RNA–Protein interactions for RNA: ENST00000310301.8

VPS41-202, Transcript of VPS41, HOPS complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS41, Length 5,903 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-202ENST00000310301 C5orf46Q6UWT4 87 aa7.4□□□□□ -1.23
VPS41-202ENST00000310301 GFRALQ6UXV0 394 aa7.4□□□□□ -1.23
VPS41-202ENST00000310301 DND1Q8IYX4 353 aaKnown RBP7.4□□□□□ -1.23
VPS41-202ENST00000310301 TCTEX1D1Q8N7M0 179 aa7.4□□□□□ -1.23
VPS41-202ENST00000310301 OR10P1Q8NGE3 313 aa7.4□□□□□ -1.23
VPS41-202ENST00000310301 EMG1Q92979 244 aaKnown RBP7.4□□□□□ -1.23
VPS41-202ENST00000310301 OR2A14Q96R47 310 aa7.4□□□□□ -1.23
VPS41-202ENST00000310301 MAGT1Q9H0U3 335 aa7.4□□□□□ -1.23
VPS41-202ENST00000310301 ASIC5Q9NY37 505 aa7.4□□□□□ -1.23
VPS41-202ENST00000310301 TRAPPC4Q9Y296 219 aa7.4□□□□□ -1.23
VPS41-202ENST00000310301 DBX1A6NMT0 343 aa7.39□□□□□ -1.23
VPS41-202ENST00000310301 B4E171 279 aa7.39□□□□□ -1.23
VPS41-202ENST00000310301 H0YIG0 161 aa7.39□□□□□ -1.23
VPS41-202ENST00000310301 XRCC2O43543 280 aa7.39□□□□□ -1.23
VPS41-202ENST00000310301 TIMM8AO60220 97 aaPredicted RBP7.39□□□□□ -1.23
VPS41-202ENST00000310301 RRASP10301 218 aa7.39□□□□□ -1.23
VPS41-202ENST00000310301 TSPAN7P41732 249 aa7.39□□□□□ -1.23
VPS41-202ENST00000310301 SLC35A1P78382 337 aa7.39□□□□□ -1.23
VPS41-202ENST00000310301 SLC25A35Q3KQZ1 300 aa7.39□□□□□ -1.23
VPS41-202ENST00000310301 ZNF813Q6ZN06 617 aa7.39□□□□□ -1.23
VPS41-202ENST00000310301 SLC38A9Q8NBW4 561 aa7.39□□□□□ -1.23
VPS41-202ENST00000310301 OR2AE1Q8NHA4 323 aa7.39□□□□□ -1.23
VPS41-202ENST00000310301 APH1AQ96BI3 265 aa7.39□□□□□ -1.23
VPS41-202ENST00000310301 MS4A8Q9BY19 250 aa7.39□□□□□ -1.23
VPS41-202ENST00000310301 ISG20L2Q9H9L3 353 aaKnown RBP7.39□□□□□ -1.23
VPS41-202ENST00000310301 PSENENQ9NZ42 101 aa7.39□□□□□ -1.23
VPS41-202ENST00000310301 A0A1W2PQF6 199 aa7.39□□□□□ -1.23
VPS41-202ENST00000310301 DEGS1O15121 323 aa7.39□□□□□ -1.23
VPS41-202ENST00000310301 AGFG2O95081 481 aa7.39□□□□□ -1.23
VPS41-202ENST00000310301 PGFP49763 221 aa7.39□□□□□ -1.23
VPS41-202ENST00000310301 PMP22Q01453 160 aa7.39□□□□□ -1.23
VPS41-202ENST00000310301 FAM71E1Q6IPT2 247 aa7.39□□□□□ -1.23
VPS41-202ENST00000310301 PRR27Q6MZM9 219 aa7.39□□□□□ -1.23
VPS41-202ENST00000310301 CXorf58Q96LI9 332 aa7.39□□□□□ -1.23
VPS41-202ENST00000310301 WDR83Q9BRX9 315 aaKnown RBP7.39□□□□□ -1.23
VPS41-202ENST00000310301 SLIRPQ9GZT3 109 aaKnown RBP7.39□□□□□ -1.23
VPS41-202ENST00000310301 SHARPINQ9H0F6 387 aa7.39□□□□□ -1.23
VPS41-202ENST00000310301 ZNFX1Q9P2E3 1918 aaKnown RBP7.39□□□□□ -1.23
VPS41-202ENST00000310301 PRAMEF25A6NGN4 478 aa7.39□□□□□ -1.23
VPS41-202ENST00000310301 GLSO94925 669 aaPredicted RBP7.39□□□□□ -1.23
VPS41-202ENST00000310301 COX5AP20674 150 aa7.39□□□□□ -1.23
VPS41-202ENST00000310301 HSD17B7P56937 341 aa7.39□□□□□ -1.23
VPS41-202ENST00000310301 ST3GAL2Q16842 350 aa7.39□□□□□ -1.23
VPS41-202ENST00000310301 PRAMEF5Q5TYX0 476 aa7.39□□□□□ -1.23
VPS41-202ENST00000310301 PRAMEF6Q5VXH4 476 aa7.39□□□□□ -1.23
VPS41-202ENST00000310301 MED25Q71SY5 747 aa7.39□□□□□ -1.23
VPS41-202ENST00000310301 AAED1Q7RTV5 226 aa7.39□□□□□ -1.23
VPS41-202ENST00000310301 IL22RA2Q969J5 263 aa7.39□□□□□ -1.23
VPS41-202ENST00000310301 CMTM3Q96MX0 182 aa7.39□□□□□ -1.23
VPS41-202ENST00000310301 FBXO34Q9NWN3 711 aa7.39□□□□□ -1.23
VPS41-202ENST00000310301 HMX2A2RU54 273 aa7.39□□□□□ -1.23
VPS41-202ENST00000310301 ZNF732B4DXR9 585 aa7.39□□□□□ -1.23
VPS41-202ENST00000310301 SPINT2O43291 252 aa7.39□□□□□ -1.23
VPS41-202ENST00000310301 ZNF207O43670 478 aaKnown RBP7.39□□□□□ -1.23
VPS41-202ENST00000310301 DEFA4P12838 97 aa7.39□□□□□ -1.23
VPS41-202ENST00000310301 TAS2R45P59539 299 aa7.39□□□□□ -1.23
VPS41-202ENST00000310301 ERVFC1-1P60608 527 aa7.39□□□□□ -1.23
VPS41-202ENST00000310301 PJVKQ0ZLH3 352 aa7.39□□□□□ -1.23
VPS41-202ENST00000310301 MYBPHQ13203 477 aa7.39□□□□□ -1.23
VPS41-202ENST00000310301 SSPNQ14714 243 aa7.39□□□□□ -1.23
VPS41-202ENST00000310301 TFAP2EQ6VUC0 442 aa7.39□□□□□ -1.23
VPS41-202ENST00000310301 STAC2Q6ZMT1 411 aa7.39□□□□□ -1.23
VPS41-202ENST00000310301 VRK3Q8IV63 474 aa7.39□□□□□ -1.23
VPS41-202ENST00000310301 MISPQ8IVT2 679 aa7.39□□□□□ -1.23
VPS41-202ENST00000310301 CNEP1R1Q8N9A8 125 aa7.39□□□□□ -1.23
VPS41-202ENST00000310301 ZNF740Q8NDX6 193 aa7.39□□□□□ -1.23
VPS41-202ENST00000310301 LINC00615Q96LM1 132 aaPredicted RBP7.39□□□□□ -1.23
VPS41-202ENST00000310301 KIR2DS1A0A191URI9 304 aa7.39□□□□□ -1.23
VPS41-202ENST00000310301 A0A1W2PPH5 198 aa7.39□□□□□ -1.23
VPS41-202ENST00000310301 HIST1H1CP16403 213 aaKnown RBP7.39□□□□□ -1.23
VPS41-202ENST00000310301 KIR2DS4P43632 304 aa7.39□□□□□ -1.23
VPS41-202ENST00000310301 KCNJ3P48549 501 aa7.39□□□□□ -1.23
VPS41-202ENST00000310301 KIR2DS1Q14954 304 aa7.39□□□□□ -1.23
VPS41-202ENST00000310301 TMEM207Q6UWW9 146 aa7.39□□□□□ -1.23
VPS41-202ENST00000310301 DOK3Q7L591 496 aa7.39□□□□□ -1.23
VPS41-202ENST00000310301 ZNF383Q8NA42 475 aa7.39□□□□□ -1.23
VPS41-202ENST00000310301 SLC35E1Q96K37 410 aa7.39□□□□□ -1.23
VPS41-202ENST00000310301 MEGF10Q96KG7 1140 aa7.39□□□□□ -1.23
VPS41-202ENST00000310301 NOL4LQ96MY1 436 aaPredicted RBP7.39□□□□□ -1.23
VPS41-202ENST00000310301 OR8B4Q96RC9 309 aa7.39□□□□□ -1.23
VPS41-202ENST00000310301 CTSFQ9UBX1 484 aa7.39□□□□□ -1.23
VPS41-202ENST00000310301 MIOXQ9UGB7 285 aa7.39□□□□□ -1.23
VPS41-202ENST00000310301 MEIKINA0A087WXM9 373 aa7.38□□□□□ -1.23
VPS41-202ENST00000310301 OR7C2O60412 319 aa7.38□□□□□ -1.23
VPS41-202ENST00000310301 IL5P05113 134 aa7.38□□□□□ -1.23
VPS41-202ENST00000310301 RPL24P83731 157 aaKnown RBP7.38□□□□□ -1.23
VPS41-202ENST00000310301 OTUD1Q5VV17 481 aaPredicted RBP7.38□□□□□ -1.23
VPS41-202ENST00000310301 RNASEKQ6P5S7 137 aaKnown RBP7.38□□□□□ -1.23
VPS41-202ENST00000310301 WDR74Q6RFH5 385 aaPredicted RBP7.38□□□□□ -1.23
VPS41-202ENST00000310301 OR51E1Q8TCB6 317 aa7.38□□□□□ -1.23
VPS41-202ENST00000310301 SMIM4Q8WVI0 70 aa7.38□□□□□ -1.23
VPS41-202ENST00000310301 DLL4Q9NR61 685 aa7.38□□□□□ -1.23
VPS41-202ENST00000310301 SLC25A37Q9NYZ2 338 aa7.38□□□□□ -1.23
VPS41-202ENST00000310301 LHX6Q9UPM6 363 aa7.38□□□□□ -1.23
VPS41-202ENST00000310301 TEX50A0A1B0GTY4 177 aa7.38□□□□□ -1.23
VPS41-202ENST00000310301 SLCO2B1O94956 709 aa7.38□□□□□ -1.23
VPS41-202ENST00000310301 SMIM6P0DI80 62 aa7.38□□□□□ -1.23
VPS41-202ENST00000310301 ZNF17P17021 662 aa7.38□□□□□ -1.23
VPS41-202ENST00000310301 ZNF154Q13106 437 aa7.38□□□□□ -1.23
VPS41-202ENST00000310301 OR2B11Q5JQS5 317 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms