RNA–Protein interactions for RNA: ENST00000312849.4

LSMEM1-201, Transcript of leucine rich single-pass membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSMEM1, Length 1,870 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSMEM1-201ENST00000312849 NAA11Q9BSU3 229 aaPredicted RBP8.51□□□□□ -1.05
LSMEM1-201ENST00000312849 WDR54Q9H977 334 aa8.51□□□□□ -1.05
LSMEM1-201ENST00000312849 FN3KRPQ9HA64 309 aa8.51□□□□□ -1.05
LSMEM1-201ENST00000312849 DNAJB11Q9UBS4 358 aa8.51□□□□□ -1.05
LSMEM1-201ENST00000312849 WNT16Q9UBV4 365 aa8.51□□□□□ -1.05
LSMEM1-201ENST00000312849 ATXN7L1Q9ULK2 861 aaPredicted RBP8.51□□□□□ -1.05
LSMEM1-201ENST00000312849 CSAG2Q9Y5P2 127 aa8.51□□□□□ -1.05
LSMEM1-201ENST00000312849 ARID1BQ8NFD5 2236 aaPredicted RBP8.51□□□□□ -1.05
LSMEM1-201ENST00000312849 SERPINE3A8MV23 424 aa8.51□□□□□ -1.05
LSMEM1-201ENST00000312849 TOR1AO14656 332 aa8.51□□□□□ -1.05
LSMEM1-201ENST00000312849 SMAD9O15198 467 aaKnown RBP8.51□□□□□ -1.05
LSMEM1-201ENST00000312849 RER1O15258 196 aa8.51□□□□□ -1.05
LSMEM1-201ENST00000312849 TIAF1O95411 115 aa8.51□□□□□ -1.05
LSMEM1-201ENST00000312849 NAT2P11245 290 aa8.51□□□□□ -1.05
LSMEM1-201ENST00000312849 PTGFRP43088 359 aa8.51□□□□□ -1.05
LSMEM1-201ENST00000312849 CSNK1A1P48729 337 aa8.51□□□□□ -1.05
LSMEM1-201ENST00000312849 TMEM50BP56557 158 aa8.51□□□□□ -1.05
LSMEM1-201ENST00000312849 FOXL2P58012 376 aa8.51□□□□□ -1.05
LSMEM1-201ENST00000312849 MFAP5Q13361 173 aa8.51□□□□□ -1.05
LSMEM1-201ENST00000312849 ELP2Q6IA86 826 aa8.51□□□□□ -1.05
LSMEM1-201ENST00000312849 PRSS54Q6PEW0 395 aa8.51□□□□□ -1.05
LSMEM1-201ENST00000312849 OPN5Q6U736 354 aa8.51□□□□□ -1.05
LSMEM1-201ENST00000312849 LHFPL1Q86WI0 220 aa8.51□□□□□ -1.05
LSMEM1-201ENST00000312849 PPP1R3BQ86XI6 285 aa8.51□□□□□ -1.05
LSMEM1-201ENST00000312849 TDHQ8IZJ6 230 aa8.51□□□□□ -1.05
LSMEM1-201ENST00000312849 ARMC10Q8N2F6 343 aa8.51□□□□□ -1.05
LSMEM1-201ENST00000312849 TMEM104Q8NE00 496 aa8.51□□□□□ -1.05
LSMEM1-201ENST00000312849 BPIFCQ8NFQ6 507 aa8.51□□□□□ -1.05
LSMEM1-201ENST00000312849 OR51T1Q8NGJ9 327 aa8.51□□□□□ -1.05
LSMEM1-201ENST00000312849 EMG1Q92979 244 aaKnown RBP8.51□□□□□ -1.05
LSMEM1-201ENST00000312849 TMEM54Q969K7 222 aa8.51□□□□□ -1.05
LSMEM1-201ENST00000312849 FAM117AQ9C073 453 aa8.51□□□□□ -1.05
LSMEM1-201ENST00000312849 SLC6A15Q9H2J7 730 aa8.51□□□□□ -1.05
LSMEM1-201ENST00000312849 NELFAQ9H3P2 528 aa8.51□□□□□ -1.05
LSMEM1-201ENST00000312849 BANF2Q9H503 90 aa8.51□□□□□ -1.05
LSMEM1-201ENST00000312849 ZNF160Q9HCG1 818 aa8.51□□□□□ -1.05
LSMEM1-201ENST00000312849 TMEM100Q9NV29 134 aa8.51□□□□□ -1.05
LSMEM1-201ENST00000312849 MEMO1Q9Y316 297 aa8.51□□□□□ -1.05
LSMEM1-201ENST00000312849 V9GYS6 101 aa8.51□□□□□ -1.05
LSMEM1-201ENST00000312849 LOC102723996A0A087X1L8 192 aa8.5□□□□□ -1.05
LSMEM1-201ENST00000312849 IGHV5-10-1A0A0J9YXX1 117 aa8.5□□□□□ -1.05
LSMEM1-201ENST00000312849 MTRF1O75570 445 aaKnown RBP8.5□□□□□ -1.05
LSMEM1-201ENST00000312849 ZNF17P17021 662 aa8.5□□□□□ -1.05
LSMEM1-201ENST00000312849 CLDN17P56750 224 aa8.5□□□□□ -1.05
LSMEM1-201ENST00000312849 HIST1H3AP68431 136 aa8.5□□□□□ -1.05
LSMEM1-201ENST00000312849 CCL7P80098 99 aa8.5□□□□□ -1.05
LSMEM1-201ENST00000312849 MC2RQ01718 297 aa8.5□□□□□ -1.05
LSMEM1-201ENST00000312849 KISS1Q15726 138 aa8.5□□□□□ -1.05
LSMEM1-201ENST00000312849 SMAD2Q15796 467 aaKnown RBP8.5□□□□□ -1.05
LSMEM1-201ENST00000312849 STK11Q15831 433 aa8.5□□□□□ -1.05
LSMEM1-201ENST00000312849 SGCAQ16586 387 aa8.5□□□□□ -1.05
LSMEM1-201ENST00000312849 GFOD2Q3B7J2 385 aa8.5□□□□□ -1.05
LSMEM1-201ENST00000312849 BEX5Q5H9J7 111 aa8.5□□□□□ -1.05
LSMEM1-201ENST00000312849 HIST2H3PS2Q5TEC6 136 aa8.5□□□□□ -1.05
LSMEM1-201ENST00000312849 HIST2H3AQ71DI3 136 aa8.5□□□□□ -1.05
LSMEM1-201ENST00000312849 SLC16A14Q7RTX9 510 aa8.5□□□□□ -1.05
LSMEM1-201ENST00000312849 BAP18Q8IXM2 172 aa8.5□□□□□ -1.05
LSMEM1-201ENST00000312849 WDSUB1Q8N9V3 476 aa8.5□□□□□ -1.05
LSMEM1-201ENST00000312849 RNF141Q8WVD5 230 aa8.5□□□□□ -1.05
LSMEM1-201ENST00000312849 ARL11Q969Q4 196 aa8.5□□□□□ -1.05
LSMEM1-201ENST00000312849 LRRC46Q96FV0 321 aa8.5□□□□□ -1.05
LSMEM1-201ENST00000312849 ARHGAP5-AS1Q96IT6 56 aa8.5□□□□□ -1.05
LSMEM1-201ENST00000312849 C2orf50Q96LR7 162 aa8.5□□□□□ -1.05
LSMEM1-201ENST00000312849 SPACA5Q96QH8 159 aa8.5□□□□□ -1.05
LSMEM1-201ENST00000312849 S100A13Q99584 98 aa8.5□□□□□ -1.05
LSMEM1-201ENST00000312849 RNF126Q9BV68 326 aa8.5□□□□□ -1.05
LSMEM1-201ENST00000312849 TM2D1Q9BX74 207 aa8.5□□□□□ -1.05
LSMEM1-201ENST00000312849 MS4A7Q9GZW8 240 aaPredicted RBP8.5□□□□□ -1.05
LSMEM1-201ENST00000312849 C5orf66Q9H5L9 145 aa8.5□□□□□ -1.05
LSMEM1-201ENST00000312849 UBE2ZQ9H832 354 aaPredicted RBP8.5□□□□□ -1.05
LSMEM1-201ENST00000312849 ZNF319Q9P2F9 582 aa8.5□□□□□ -1.05
LSMEM1-201ENST00000312849 OSGIN2Q9Y236 505 aa8.5□□□□□ -1.05
LSMEM1-201ENST00000312849 PRELID1Q9Y255 219 aa8.5□□□□□ -1.05
LSMEM1-201ENST00000312849 REV3LO60673 3130 aa8.5□□□□□ -1.05
LSMEM1-201ENST00000312849 IGKV1-9A0A0C4DH69 117 aa8.49□□□□□ -1.05
LSMEM1-201ENST00000312849 FOXI3A8MTJ6 420 aaPredicted RBP8.49□□□□□ -1.05
LSMEM1-201ENST00000312849 DHRS3O75911 302 aa8.49□□□□□ -1.05
LSMEM1-201ENST00000312849 SLC2A1P11166 492 aa8.49□□□□□ -1.05
LSMEM1-201ENST00000312849 CD79AP11912 226 aa8.49□□□□□ -1.05
LSMEM1-201ENST00000312849 PGAM2P15259 253 aa8.49□□□□□ -1.05
LSMEM1-201ENST00000312849 CPT2P23786 658 aa8.49□□□□□ -1.05
LSMEM1-201ENST00000312849 EPHA8P29322 1005 aaPredicted RBP8.49□□□□□ -1.05
LSMEM1-201ENST00000312849 SFTPDP35247 375 aa8.49□□□□□ -1.05
LSMEM1-201ENST00000312849 CXCL12P48061 93 aa8.49□□□□□ -1.05
LSMEM1-201ENST00000312849 SLC6A9P48067 706 aa8.49□□□□□ -1.05
LSMEM1-201ENST00000312849 NPY4RP50391 375 aa8.49□□□□□ -1.05
LSMEM1-201ENST00000312849 CSNK2A1P68400 391 aaPredicted RBP8.49□□□□□ -1.05
LSMEM1-201ENST00000312849 H3F3AP84243 136 aa8.49□□□□□ -1.05
LSMEM1-201ENST00000312849 AIMP2Q13155 320 aaKnown RBP8.49□□□□□ -1.05
LSMEM1-201ENST00000312849 EXT1Q16394 746 aa8.49□□□□□ -1.05
LSMEM1-201ENST00000312849 EIF5AL1Q6IS14 154 aaKnown RBP8.49□□□□□ -1.05
LSMEM1-201ENST00000312849 MRPL14Q6P1L8 145 aaKnown RBP8.49□□□□□ -1.05
LSMEM1-201ENST00000312849 GUSBP11Q6P575 273 aa8.49□□□□□ -1.05
LSMEM1-201ENST00000312849 CLEC18BQ6UXF7 455 aa8.49□□□□□ -1.05
LSMEM1-201ENST00000312849 CSNK2A3Q8NEV1 391 aa8.49□□□□□ -1.05
LSMEM1-201ENST00000312849 OR52H1Q8NGJ2 320 aa8.49□□□□□ -1.05
LSMEM1-201ENST00000312849 OR2I1PQ8NGU4 316 aa8.49□□□□□ -1.05
LSMEM1-201ENST00000312849 NAT6Q93015 286 aa8.49□□□□□ -1.05
LSMEM1-201ENST00000312849 TMEM230Q96A57 120 aa8.49□□□□□ -1.05
LSMEM1-201ENST00000312849 CLDN23Q96B33 292 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms