RNA–Protein interactions for RNA: ENST00000314759.5

SKA3-202, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SKA3, Length 2,919 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-202ENST00000314759 FAM76BQ5HYJ3 339 aa11.9□□□□□ -0.5
SKA3-202ENST00000314759 C9orf50Q5SZB4 431 aa11.9□□□□□ -0.5
SKA3-202ENST00000314759 H1FNTQ75WM6 255 aaPredicted RBP11.9□□□□□ -0.5
SKA3-202ENST00000314759 SAT2Q96F10 170 aaPredicted RBP11.9□□□□□ -0.5
SKA3-202ENST00000314759 IP6K3Q96PC2 410 aa11.9□□□□□ -0.5
SKA3-202ENST00000314759 EMC6Q9BV81 110 aa11.9□□□□□ -0.5
SKA3-202ENST00000314759 PARP12Q9H0J9 701 aaKnown RBP11.9□□□□□ -0.5
SKA3-202ENST00000314759 hCG_1809904A0A1W2PP81 198 aa11.9□□□□□ -0.51
SKA3-202ENST00000314759 A0A1W2PR64 198 aa11.9□□□□□ -0.51
SKA3-202ENST00000314759 A0A1W2PRV1 198 aa11.9□□□□□ -0.51
SKA3-202ENST00000314759 ZNF354AO60765 605 aaPredicted RBP11.9□□□□□ -0.51
SKA3-202ENST00000314759 CSTBP04080 98 aaKnown RBP11.9□□□□□ -0.51
SKA3-202ENST00000314759 GSTP1P09211 210 aaKnown RBP11.9□□□□□ -0.51
SKA3-202ENST00000314759 OR8U8P0C7N1 319 aa11.9□□□□□ -0.51
SKA3-202ENST00000314759 HIST1H1DP16402 221 aaKnown RBP11.9□□□□□ -0.51
SKA3-202ENST00000314759 OR3A4PP47883 348 aa11.9□□□□□ -0.51
SKA3-202ENST00000314759 FASLGP48023 281 aa11.9□□□□□ -0.51
SKA3-202ENST00000314759 HSF1Q00613 529 aa11.9□□□□□ -0.51
SKA3-202ENST00000314759 C20orf24Q9BUV8 137 aa11.9□□□□□ -0.51
SKA3-202ENST00000314759 SLC26A1Q9H2B4 701 aa11.9□□□□□ -0.51
SKA3-202ENST00000314759 MRPS28Q9Y2Q9 187 aaKnown RBP11.9□□□□□ -0.51
SKA3-202ENST00000314759 PMS2P1A4D2B8 440 aa11.89□□□□□ -0.51
SKA3-202ENST00000314759 OR8U9P0C7N5 309 aa11.89□□□□□ -0.51
SKA3-202ENST00000314759 S100PP25815 95 aa11.89□□□□□ -0.51
SKA3-202ENST00000314759 KRBOX4Q5JUW0 171 aa11.89□□□□□ -0.51
SKA3-202ENST00000314759 PEG10Q86TG7 708 aaKnown RBP11.89□□□□□ -0.51
SKA3-202ENST00000314759 OR5AS1Q8N127 324 aa11.89□□□□□ -0.51
SKA3-202ENST00000314759 OR8U1Q8NH10 309 aa11.89□□□□□ -0.51
SKA3-202ENST00000314759 MRPL38Q96DV4 380 aaKnown RBP11.89□□□□□ -0.51
SKA3-202ENST00000314759 KIRREL1Q96J84 757 aa11.89□□□□□ -0.51
SKA3-202ENST00000314759 METTL8Q9H825 291 aaKnown RBP11.89□□□□□ -0.51
SKA3-202ENST00000314759 WIF1Q9Y5W5 379 aa11.89□□□□□ -0.51
SKA3-202ENST00000314759 PIAS3Q9Y6X2 628 aa11.89□□□□□ -0.51
SKA3-202ENST00000314759 LAMA1P25391 3075 aa11.89□□□□□ -0.51
SKA3-202ENST00000314759 A0A1W2PPH5 198 aa11.89□□□□□ -0.51
SKA3-202ENST00000314759 H3BMH7 237 aa11.89□□□□□ -0.51
SKA3-202ENST00000314759 CDC14BO60729 498 aa11.89□□□□□ -0.51
SKA3-202ENST00000314759 FBXO24O75426 580 aa11.89□□□□□ -0.51
SKA3-202ENST00000314759 SNRNP70P08621 437 aaKnown RBP11.89□□□□□ -0.51
SKA3-202ENST00000314759 ZNF14P17017 642 aaPredicted RBP11.89□□□□□ -0.51
SKA3-202ENST00000314759 BLKP51451 505 aa11.89□□□□□ -0.51
SKA3-202ENST00000314759 IL15RAQ13261 267 aa11.89□□□□□ -0.51
SKA3-202ENST00000314759 AADACL3Q5VUY0 350 aa11.89□□□□□ -0.51
SKA3-202ENST00000314759 KIAA0895LQ68EN5 471 aa11.89□□□□□ -0.51
SKA3-202ENST00000314759 ZNF561Q8N587 486 aa11.89□□□□□ -0.51
SKA3-202ENST00000314759 OR10H5Q8NGA6 315 aa11.89□□□□□ -0.51
SKA3-202ENST00000314759 DAZLQ92904 295 aaKnown RBP11.89□□□□□ -0.51
SKA3-202ENST00000314759 ARHGAP5-AS1Q96IT6 56 aa11.89□□□□□ -0.51
SKA3-202ENST00000314759 DUSP15Q9H1R2 295 aaPredicted RBP11.89□□□□□ -0.51
SKA3-202ENST00000314759 SLC2A4RGQ9NR83 387 aa11.89□□□□□ -0.51
SKA3-202ENST00000314759 GSKIPQ9P0R6 139 aa11.89□□□□□ -0.51
SKA3-202ENST00000314759 METTL1Q9UBP6 276 aaKnown RBP11.89□□□□□ -0.51
SKA3-202ENST00000314759 CYP8B1Q9UNU6 501 aa11.89□□□□□ -0.51
SKA3-202ENST00000314759 SRPK3Q9UPE1 567 aa11.89□□□□□ -0.51
SKA3-202ENST00000314759 YKT6O15498 198 aa11.88□□□□□ -0.51
SKA3-202ENST00000314759 ZNF20P17024 532 aa11.88□□□□□ -0.51
SKA3-202ENST00000314759 DRD1P21728 446 aa11.88□□□□□ -0.51
SKA3-202ENST00000314759 ANOS1P23352 680 aa11.88□□□□□ -0.51
SKA3-202ENST00000314759 GLRA1P23415 457 aa11.88□□□□□ -0.51
SKA3-202ENST00000314759 FPR2P25090 351 aa11.88□□□□□ -0.51
SKA3-202ENST00000314759 ACKR3P25106 362 aa11.88□□□□□ -0.51
SKA3-202ENST00000314759 TLE3Q04726 772 aa11.88□□□□□ -0.51
SKA3-202ENST00000314759 BTNL8Q6UX41 500 aa11.88□□□□□ -0.51
SKA3-202ENST00000314759 C16orf47Q6ZP98 133 aaPredicted RBP11.88□□□□□ -0.51
SKA3-202ENST00000314759 PPP1R3BQ86XI6 285 aa11.88□□□□□ -0.51
SKA3-202ENST00000314759 ZNF441Q8N8Z8 693 aa11.88□□□□□ -0.51
SKA3-202ENST00000314759 POC1AQ8NBT0 407 aa11.88□□□□□ -0.51
SKA3-202ENST00000314759 OR1N1Q8NGS0 311 aa11.88□□□□□ -0.51
SKA3-202ENST00000314759 OR13G1Q8NGZ3 307 aa11.88□□□□□ -0.51
SKA3-202ENST00000314759 C2orf50Q96LR7 162 aa11.88□□□□□ -0.51
SKA3-202ENST00000314759 COPS7AQ9UBW8 275 aa11.88□□□□□ -0.51
SKA3-202ENST00000314759 TLCD2A6NGC4 264 aa11.88□□□□□ -0.51
SKA3-202ENST00000314759 HTR3BO95264 441 aa11.88□□□□□ -0.51
SKA3-202ENST00000314759 IGHV2-5P01817 119 aa11.88□□□□□ -0.51
SKA3-202ENST00000314759 RPS2P15880 293 aaKnown RBP11.88□□□□□ -0.51
SKA3-202ENST00000314759 OR2B8PP59922 312 aa11.88□□□□□ -0.51
SKA3-202ENST00000314759 ACTBL2Q562R1 376 aa11.88□□□□□ -0.51
SKA3-202ENST00000314759 LHFPL1Q86WI0 220 aa11.88□□□□□ -0.51
SKA3-202ENST00000314759 FOXRED2Q8IWF2 684 aa11.88□□□□□ -0.51
SKA3-202ENST00000314759 OR5H2Q8NGV7 314 aa11.88□□□□□ -0.51
SKA3-202ENST00000314759 MFSD8Q8NHS3 518 aa11.88□□□□□ -0.51
SKA3-202ENST00000314759 KCNG3Q8TAE7 436 aa11.88□□□□□ -0.51
SKA3-202ENST00000314759 KLHDC7BQ96G42 594 aa11.88□□□□□ -0.51
SKA3-202ENST00000314759 OCSTAMPQ9BR26 566 aa11.88□□□□□ -0.51
SKA3-202ENST00000314759 TAF9BQ9HBM6 251 aa11.88□□□□□ -0.51
SKA3-202ENST00000314759 ASH2LQ9UBL3 628 aa11.88□□□□□ -0.51
SKA3-202ENST00000314759 TIMM10BQ9Y5J6 103 aa11.88□□□□□ -0.51
SKA3-202ENST00000314759 EPOPA6NHQ4 379 aa11.87□□□□□ -0.51
SKA3-202ENST00000314759 SDCBPO00560 298 aaPredicted RBP11.87□□□□□ -0.51
SKA3-202ENST00000314759 MFNGO00587 321 aa11.87□□□□□ -0.51
SKA3-202ENST00000314759 SLC2A1P11166 492 aa11.87□□□□□ -0.51
SKA3-202ENST00000314759 PAX6P26367 422 aa11.87□□□□□ -0.51
SKA3-202ENST00000314759 BIDP55957 195 aa11.87□□□□□ -0.51
SKA3-202ENST00000314759 ZC3HAV1Q7Z2W4 902 aaKnown RBP11.87□□□□□ -0.51
SKA3-202ENST00000314759 NUDT22Q9BRQ3 303 aa11.87□□□□□ -0.51
SKA3-202ENST00000314759 ST6GALNAC5Q9BVH7 336 aa11.87□□□□□ -0.51
SKA3-202ENST00000314759 PAPOLGQ9BWT3 736 aaKnown RBP11.87□□□□□ -0.51
SKA3-202ENST00000314759 TMEM59Q9BXS4 323 aa11.87□□□□□ -0.51
SKA3-202ENST00000314759 DNAJB11Q9UBS4 358 aa11.87□□□□□ -0.51
SKA3-202ENST00000314759 TRIOO75962 3097 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms