43
SPAST-201ENST00000315285 POU2F2P09086 479 aa12.34□□□□□ -0.43
SPAST-201ENST00000315285 OR8U8P0C7N1 319 aa12.34□□□□□ -0.43
SPAST-201ENST00000315285 CATSPERDQ86XM0 798 aa12.34□□□□□ -0.43
SPAST-201ENST00000315285 GPA33Q99795 319 aa12.34□□□□□ -0.43
SPAST-201ENST00000315285 ANKRD20A5PA0PJZ0 165 aa12.34□□□□□ -0.43
SPAST-201ENST00000315285 TRIM77I1YAP6 450 aa12.34□□□□□ -0.43
SPAST-201ENST00000315285 MOSPD3O75425 235 aa12.34□□□□□ -0.43
SPAST-201ENST00000315285 OR2C1O95371 312 aa12.34□□□□□ -0.43
SPAST-201ENST00000315285 RPS2P15880 293 aaKnown RBP12.34□□□□□ -0.43
SPAST-201ENST00000315285 CD96P40200 585 aa12.34□□□□□ -0.43
SPAST-201ENST00000315285 CSRP3P50461 194 aa12.34□□□□□ -0.43
SPAST-201ENST00000315285 RBPJQ06330 500 aa12.34□□□□□ -0.43
SPAST-201ENST00000315285 SBF2Q86WG5 1849 aa12.34□□□□□ -0.43
SPAST-201ENST00000315285 AQP8O94778 261 aa12.33□□□□□ -0.43
SPAST-201ENST00000315285 THBS3P49746 956 aa12.33□□□□□ -0.43
SPAST-201ENST00000315285 FUT6P51993 359 aa12.33□□□□□ -0.43
SPAST-201ENST00000315285 HLXQ14774 488 aaPredicted RBP12.33□□□□□ -0.43
SPAST-201ENST00000315285 LSMEM1Q8N8F7 131 aa12.33□□□□□ -0.43
SPAST-201ENST00000315285 HPSE2Q8WWQ2 592 aa12.33□□□□□ -0.43
SPAST-201ENST00000315285 C10orf90Q96M02 699 aa12.33□□□□□ -0.43
SPAST-201ENST00000315285 IP6K3Q96PC2 410 aa12.33□□□□□ -0.43
SPAST-201ENST00000315285 FOXB1Q99853 325 aa12.33□□□□□ -0.43
SPAST-201ENST00000315285 ZNF831Q5JPB2 1677 aa12.33□□□□□ -0.44
SPAST-201ENST00000315285 PPIAP62937 165 aaKnown RBP12.33□□□□□ -0.44
SPAST-201ENST00000315285 ZNF626Q68DY1 528 aa12.33□□□□□ -0.44
SPAST-201ENST00000315285 PWWP2BQ6NUJ5 590 aa12.33□□□□□ -0.44
SPAST-201ENST00000315285 TMEM88Q6PEY1 159 aa12.33□□□□□ -0.44
SPAST-201ENST00000315285 ZFP62Q8NB50 900 aaPredicted RBP12.33□□□□□ -0.44
SPAST-201ENST00000315285 SPSB1Q96BD6 273 aa12.33□□□□□ -0.44
SPAST-201ENST00000315285 MAGT1Q9H0U3 335 aa12.33□□□□□ -0.44
SPAST-201ENST00000315285 GNG13Q9P2W3 67 aa12.33□□□□□ -0.44
SPAST-201ENST00000315285 HIST1H1DP16402 221 aaKnown RBP12.33□□□□□ -0.44
SPAST-201ENST00000315285 FPR2P25090 351 aa12.33□□□□□ -0.44
SPAST-201ENST00000315285 INSM1Q01101 510 aaPredicted RBP12.33□□□□□ -0.44
SPAST-201ENST00000315285 IFITM3Q01628 133 aa12.33□□□□□ -0.44
SPAST-201ENST00000315285 ZNF92Q03936 586 aa12.33□□□□□ -0.44
SPAST-201ENST00000315285 PPP1R1AQ13522 171 aa12.33□□□□□ -0.44
SPAST-201ENST00000315285 KISS1Q15726 138 aa12.33□□□□□ -0.44
SPAST-201ENST00000315285 CD226Q15762 336 aa12.33□□□□□ -0.44
SPAST-201ENST00000315285 TMEM41BQ5BJD5 291 aa12.33□□□□□ -0.44
SPAST-201ENST00000315285 PRAMEF5Q5TYX0 476 aa12.33□□□□□ -0.44
SPAST-201ENST00000315285 PRAMEF6Q5VXH4 476 aa12.33□□□□□ -0.44
SPAST-201ENST00000315285 LCN15Q6UWW0 184 aa12.33□□□□□ -0.44
SPAST-201ENST00000315285 ZNF808Q8N4W9 903 aaPredicted RBP12.33□□□□□ -0.44
SPAST-201ENST00000315285 OR1F12Q8NHA8 337 aa12.33□□□□□ -0.44
SPAST-201ENST00000315285 ARHGAP5-AS1Q96IT6 56 aa12.33□□□□□ -0.44
SPAST-201ENST00000315285 GAB2Q9UQC2 676 aa12.33□□□□□ -0.44
SPAST-201ENST00000315285 PLPP3O14495 311 aa12.33□□□□□ -0.44
SPAST-201ENST00000315285 CYB5BO43169 146 aa12.33□□□□□ -0.44
SPAST-201ENST00000315285 SCGB1D1O95968 90 aa12.33□□□□□ -0.44
SPAST-201ENST00000315285 ZNF79Q15937 498 aa12.33□□□□□ -0.44
SPAST-201ENST00000315285 HLA-BQ31612 363 aa12.33□□□□□ -0.44
SPAST-201ENST00000315285 C16orf47Q6ZP98 133 aaPredicted RBP12.33□□□□□ -0.44
SPAST-201ENST00000315285 ZAR1Q86SH2 424 aa12.33□□□□□ -0.44
SPAST-201ENST00000315285 C1orf87Q8N0U7 546 aa12.33□□□□□ -0.44
SPAST-201ENST00000315285 FBXL14Q8N1E6 418 aa12.33□□□□□ -0.44
SPAST-201ENST00000315285 ZNF485Q8NCK3 441 aa12.33□□□□□ -0.44
SPAST-201ENST00000315285 NPEPL1Q8NDH3 523 aa12.33□□□□□ -0.44
SPAST-201ENST00000315285 ANGPTL6Q8NI99 470 aa12.33□□□□□ -0.44
SPAST-201ENST00000315285 PATZ1Q9HBE1 687 aaKnown RBP12.33□□□□□ -0.44
SPAST-201ENST00000315285 BTBD17A6NE02 478 aa12.32□□□□□ -0.44
SPAST-201ENST00000315285 PLA2G10O15496 165 aa12.32□□□□□ -0.44
SPAST-201ENST00000315285 ENSAO43768 121 aaKnown RBP12.32□□□□□ -0.44
SPAST-201ENST00000315285 EML2O95834 649 aa12.32□□□□□ -0.44
SPAST-201ENST00000315285 ACKR3P25106 362 aa12.32□□□□□ -0.44
SPAST-201ENST00000315285 FAM109BQ6ICB4 259 aaPredicted RBP12.32□□□□□ -0.44
SPAST-201ENST00000315285 TMEM123Q8N131 208 aa12.32□□□□□ -0.44
SPAST-201ENST00000315285 OR4D9Q8NGE8 314 aa12.32□□□□□ -0.44
SPAST-201ENST00000315285 RIMS4Q9H426 269 aaPredicted RBP12.32□□□□□ -0.44
SPAST-201ENST00000315285 FN3KRPQ9HA64 309 aa12.32□□□□□ -0.44
SPAST-201ENST00000315285 ZNF275Q9NSD4 429 aaPredicted RBP12.32□□□□□ -0.44
SPAST-201ENST00000315285 NRXN2Q9P2S2 1712 aa12.32□□□□□ -0.44
SPAST-201ENST00000315285 TAF1LQ8IZX4 1826 aa12.32□□□□□ -0.44
SPAST-201ENST00000315285 CYR61O00622 381 aa12.32□□□□□ -0.44
SPAST-201ENST00000315285 FUT7Q11130 342 aa12.32□□□□□ -0.44
SPAST-201ENST00000315285 OR2B11Q5JQS5 317 aa12.32□□□□□ -0.44
SPAST-201ENST00000315285 FAM185AQ8N0U4 392 aa12.32□□□□□ -0.44
SPAST-201ENST00000315285 OR5AP2Q8NGF4 316 aa12.32□□□□□ -0.44
SPAST-201ENST00000315285 OIT3Q8WWZ8 545 aa12.32□□□□□ -0.44
SPAST-201ENST00000315285 RAB27BO00194 218 aa12.32□□□□□ -0.44
SPAST-201ENST00000315285 ZNF239Q16600 458 aaKnown RBP12.32□□□□□ -0.44
SPAST-201ENST00000315285 NHLRC1Q6VVB1 395 aa12.32□□□□□ -0.44
SPAST-201ENST00000315285 ZC3HAV1LQ96H79 300 aaKnown RBP12.32□□□□□ -0.44
SPAST-201ENST00000315285 ZNF468Q5VIY5 522 aaPredicted RBP12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms