RNA–Protein interactions for RNA: ENST00000312989.11

PPP1CA-201, Transcript of protein phosphatase 1 catalytic subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene PPP1CA, Length 1,389 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CA-201ENST00000312989 USP43Q70EL4 1123 aa12.15□□□□□ -0.46
PPP1CA-201ENST00000312989 SSX6Q7RTT6 188 aa12.15□□□□□ -0.46
PPP1CA-201ENST00000312989 FAM90A1Q86YD7 464 aa12.15□□□□□ -0.46
PPP1CA-201ENST00000312989 OR11L1Q8NGX0 322 aa12.15□□□□□ -0.46
PPP1CA-201ENST00000312989 PPP1R14AQ96A00 147 aa12.15□□□□□ -0.46
PPP1CA-201ENST00000312989 IL4I1Q96RQ9 567 aa12.15□□□□□ -0.46
PPP1CA-201ENST00000312989 CNN2Q99439 309 aaKnown RBP12.15□□□□□ -0.46
PPP1CA-201ENST00000312989 TTTY10Q9BZA0 68 aa12.15□□□□□ -0.46
PPP1CA-201ENST00000312989 TENM1Q9UKZ4 2725 aa12.14□□□□□ -0.47
PPP1CA-201ENST00000312989 A0A0A6YYJ9 748 aa12.14□□□□□ -0.47
PPP1CA-201ENST00000312989 A0A0U1RQV5 110 aa12.14□□□□□ -0.47
PPP1CA-201ENST00000312989 A0A1B0GW55 424 aa12.14□□□□□ -0.47
PPP1CA-201ENST00000312989 SAC3D1A6NKF1 404 aa12.14□□□□□ -0.47
PPP1CA-201ENST00000312989 ANKRD30BLA7E2S9 258 aa12.14□□□□□ -0.47
PPP1CA-201ENST00000312989 GRPP07492 148 aa12.14□□□□□ -0.47
PPP1CA-201ENST00000312989 DUX4L2P0CJ85 424 aa12.14□□□□□ -0.47
PPP1CA-201ENST00000312989 DUX4L3P0CJ86 424 aa12.14□□□□□ -0.47
PPP1CA-201ENST00000312989 DUX4L4P0CJ87 422 aa12.14□□□□□ -0.47
PPP1CA-201ENST00000312989 DUX4L5P0CJ88 424 aa12.14□□□□□ -0.47
PPP1CA-201ENST00000312989 DUX4L6P0CJ89 424 aa12.14□□□□□ -0.47
PPP1CA-201ENST00000312989 DUX4L7P0CJ90 424 aa12.14□□□□□ -0.47
PPP1CA-201ENST00000312989 CFL1P23528 166 aaKnown RBP12.14□□□□□ -0.47
PPP1CA-201ENST00000312989 CFHR2P36980 270 aa12.14□□□□□ -0.47
PPP1CA-201ENST00000312989 PITPNBP48739 271 aa12.14□□□□□ -0.47
PPP1CA-201ENST00000312989 FAM76BQ5HYJ3 339 aa12.14□□□□□ -0.47
PPP1CA-201ENST00000312989 LCN1P1Q5VSP4 162 aa12.14□□□□□ -0.47
PPP1CA-201ENST00000312989 SFRP4Q6FHJ7 346 aaPredicted RBP12.14□□□□□ -0.47
PPP1CA-201ENST00000312989 DUX4L9Q6RFH8 374 aaPredicted RBP12.14□□□□□ -0.47
PPP1CA-201ENST00000312989 ZNF679Q8IYX0 411 aa12.14□□□□□ -0.47
PPP1CA-201ENST00000312989 GALNT4Q8N4A0 578 aa12.14□□□□□ -0.47
PPP1CA-201ENST00000312989 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.14□□□□□ -0.47
PPP1CA-201ENST00000312989 NANPQ8TBE9 248 aa12.14□□□□□ -0.47
PPP1CA-201ENST00000312989 OR5P3Q8WZ94 311 aa12.14□□□□□ -0.47
PPP1CA-201ENST00000312989 RNF166Q96A37 237 aaPredicted RBP12.14□□□□□ -0.47
PPP1CA-201ENST00000312989 SEH1LQ96EE3 360 aa12.14□□□□□ -0.47
PPP1CA-201ENST00000312989 SLC6A7Q99884 636 aa12.14□□□□□ -0.47
PPP1CA-201ENST00000312989 SP140LQ9H930 580 aa12.14□□□□□ -0.47
PPP1CA-201ENST00000312989 DUX4Q9UBX2 424 aa12.14□□□□□ -0.47
PPP1CA-201ENST00000312989 MRM2Q9UI43 246 aaKnown RBP12.14□□□□□ -0.47
PPP1CA-201ENST00000312989 KIR2DS1A0A191URI9 304 aa12.13□□□□□ -0.47
PPP1CA-201ENST00000312989 OOEPA6NGQ2 149 aa12.13□□□□□ -0.47
PPP1CA-201ENST00000312989 SLC22A31A6NKX4 558 aa12.13□□□□□ -0.47
PPP1CA-201ENST00000312989 ZNF254O75437 659 aa12.13□□□□□ -0.47
PPP1CA-201ENST00000312989 RGS9O75916 674 aaPredicted RBP12.13□□□□□ -0.47
PPP1CA-201ENST00000312989 ALPLP05186 524 aa12.13□□□□□ -0.47
PPP1CA-201ENST00000312989 PPIAL4GP0DN37 164 aa12.13□□□□□ -0.47
PPP1CA-201ENST00000312989 PRDX4Q13162 271 aa12.13□□□□□ -0.47
PPP1CA-201ENST00000312989 ZNF684Q5T5D7 378 aa12.13□□□□□ -0.47
PPP1CA-201ENST00000312989 Q6ZSR3 168 aa12.13□□□□□ -0.47
PPP1CA-201ENST00000312989 KRT77Q7Z794 578 aa12.13□□□□□ -0.47
PPP1CA-201ENST00000312989 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.13□□□□□ -0.47
PPP1CA-201ENST00000312989 SLC35F2Q8IXU6 374 aa12.13□□□□□ -0.47
PPP1CA-201ENST00000312989 FGFRL1Q8N441 504 aa12.13□□□□□ -0.47
PPP1CA-201ENST00000312989 TEX29Q8N6K0 151 aa12.13□□□□□ -0.47
PPP1CA-201ENST00000312989 ZDHHC22Q8N966 263 aa12.13□□□□□ -0.47
PPP1CA-201ENST00000312989 CSNK2A3Q8NEV1 391 aa12.13□□□□□ -0.47
PPP1CA-201ENST00000312989 RAB40AQ8WXH6 277 aa12.13□□□□□ -0.47
PPP1CA-201ENST00000312989 UPRTQ96BW1 309 aa12.13□□□□□ -0.47
PPP1CA-201ENST00000312989 C1orf147Q96MC9 270 aaPredicted RBP12.13□□□□□ -0.47
PPP1CA-201ENST00000312989 ZNF48Q96MX3 618 aaPredicted RBP12.13□□□□□ -0.47
PPP1CA-201ENST00000312989 PAPOLGQ9BWT3 736 aaKnown RBP12.13□□□□□ -0.47
PPP1CA-201ENST00000312989 TEX12Q9BXU0 123 aa12.13□□□□□ -0.47
PPP1CA-201ENST00000312989 PBOV1Q9GZY1 135 aa12.13□□□□□ -0.47
PPP1CA-201ENST00000312989 RNPEPL1Q9HAU8 725 aa12.13□□□□□ -0.47
PPP1CA-201ENST00000312989 USE1Q9NZ43 259 aa12.13□□□□□ -0.47
PPP1CA-201ENST00000312989 ZNF69Q9UC07 566 aa12.13□□□□□ -0.47
PPP1CA-201ENST00000312989 OR5V1Q9UGF6 321 aa12.13□□□□□ -0.47
PPP1CA-201ENST00000312989 NUFIP1Q9UHK0 495 aaKnown RBP12.13□□□□□ -0.47
PPP1CA-201ENST00000312989 AUP1Q9Y679 476 aa12.13□□□□□ -0.47
PPP1CA-201ENST00000312989 TMEM269A0A1B0GVZ9 245 aa12.12□□□□□ -0.47
PPP1CA-201ENST00000312989 ACOD1A6NK06 481 aa12.12□□□□□ -0.47
PPP1CA-201ENST00000312989 ZNF850A8MQ14 1090 aa12.12□□□□□ -0.47
PPP1CA-201ENST00000312989 PHYHO14832 338 aa12.12□□□□□ -0.47
PPP1CA-201ENST00000312989 CIB2O75838 187 aa12.12□□□□□ -0.47
PPP1CA-201ENST00000312989 TTRP02766 147 aa12.12□□□□□ -0.47
PPP1CA-201ENST00000312989 IGHV4-38-2P0DP08 117 aa12.12□□□□□ -0.47
PPP1CA-201ENST00000312989 IRF2P14316 349 aa12.12□□□□□ -0.47
PPP1CA-201ENST00000312989 CXCR4P61073 352 aa12.12□□□□□ -0.47
PPP1CA-201ENST00000312989 GNB2P62879 340 aa12.12□□□□□ -0.47
PPP1CA-201ENST00000312989 LIPNQ5VXI9 398 aa12.12□□□□□ -0.47
PPP1CA-201ENST00000312989 KCTD18Q6PI47 426 aaPredicted RBP12.12□□□□□ -0.47
PPP1CA-201ENST00000312989 ZNF322Q6U7Q0 402 aaPredicted RBP12.12□□□□□ -0.47
PPP1CA-201ENST00000312989 PLEKHG7Q6ZR37 379 aa12.12□□□□□ -0.47
PPP1CA-201ENST00000312989 BCL6BQ8N143 479 aaPredicted RBP12.12□□□□□ -0.47
PPP1CA-201ENST00000312989 OR8B3Q8NGG8 313 aa12.12□□□□□ -0.47
PPP1CA-201ENST00000312989 OR8S1Q8NH09 359 aa12.12□□□□□ -0.47
PPP1CA-201ENST00000312989 ASB17Q8WXJ9 295 aa12.12□□□□□ -0.47
PPP1CA-201ENST00000312989 C22orf15Q8WYQ4 148 aa12.12□□□□□ -0.47
PPP1CA-201ENST00000312989 UBE2FQ969M7 185 aa12.12□□□□□ -0.47
PPP1CA-201ENST00000312989 OR8B2Q96RD0 313 aa12.12□□□□□ -0.47
PPP1CA-201ENST00000312989 APOL4Q9BPW4 351 aa12.12□□□□□ -0.47
PPP1CA-201ENST00000312989 PRRG3Q9BZD7 231 aa12.12□□□□□ -0.47
PPP1CA-201ENST00000312989 OCEL1Q9H607 264 aa12.12□□□□□ -0.47
PPP1CA-201ENST00000312989 C14orf119Q9NWQ9 140 aa12.12□□□□□ -0.47
PPP1CA-201ENST00000312989 CLN6Q9NWW5 311 aa12.12□□□□□ -0.47
PPP1CA-201ENST00000312989 KAAG1Q9UBP8 84 aa12.12□□□□□ -0.47
PPP1CA-201ENST00000312989 ZNF391Q9UJN7 358 aa12.12□□□□□ -0.47
PPP1CA-201ENST00000312989 MPC1Q9Y5U8 109 aa12.12□□□□□ -0.47
PPP1CA-201ENST00000312989 SOX21Q9Y651 276 aaPredicted RBP12.12□□□□□ -0.47
PPP1CA-201ENST00000312989 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms