RNA–Protein interactions for RNA: ENST00000312481.11

COL6A5-202, Transcript of collagen type VI alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL6A5, Length 9,226 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A5-202ENST00000312481 CSN1S1P47710 185 aa7.96□□□□□ -1.14
COL6A5-202ENST00000312481 ODF4Q2M2E3 257 aa7.96□□□□□ -1.14
COL6A5-202ENST00000312481 KHDC3LQ587J8 217 aa7.96□□□□□ -1.14
COL6A5-202ENST00000312481 ZNF542PQ5EBM4 170 aa7.96□□□□□ -1.14
COL6A5-202ENST00000312481 DGAT2L6Q6ZPD8 337 aa7.96□□□□□ -1.14
COL6A5-202ENST00000312481 ZNF740Q8NDX6 193 aa7.96□□□□□ -1.14
COL6A5-202ENST00000312481 PTP4A1Q93096 173 aa7.96□□□□□ -1.14
COL6A5-202ENST00000312481 LRP3O75074 770 aa7.96□□□□□ -1.14
COL6A5-202ENST00000312481 CTAG2O75638 210 aa7.96□□□□□ -1.14
COL6A5-202ENST00000312481 BIDP55957 195 aa7.96□□□□□ -1.14
COL6A5-202ENST00000312481 CARD18P57730 90 aa7.96□□□□□ -1.14
COL6A5-202ENST00000312481 OR5T1Q8NG75 326 aa7.96□□□□□ -1.14
COL6A5-202ENST00000312481 PMEPA1Q969W9 287 aa7.96□□□□□ -1.14
COL6A5-202ENST00000312481 A0A1B0GU03 582 aa7.96□□□□□ -1.14
COL6A5-202ENST00000312481 VDAC1P21796 283 aa7.96□□□□□ -1.14
COL6A5-202ENST00000312481 RAD52P43351 418 aa7.96□□□□□ -1.14
COL6A5-202ENST00000312481 C2orf76Q3KRA6 126 aa7.96□□□□□ -1.14
COL6A5-202ENST00000312481 BCORP1Q8N888 145 aa7.96□□□□□ -1.14
COL6A5-202ENST00000312481 OR4S1Q8NGB4 309 aa7.96□□□□□ -1.14
COL6A5-202ENST00000312481 IL22RA2Q969J5 263 aa7.96□□□□□ -1.14
COL6A5-202ENST00000312481 ASB16Q96NS5 453 aa7.96□□□□□ -1.14
COL6A5-202ENST00000312481 TRAV9-1A0A075B6T8 112 aa7.96□□□□□ -1.14
COL6A5-202ENST00000312481 RNASEK-C17orf49H0YIS7 233 aa7.96□□□□□ -1.14
COL6A5-202ENST00000312481 FCGR2CP31995 323 aa7.96□□□□□ -1.14
COL6A5-202ENST00000312481 CCR6P51684 374 aa7.96□□□□□ -1.14
COL6A5-202ENST00000312481 RPS18P62269 152 aaKnown RBP7.96□□□□□ -1.14
COL6A5-202ENST00000312481 RPL18Q07020 188 aaKnown RBP7.96□□□□□ -1.14
COL6A5-202ENST00000312481 EIF4EBP2Q13542 120 aaPredicted RBP7.96□□□□□ -1.14
COL6A5-202ENST00000312481 INPP5JQ15735 1006 aaPredicted RBP7.96□□□□□ -1.14
COL6A5-202ENST00000312481 AAED1Q7RTV5 226 aa7.96□□□□□ -1.14
COL6A5-202ENST00000312481 BAGE3Q86Y29 109 aa7.96□□□□□ -1.14
COL6A5-202ENST00000312481 BAGE2Q86Y30 109 aa7.96□□□□□ -1.14
COL6A5-202ENST00000312481 OR10P1Q8NGE3 313 aa7.96□□□□□ -1.14
COL6A5-202ENST00000312481 NOL4LQ96MY1 436 aaPredicted RBP7.96□□□□□ -1.14
COL6A5-202ENST00000312481 H3BQ06 376 aaPredicted RBP7.95□□□□□ -1.14
COL6A5-202ENST00000312481 MPC2O95563 127 aa7.95□□□□□ -1.14
COL6A5-202ENST00000312481 EIF4EP06730 217 aaKnown RBP7.95□□□□□ -1.14
COL6A5-202ENST00000312481 MEOX2P50222 304 aa7.95□□□□□ -1.14
COL6A5-202ENST00000312481 SCGB2A2Q13296 93 aa7.95□□□□□ -1.14
COL6A5-202ENST00000312481 NLRC3Q7RTR2 1065 aa7.95□□□□□ -1.14
COL6A5-202ENST00000312481 SFT2D1Q8WV19 159 aa7.95□□□□□ -1.14
COL6A5-202ENST00000312481 NIT2Q9NQR4 276 aa7.95□□□□□ -1.14
COL6A5-202ENST00000312481 KCMF1Q9P0J7 381 aa7.95□□□□□ -1.14
COL6A5-202ENST00000312481 SOCS6O14544 535 aa7.95□□□□□ -1.14
COL6A5-202ENST00000312481 DSCR4P56555 118 aaPredicted RBP7.95□□□□□ -1.14
COL6A5-202ENST00000312481 MRPS34P82930 218 aaKnown RBP7.95□□□□□ -1.14
COL6A5-202ENST00000312481 ERHP84090 104 aaKnown RBP7.95□□□□□ -1.14
COL6A5-202ENST00000312481 PAQR6Q6TCH4 344 aa7.95□□□□□ -1.14
COL6A5-202ENST00000312481 FJX1Q86VR8 437 aa7.95□□□□□ -1.14
COL6A5-202ENST00000312481 C9orf62Q8N4C0 152 aa7.95□□□□□ -1.14
COL6A5-202ENST00000312481 OR4Q3Q8NH05 313 aa7.95□□□□□ -1.14
COL6A5-202ENST00000312481 RASD2Q96D21 266 aa7.95□□□□□ -1.14
COL6A5-202ENST00000312481 PELI1Q96FA3 418 aa7.95□□□□□ -1.14
COL6A5-202ENST00000312481 SLC35E1Q96K37 410 aa7.95□□□□□ -1.14
COL6A5-202ENST00000312481 CHODLQ9H9P2 273 aa7.95□□□□□ -1.14
COL6A5-202ENST00000312481 ADGRL4Q9HBW9 690 aa7.95□□□□□ -1.14
COL6A5-202ENST00000312481 CGGBP1Q9UFW8 167 aaPredicted RBP7.95□□□□□ -1.14
COL6A5-202ENST00000312481 PDGFBP01127 241 aaPredicted RBP7.95□□□□□ -1.14
COL6A5-202ENST00000312481 CD1CP29017 333 aa7.95□□□□□ -1.14
COL6A5-202ENST00000312481 CYB561P49447 251 aa7.95□□□□□ -1.14
COL6A5-202ENST00000312481 NPY4RP50391 375 aa7.95□□□□□ -1.14
COL6A5-202ENST00000312481 CLN3Q13286 438 aa7.95□□□□□ -1.14
COL6A5-202ENST00000312481 RAB6CQ53S08 254 aa7.95□□□□□ -1.14
COL6A5-202ENST00000312481 FAM57BQ71RH2 274 aa7.95□□□□□ -1.14
COL6A5-202ENST00000312481 FAM3CQ92520 227 aa7.95□□□□□ -1.14
COL6A5-202ENST00000312481 RAB6CQ9H0N0 254 aa7.95□□□□□ -1.14
COL6A5-202ENST00000312481 ACKR4Q9NPB9 350 aa7.95□□□□□ -1.14
COL6A5-202ENST00000312481 PLEKHB1Q9UF11 243 aaPredicted RBP7.95□□□□□ -1.14
COL6A5-202ENST00000312481 UPK1AO00322 258 aa7.95□□□□□ -1.14
COL6A5-202ENST00000312481 HEXAP06865 529 aa7.95□□□□□ -1.14
COL6A5-202ENST00000312481 GABRR1P24046 479 aa7.95□□□□□ -1.14
COL6A5-202ENST00000312481 UBE2G2P60604 165 aa7.95□□□□□ -1.14
COL6A5-202ENST00000312481 SUMO1P63165 101 aaKnown RBP7.95□□□□□ -1.14
COL6A5-202ENST00000312481 NKAIN1Q4KMZ8 207 aa7.95□□□□□ -1.14
COL6A5-202ENST00000312481 ACSM5Q6NUN0 579 aa7.95□□□□□ -1.14
COL6A5-202ENST00000312481 MPTX1A8MV57 137 aa7.95□□□□□ -1.14
COL6A5-202ENST00000312481 HRH1P35367 487 aa7.95□□□□□ -1.14
COL6A5-202ENST00000312481 C18orf21Q32NC0 220 aaPredicted RBP7.95□□□□□ -1.14
COL6A5-202ENST00000312481 TMEM81Q6P7N7 255 aa7.95□□□□□ -1.14
COL6A5-202ENST00000312481 MRPL52Q86TS9 123 aaKnown RBP7.95□□□□□ -1.14
COL6A5-202ENST00000312481 TP53INP2Q8IXH6 220 aa7.95□□□□□ -1.14
COL6A5-202ENST00000312481 SLC35G3Q8N808 338 aa7.95□□□□□ -1.14
COL6A5-202ENST00000312481 OR13C9Q8NGT0 318 aa7.95□□□□□ -1.14
COL6A5-202ENST00000312481 FAM71F1Q96KD3 344 aaPredicted RBP7.95□□□□□ -1.14
COL6A5-202ENST00000312481 KLF13Q9Y2Y9 288 aaPredicted RBP7.95□□□□□ -1.14
COL6A5-202ENST00000312481 HOXB5P09067 269 aa7.95□□□□□ -1.14
COL6A5-202ENST00000312481 GABRA1P14867 456 aa7.95□□□□□ -1.14
COL6A5-202ENST00000312481 ACKR3P25106 362 aa7.95□□□□□ -1.14
COL6A5-202ENST00000312481 SRP14P37108 136 aaKnown RBP7.95□□□□□ -1.14
COL6A5-202ENST00000312481 VIPR2P41587 438 aa7.95□□□□□ -1.14
COL6A5-202ENST00000312481 FXYD4P59646 89 aa7.95□□□□□ -1.14
COL6A5-202ENST00000312481 HLXQ14774 488 aaPredicted RBP7.95□□□□□ -1.14
COL6A5-202ENST00000312481 C18orf63Q68DL7 685 aa7.95□□□□□ -1.14
COL6A5-202ENST00000312481 COX15Q7KZN9 410 aa7.95□□□□□ -1.14
COL6A5-202ENST00000312481 RHBDD3Q9Y3P4 386 aa7.95□□□□□ -1.14
COL6A5-202ENST00000312481 V9GYH0 126 aa7.95□□□□□ -1.14
COL6A5-202ENST00000312481 ALOX12BO75342 701 aa7.95□□□□□ -1.14
COL6A5-202ENST00000312481 NME1P15531 152 aaKnown RBP7.95□□□□□ -1.14
COL6A5-202ENST00000312481 ID2Q02363 134 aa7.95□□□□□ -1.14
COL6A5-202ENST00000312481 PHYHD1Q5SRE7 291 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms