RNA–Protein interactions for RNA: ENST00000308987.5

CKS1B-201, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CKS1B, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-201ENST00000308987 OR10A4Q9H209 315 aa4.31□□□□□ -1.72
CKS1B-201ENST00000308987 SLC25A32Q9H2D1 315 aa4.31□□□□□ -1.72
CKS1B-201ENST00000308987 C1orf198Q9H425 327 aa4.31□□□□□ -1.72
CKS1B-201ENST00000308987 LDAHQ9H6V9 325 aa4.31□□□□□ -1.72
CKS1B-201ENST00000308987 AUNIPQ9H7T9 357 aa4.31□□□□□ -1.72
CKS1B-201ENST00000308987 SCPEP1Q9HB40 452 aa4.31□□□□□ -1.72
CKS1B-201ENST00000308987 ZNF304Q9HCX3 659 aa4.31□□□□□ -1.72
CKS1B-201ENST00000308987 Q9N2J8 555 aa4.31□□□□□ -1.72
CKS1B-201ENST00000308987 CHST11Q9NPF2 352 aa4.31□□□□□ -1.72
CKS1B-201ENST00000308987 FBXO34Q9NWN3 711 aa4.31□□□□□ -1.72
CKS1B-201ENST00000308987 SDHAF2Q9NX18 166 aa4.31□□□□□ -1.72
CKS1B-201ENST00000308987 ANKRD10Q9NXR5 420 aa4.31□□□□□ -1.72
CKS1B-201ENST00000308987 ZNF224Q9NZL3 707 aa4.31□□□□□ -1.72
CKS1B-201ENST00000308987 STEAP1Q9UHE8 339 aa4.31□□□□□ -1.72
CKS1B-201ENST00000308987 OPN4Q9UHM6 478 aa4.31□□□□□ -1.72
CKS1B-201ENST00000308987 NXT1Q9UKK6 140 aaKnown RBP4.31□□□□□ -1.72
CKS1B-201ENST00000308987 COPS3Q9UNS2 423 aa4.31□□□□□ -1.72
CKS1B-201ENST00000308987 PRELID1Q9Y255 219 aa4.31□□□□□ -1.72
CKS1B-201ENST00000308987 NSG1A0A0A6YYJ2 146 aa4.3□□□□□ -1.72
CKS1B-201ENST00000308987 A0A0B4J203 849 aa4.3□□□□□ -1.72
CKS1B-201ENST00000308987 A0A0D9SG52 128 aa4.3□□□□□ -1.72
CKS1B-201ENST00000308987 A0A1B0GVC2 190 aa4.3□□□□□ -1.72
CKS1B-201ENST00000308987 OR5H15A6NDH6 313 aa4.3□□□□□ -1.72
CKS1B-201ENST00000308987 OR6C68A6NDL8 312 aa4.3□□□□□ -1.72
CKS1B-201ENST00000308987 GGT3PA6NGU5 568 aa4.3□□□□□ -1.72
CKS1B-201ENST00000308987 SERINC4A6NH21 518 aa4.3□□□□□ -1.72
CKS1B-201ENST00000308987 A6NIN4 97 aa4.3□□□□□ -1.72
CKS1B-201ENST00000308987 TMEM200CA6NKL6 621 aa4.3□□□□□ -1.72
CKS1B-201ENST00000308987 RFPL4AA6NLU0 287 aa4.3□□□□□ -1.72
CKS1B-201ENST00000308987 ANXA2P2A6NMY6 339 aa4.3□□□□□ -1.72
CKS1B-201ENST00000308987 OR4C45A6NMZ5 311 aa4.3□□□□□ -1.72
CKS1B-201ENST00000308987 F5H5P2 479 aa4.3□□□□□ -1.72
CKS1B-201ENST00000308987 RFPL4AL1F8VTS6 287 aa4.3□□□□□ -1.72
CKS1B-201ENST00000308987 H3BUI4 141 aa4.3□□□□□ -1.72
CKS1B-201ENST00000308987 TRIM77I1YAP6 450 aa4.3□□□□□ -1.72
CKS1B-201ENST00000308987 SLC17A2O00624 439 aa4.3□□□□□ -1.72
CKS1B-201ENST00000308987 OR10H2O60403 315 aa4.3□□□□□ -1.72
CKS1B-201ENST00000308987 CDC40O60508 579 aaKnown RBP eCLIP4.3□□□□□ -1.72
CKS1B-201ENST00000308987 SRPX2O60687 465 aaPredicted RBP4.3□□□□□ -1.72
CKS1B-201ENST00000308987 ZFPL1O95159 310 aa4.3□□□□□ -1.72
CKS1B-201ENST00000308987 CLDN14O95500 239 aa4.3□□□□□ -1.72
CKS1B-201ENST00000308987 CSTAP01040 98 aa4.3□□□□□ -1.72
CKS1B-201ENST00000308987 CD8AP01732 235 aa4.3□□□□□ -1.72
CKS1B-201ENST00000308987 ALDOBP05062 364 aa4.3□□□□□ -1.72
CKS1B-201ENST00000308987 GYPBP06028 91 aa4.3□□□□□ -1.72
CKS1B-201ENST00000308987 ANXA2P07355 339 aaKnown RBP4.3□□□□□ -1.72
CKS1B-201ENST00000308987 NMBP08949 121 aa4.3□□□□□ -1.72
CKS1B-201ENST00000308987 CT62P0C5K7 136 aa4.3□□□□□ -1.72
CKS1B-201ENST00000308987 UBBP0CG47 229 aa4.3□□□□□ -1.72
CKS1B-201ENST00000308987 UBCP0CG48 685 aaKnown RBP4.3□□□□□ -1.72
CKS1B-201ENST00000308987 AKAIN1P0CW23 69 aa4.3□□□□□ -1.72
CKS1B-201ENST00000308987 HKR1P10072 659 aa4.3□□□□□ -1.72
CKS1B-201ENST00000308987 SLC25A4P12235 298 aa4.3□□□□□ -1.72
CKS1B-201ENST00000308987 RNH1P13489 461 aaKnown RBP4.3□□□□□ -1.72
CKS1B-201ENST00000308987 MGMTP16455 207 aa4.3□□□□□ -1.72
CKS1B-201ENST00000308987 HLA-GP17693 338 aa4.3□□□□□ -1.72
CKS1B-201ENST00000308987 AGAP20933 346 aa4.3□□□□□ -1.72
CKS1B-201ENST00000308987 ENPP1P22413 925 aa4.3□□□□□ -1.72
CKS1B-201ENST00000308987 CDK2P24941 298 aa4.3□□□□□ -1.72
CKS1B-201ENST00000308987 MPZP25189 248 aa4.3□□□□□ -1.72
CKS1B-201ENST00000308987 SSTR2P30874 369 aa4.3□□□□□ -1.72
CKS1B-201ENST00000308987 PRSS3P35030 304 aa4.3□□□□□ -1.72
CKS1B-201ENST00000308987 RPL4P36578 427 aaKnown RBP4.3□□□□□ -1.72
CKS1B-201ENST00000308987 NAA10P41227 235 aaPredicted RBP4.3□□□□□ -1.72
CKS1B-201ENST00000308987 EMDP50402 254 aa4.3□□□□□ -1.72
CKS1B-201ENST00000308987 EMP2P54851 167 aa4.3□□□□□ -1.72
CKS1B-201ENST00000308987 RPS27AP62979 156 aaKnown RBP4.3□□□□□ -1.72
CKS1B-201ENST00000308987 UBA52P62987 128 aaKnown RBP4.3□□□□□ -1.72
CKS1B-201ENST00000308987 MAT1AQ00266 395 aaKnown RBP4.3□□□□□ -1.72
CKS1B-201ENST00000308987 LTBQ06643 244 aa4.3□□□□□ -1.72
CKS1B-201ENST00000308987 TFF3Q07654 80 aa4.3□□□□□ -1.72
CKS1B-201ENST00000308987 FGL1Q08830 312 aa4.3□□□□□ -1.72
CKS1B-201ENST00000308987 FUT7Q11130 342 aa4.3□□□□□ -1.72
CKS1B-201ENST00000308987 GK2Q14410 553 aaPredicted RBP4.3□□□□□ -1.72
CKS1B-201ENST00000308987 ZNF267Q14586 743 aaPredicted RBP4.3□□□□□ -1.72
CKS1B-201ENST00000308987 EXOSC7Q15024 291 aaKnown RBP4.3□□□□□ -1.72
CKS1B-201ENST00000308987 ZMYND11Q15326 602 aa4.3□□□□□ -1.72
CKS1B-201ENST00000308987 KLHL26Q53HC5 615 aa4.3□□□□□ -1.72
CKS1B-201ENST00000308987 ZNF766Q5HY98 468 aa4.3□□□□□ -1.72
CKS1B-201ENST00000308987 TMEM255AQ5JRV8 349 aa4.3□□□□□ -1.72
CKS1B-201ENST00000308987 HES5Q5TA89 166 aa4.3□□□□□ -1.72
CKS1B-201ENST00000308987 H3F3CQ6NXT2 135 aa4.3□□□□□ -1.72
CKS1B-201ENST00000308987 TFAP2EQ6VUC0 442 aa4.3□□□□□ -1.72
CKS1B-201ENST00000308987 TMUB2Q71RG4 321 aa4.3□□□□□ -1.72
CKS1B-201ENST00000308987 PRSS41Q7RTY9 318 aa4.3□□□□□ -1.72
CKS1B-201ENST00000308987 FAM122BQ7Z309 247 aa4.3□□□□□ -1.72
CKS1B-201ENST00000308987 JAZF1Q86VZ6 243 aa4.3□□□□□ -1.72
CKS1B-201ENST00000308987 DOLPP1Q86YN1 238 aa4.3□□□□□ -1.72
CKS1B-201ENST00000308987 PDZD9Q8IXQ8 264 aa4.3□□□□□ -1.72
CKS1B-201ENST00000308987 RPRMLQ8N4K4 120 aa4.3□□□□□ -1.72
CKS1B-201ENST00000308987 CSNK1A1LQ8N752 337 aa4.3□□□□□ -1.72
CKS1B-201ENST00000308987 ZNF433Q8N7K0 673 aaPredicted RBP4.3□□□□□ -1.72
CKS1B-201ENST00000308987 BOLLQ8N9W6 283 aaKnown RBP4.3□□□□□ -1.72
CKS1B-201ENST00000308987 LRRC75AQ8NAA5 344 aa4.3□□□□□ -1.72
CKS1B-201ENST00000308987 C9orf106Q8NAJ2 232 aa4.3□□□□□ -1.72
CKS1B-201ENST00000308987 TMEM229BQ8NBD8 167 aa4.3□□□□□ -1.72
CKS1B-201ENST00000308987 BEST4Q8NFU0 473 aa4.3□□□□□ -1.72
CKS1B-201ENST00000308987 OR2AK2Q8NG84 335 aa4.3□□□□□ -1.72
CKS1B-201ENST00000308987 OR52R1Q8NGF1 315 aa4.3□□□□□ -1.72
CKS1B-201ENST00000308987 OR5T2Q8NGG2 359 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms