RNA–Protein interactions for RNA: ENST00000305866.9

VPS50-202, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS50, Length 3,613 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-202ENST00000305866 RPP14O95059 124 aaKnown RBP4.78□□□□□ -1.64
VPS50-202ENST00000305866 FABP1P07148 127 aa4.78□□□□□ -1.64
VPS50-202ENST00000305866 WNT2P09544 360 aa4.78□□□□□ -1.64
VPS50-202ENST00000305866 DANCRP0C864 163 aa4.78□□□□□ -1.64
VPS50-202ENST00000305866 EN2P19622 333 aaPredicted RBP4.78□□□□□ -1.64
VPS50-202ENST00000305866 BCKDHBP21953 392 aa4.78□□□□□ -1.64
VPS50-202ENST00000305866 PTAFRP25105 342 aa4.78□□□□□ -1.64
VPS50-202ENST00000305866 CD34P28906 385 aa4.78□□□□□ -1.64
VPS50-202ENST00000305866 H3F3AP84243 136 aa4.78□□□□□ -1.64
VPS50-202ENST00000305866 SHBQ15464 509 aa4.78□□□□□ -1.64
VPS50-202ENST00000305866 HYAL4Q2M3T9 481 aa4.78□□□□□ -1.64
VPS50-202ENST00000305866 C10orf128Q5T292 105 aa4.78□□□□□ -1.64
VPS50-202ENST00000305866 SLC25A47Q6Q0C1 308 aa4.78□□□□□ -1.64
VPS50-202ENST00000305866 C1QL2Q7Z5L3 287 aa4.78□□□□□ -1.64
VPS50-202ENST00000305866 CENPVQ7Z7K6 275 aaPredicted RBP4.78□□□□□ -1.64
VPS50-202ENST00000305866 OR4K17Q8NGC6 315 aa4.78□□□□□ -1.64
VPS50-202ENST00000305866 MUCL1Q96DR8 90 aa4.78□□□□□ -1.64
VPS50-202ENST00000305866 RCC1LQ96I51 464 aaKnown RBP4.78□□□□□ -1.64
VPS50-202ENST00000305866 C18orf12Q96KH6 178 aa4.78□□□□□ -1.64
VPS50-202ENST00000305866 CHST5Q9GZS9 411 aa4.78□□□□□ -1.64
VPS50-202ENST00000305866 EXO5Q9H790 373 aa4.78□□□□□ -1.64
VPS50-202ENST00000305866 ZMAT3Q9HA38 289 aaKnown RBP4.78□□□□□ -1.64
VPS50-202ENST00000305866 RAB22AQ9UL26 194 aa4.78□□□□□ -1.64
VPS50-202ENST00000305866 U3KQA8 63 aa4.78□□□□□ -1.64
VPS50-202ENST00000305866 ASPMQ8IZT6 3477 aa4.78□□□□□ -1.64
VPS50-202ENST00000305866 IGHV1OR21-1A0A087WYE8 117 aa4.78□□□□□ -1.64
VPS50-202ENST00000305866 K7N7A8 449 aa4.78□□□□□ -1.64
VPS50-202ENST00000305866 FBXO45P0C2W1 286 aa4.78□□□□□ -1.64
VPS50-202ENST00000305866 RPL35P42766 123 aaKnown RBP4.78□□□□□ -1.64
VPS50-202ENST00000305866 FAM3AP98173 230 aa4.78□□□□□ -1.64
VPS50-202ENST00000305866 RBM39Q14498 530 aaKnown RBP4.78□□□□□ -1.64
VPS50-202ENST00000305866 SGCAQ16586 387 aa4.78□□□□□ -1.64
VPS50-202ENST00000305866 AVPI1Q5T686 147 aa4.78□□□□□ -1.64
VPS50-202ENST00000305866 C1orf140Q5VVS0 124 aa4.78□□□□□ -1.64
VPS50-202ENST00000305866 RHBDD2Q6NTF9 364 aa4.78□□□□□ -1.64
VPS50-202ENST00000305866 C7orf61Q8IZ16 206 aa4.78□□□□□ -1.64
VPS50-202ENST00000305866 Q8NFD4 153 aa4.78□□□□□ -1.64
VPS50-202ENST00000305866 OR8S1Q8NH09 359 aa4.78□□□□□ -1.64
VPS50-202ENST00000305866 FBXO17Q96EF6 278 aa4.78□□□□□ -1.64
VPS50-202ENST00000305866 KLHDC7BQ96G42 594 aa4.78□□□□□ -1.64
VPS50-202ENST00000305866 TMEM106CQ9BVX2 250 aa4.78□□□□□ -1.64
VPS50-202ENST00000305866 B3GALT5Q9Y2C3 310 aa4.78□□□□□ -1.64
VPS50-202ENST00000305866 OR10H1Q9Y4A9 318 aa4.78□□□□□ -1.64
VPS50-202ENST00000305866 LHFPL6Q9Y693 200 aa4.78□□□□□ -1.64
VPS50-202ENST00000305866 A0A1W2PP11 408 aa4.77□□□□□ -1.65
VPS50-202ENST00000305866 LIPT2A6NK58 231 aa4.77□□□□□ -1.65
VPS50-202ENST00000305866 NPIPA2E9PIF3 369 aa4.77□□□□□ -1.65
VPS50-202ENST00000305866 SOCS1O15524 211 aa4.77□□□□□ -1.65
VPS50-202ENST00000305866 AMY2AP04746 511 aa4.77□□□□□ -1.65
VPS50-202ENST00000305866 HOXB5P09067 269 aa4.77□□□□□ -1.65
VPS50-202ENST00000305866 SRFP11831 508 aa4.77□□□□□ -1.65
VPS50-202ENST00000305866 HPGDP15428 266 aa4.77□□□□□ -1.65
VPS50-202ENST00000305866 HOXA5P20719 270 aa4.77□□□□□ -1.65
VPS50-202ENST00000305866 DAP3P51398 398 aaKnown RBP4.77□□□□□ -1.65
VPS50-202ENST00000305866 RPS23P62266 143 aaKnown RBP4.77□□□□□ -1.65
VPS50-202ENST00000305866 ACKR1Q16570 336 aa4.77□□□□□ -1.65
VPS50-202ENST00000305866 SRSF7Q16629 238 aaKnown RBP eCLIP4.77□□□□□ -1.65
VPS50-202ENST00000305866 RPL7L1Q6DKI1 246 aaKnown RBP4.77□□□□□ -1.65
VPS50-202ENST00000305866 KCTD18Q6PI47 426 aaPredicted RBP4.77□□□□□ -1.65
VPS50-202ENST00000305866 UBAC2Q8NBM4 344 aa4.77□□□□□ -1.65
VPS50-202ENST00000305866 OR6K6Q8NGW6 343 aa4.77□□□□□ -1.65
VPS50-202ENST00000305866 TMED6Q8WW62 240 aa4.77□□□□□ -1.65
VPS50-202ENST00000305866 TMEM54Q969K7 222 aa4.77□□□□□ -1.65
VPS50-202ENST00000305866 MRGPRX4Q96LA9 322 aa4.77□□□□□ -1.65
VPS50-202ENST00000305866 ADAD1Q96M93 576 aaKnown RBP4.77□□□□□ -1.65
VPS50-202ENST00000305866 SYT3Q9BQG1 590 aa4.77□□□□□ -1.65
VPS50-202ENST00000305866 ASF1BQ9NVP2 202 aa4.77□□□□□ -1.65
VPS50-202ENST00000305866 ALKBH4Q9NXW9 302 aa4.77□□□□□ -1.65
VPS50-202ENST00000305866 GHRLQ9UBU3 117 aa4.77□□□□□ -1.65
VPS50-202ENST00000305866 LAMP5Q9UJQ1 280 aa4.77□□□□□ -1.65
VPS50-202ENST00000305866 V9GYS6 101 aa4.77□□□□□ -1.65
VPS50-202ENST00000305866 TMED7-TICAM2A0A0A6YYA0 188 aa4.77□□□□□ -1.65
VPS50-202ENST00000305866 LOC107986453A0A1B0GWG9 222 aa4.77□□□□□ -1.65
VPS50-202ENST00000305866 A0A1B0GX78 115 aa4.77□□□□□ -1.65
VPS50-202ENST00000305866 ZNF736B4DX44 427 aaPredicted RBP4.77□□□□□ -1.65
VPS50-202ENST00000305866 GNB5O14775 395 aa4.77□□□□□ -1.65
VPS50-202ENST00000305866 STK17BO94768 372 aa4.77□□□□□ -1.65
VPS50-202ENST00000305866 FARS2O95363 451 aaKnown RBP4.77□□□□□ -1.65
VPS50-202ENST00000305866 NUDT14O95848 222 aa4.77□□□□□ -1.65
VPS50-202ENST00000305866 CD63P08962 238 aa4.77□□□□□ -1.65
VPS50-202ENST00000305866 GNB3P16520 340 aa4.77□□□□□ -1.65
VPS50-202ENST00000305866 DEFA5Q01523 94 aa4.77□□□□□ -1.65
VPS50-202ENST00000305866 PDZK1IP1Q13113 114 aa4.77□□□□□ -1.65
VPS50-202ENST00000305866 SURF2Q15527 256 aaPredicted RBP4.77□□□□□ -1.65
VPS50-202ENST00000305866 TMEM128Q5BJH2 165 aa4.77□□□□□ -1.65
VPS50-202ENST00000305866 IGSF11Q5DX21 431 aa4.77□□□□□ -1.65
VPS50-202ENST00000305866 SLC35D2Q76EJ3 337 aa4.77□□□□□ -1.65
VPS50-202ENST00000305866 ZFP82Q8N141 532 aa4.77□□□□□ -1.65
VPS50-202ENST00000305866 OR1L3Q8NH93 324 aa4.77□□□□□ -1.65
VPS50-202ENST00000305866 NANPQ8TBE9 248 aa4.77□□□□□ -1.65
VPS50-202ENST00000305866 POC1BQ8TC44 478 aa4.77□□□□□ -1.65
VPS50-202ENST00000305866 MARCH1Q8TCQ1 289 aa4.77□□□□□ -1.65
VPS50-202ENST00000305866 RNF141Q8WVD5 230 aa4.77□□□□□ -1.65
VPS50-202ENST00000305866 DAZLQ92904 295 aaKnown RBP4.77□□□□□ -1.65
VPS50-202ENST00000305866 ATG5Q9H1Y0 275 aa4.77□□□□□ -1.65
VPS50-202ENST00000305866 UPB1Q9UBR1 384 aa4.77□□□□□ -1.65
VPS50-202ENST00000305866 MRPS18CQ9Y3D5 142 aaKnown RBP4.77□□□□□ -1.65
VPS50-202ENST00000305866 RFNGQ9Y644 331 aa4.77□□□□□ -1.65
VPS50-202ENST00000305866 TRBV23-1A0A0A0MS06 115 aa4.77□□□□□ -1.65
VPS50-202ENST00000305866 ZNF729A6NN14 1252 aaPredicted RBP4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms