RNA–Protein interactions for RNA: ENST00000304494.9

CDKN2A-201, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 1 (best) BASIC

Gene CDKN2A, Length 1,218 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-201ENST00000304494 CIB1Q99828 191 aa22.07■■□□□ 1.12
CDKN2A-201ENST00000304494 MICU1Q9BPX6 476 aa22.07■■□□□ 1.12
CDKN2A-201ENST00000304494 SEMA6AQ9H2E6 1030 aa22.07■■□□□ 1.12
CDKN2A-201ENST00000304494 RHBDD3Q9Y3P4 386 aa22.07■■□□□ 1.12
CDKN2A-201ENST00000304494 IGHV2-70DA0A0C4DH43 119 aa22.06■■□□□ 1.12
CDKN2A-201ENST00000304494 TMEM269A0A1B0GVZ9 245 aa22.06■■□□□ 1.12
CDKN2A-201ENST00000304494 OOEPA6NGQ2 149 aa22.06■■□□□ 1.12
CDKN2A-201ENST00000304494 EPHA2P29317 976 aa22.06■■□□□ 1.12
CDKN2A-201ENST00000304494 CD80P33681 288 aa22.06■■□□□ 1.12
CDKN2A-201ENST00000304494 HILS1P60008 231 aa22.06■■□□□ 1.12
CDKN2A-201ENST00000304494 PAX2Q02962 417 aa22.06■■□□□ 1.12
CDKN2A-201ENST00000304494 PAX8Q06710 450 aa22.06■■□□□ 1.12
CDKN2A-201ENST00000304494 AADACL4Q5VUY2 407 aa22.06■■□□□ 1.12
CDKN2A-201ENST00000304494 ZNF826PQ6ZT77 177 aa22.06■■□□□ 1.12
CDKN2A-201ENST00000304494 CCDC121Q6ZUS5 278 aa22.06■■□□□ 1.12
CDKN2A-201ENST00000304494 GID4Q8IVV7 300 aa22.06■■□□□ 1.12
CDKN2A-201ENST00000304494 ZNF679Q8IYX0 411 aa22.06■■□□□ 1.12
CDKN2A-201ENST00000304494 ITFG2Q969R8 447 aa22.06■■□□□ 1.12
CDKN2A-201ENST00000304494 OSBPL10Q9BXB5 764 aa22.06■■□□□ 1.12
CDKN2A-201ENST00000304494 RNPEPL1Q9HAU8 725 aa22.06■■□□□ 1.12
CDKN2A-201ENST00000304494 OAZ3Q9UMX2 235 aa22.06■■□□□ 1.12
CDKN2A-201ENST00000304494 C3orf80F5H4A9 247 aa22.05■■□□□ 1.12
CDKN2A-201ENST00000304494 M0R129 80 aa22.05■■□□□ 1.12
CDKN2A-201ENST00000304494 RGS9O75916 674 aaPredicted RBP22.05■■□□□ 1.12
CDKN2A-201ENST00000304494 CST4P01036 141 aa22.05■■□□□ 1.12
CDKN2A-201ENST00000304494 PPIAL4GP0DN37 164 aa22.05■■□□□ 1.12
CDKN2A-201ENST00000304494 WDR25Q64LD2 544 aaPredicted RBP22.05■■□□□ 1.12
CDKN2A-201ENST00000304494 GALNT4Q8N4A0 578 aa22.05■■□□□ 1.12
CDKN2A-201ENST00000304494 GCSAMQ8N6F7 178 aa22.05■■□□□ 1.12
CDKN2A-201ENST00000304494 OR1M1Q8NGA1 313 aa22.05■■□□□ 1.12
CDKN2A-201ENST00000304494 LYZL4Q96KX0 146 aa22.05■■□□□ 1.12
CDKN2A-201ENST00000304494 OR8B4Q96RC9 309 aa22.05■■□□□ 1.12
CDKN2A-201ENST00000304494 SLC6A7Q99884 636 aa22.05■■□□□ 1.12
CDKN2A-201ENST00000304494 RTL8AQ9BWD3 113 aa22.05■■□□□ 1.12
CDKN2A-201ENST00000304494 FAM206AQ9NX38 181 aa22.05■■□□□ 1.12
CDKN2A-201ENST00000304494 NUP50Q9UKX7 468 aa22.05■■□□□ 1.12
CDKN2A-201ENST00000304494 ARHGAP32A7KAX9 2087 aa22.05■■□□□ 1.12
CDKN2A-201ENST00000304494 A0A0U1RQV5 110 aa22.04■■□□□ 1.12
CDKN2A-201ENST00000304494 PSMD9O00233 223 aa22.04■■□□□ 1.12
CDKN2A-201ENST00000304494 LHBP01229 141 aa22.04■■□□□ 1.12
CDKN2A-201ENST00000304494 ZNF829Q3KNS6 432 aaPredicted RBP22.04■■□□□ 1.12
CDKN2A-201ENST00000304494 ZNF841Q6ZN19 808 aa22.04■■□□□ 1.12
CDKN2A-201ENST00000304494 BCDIN3DQ7Z5W3 292 aaKnown RBP22.04■■□□□ 1.12
CDKN2A-201ENST00000304494 WDR86Q86TI4 376 aa22.04■■□□□ 1.12
CDKN2A-201ENST00000304494 ITPKCQ96DU7 683 aa22.04■■□□□ 1.12
CDKN2A-201ENST00000304494 IL4I1Q96RQ9 567 aa22.04■■□□□ 1.12
CDKN2A-201ENST00000304494 ERVK-18Q9QC07 812 aa22.04■■□□□ 1.12
CDKN2A-201ENST00000304494 IKZF2Q9UKS7 526 aa22.04■■□□□ 1.12
CDKN2A-201ENST00000304494 COPS3Q9UNS2 423 aa22.04■■□□□ 1.12
CDKN2A-201ENST00000304494 STAB1Q9NY15 2570 aa22.04■■□□□ 1.12
CDKN2A-201ENST00000304494 WNK2Q9Y3S1 2297 aa22.03■■□□□ 1.12
CDKN2A-201ENST00000304494 ACKR3P25106 362 aa22.03■■□□□ 1.12
CDKN2A-201ENST00000304494 RIDAP52758 137 aaKnown RBP22.03■■□□□ 1.12
CDKN2A-201ENST00000304494 ACTR3P61158 418 aa22.03■■□□□ 1.12
CDKN2A-201ENST00000304494 HOXA4Q00056 320 aaPredicted RBP22.03■■□□□ 1.12
CDKN2A-201ENST00000304494 PRDX4Q13162 271 aa22.03■■□□□ 1.12
CDKN2A-201ENST00000304494 TEX36Q5VZQ5 186 aa22.03■■□□□ 1.12
CDKN2A-201ENST00000304494 CD276Q5ZPR3 534 aa22.03■■□□□ 1.12
CDKN2A-201ENST00000304494 SLC35F2Q8IXU6 374 aa22.03■■□□□ 1.12
CDKN2A-201ENST00000304494 FAM81AQ8TBF8 368 aa22.03■■□□□ 1.12
CDKN2A-201ENST00000304494 LRRC29Q8WV35 223 aa22.03■■□□□ 1.12
CDKN2A-201ENST00000304494 DACT3Q96B18 629 aaPredicted RBP22.03■■□□□ 1.12
CDKN2A-201ENST00000304494 TECTBQ96PL2 329 aa22.03■■□□□ 1.12
CDKN2A-201ENST00000304494 RBM4BQ9BQ04 359 aaKnown RBP22.03■■□□□ 1.12
CDKN2A-201ENST00000304494 GABARAPL3Q9BY60 117 aa22.03■■□□□ 1.12
CDKN2A-201ENST00000304494 ADGRL4Q9HBW9 690 aa22.03■■□□□ 1.12
CDKN2A-201ENST00000304494 HAO2Q9NYQ3 351 aa22.03■■□□□ 1.12
CDKN2A-201ENST00000304494 KIR2DS1A0A191URI9 304 aa22.02■■□□□ 1.12
CDKN2A-201ENST00000304494 TMEM210A6NLX4 147 aa22.02■■□□□ 1.12
CDKN2A-201ENST00000304494 ZNF850A8MQ14 1090 aa22.02■■□□□ 1.12
CDKN2A-201ENST00000304494 TRIM77I1YAP6 450 aa22.02■■□□□ 1.12
CDKN2A-201ENST00000304494 ADAM20O43506 726 aa22.02■■□□□ 1.12
CDKN2A-201ENST00000304494 MAP2K3P46734 347 aa22.02■■□□□ 1.12
CDKN2A-201ENST00000304494 COMMD2Q86X83 199 aa22.02■■□□□ 1.12
CDKN2A-201ENST00000304494 C11orf53Q8IXP5 236 aa22.02■■□□□ 1.12
CDKN2A-201ENST00000304494 PYDC1Q8WXC3 89 aa22.02■■□□□ 1.12
CDKN2A-201ENST00000304494 NUDT16L1Q9BRJ7 211 aaKnown RBP22.02■■□□□ 1.12
CDKN2A-201ENST00000304494 PBOV1Q9GZY1 135 aa22.02■■□□□ 1.12
CDKN2A-201ENST00000304494 TLNRD1Q9H1K6 362 aa22.02■■□□□ 1.12
CDKN2A-201ENST00000304494 RIBC2Q9H4K1 309 aa22.02■■□□□ 1.12
CDKN2A-201ENST00000304494 PPP1R3EQ9H7J1 279 aa22.02■■□□□ 1.12
CDKN2A-201ENST00000304494 SAC3D1A6NKF1 404 aa22.01■■□□□ 1.11
CDKN2A-201ENST00000304494 ZNF670-ZNF695F2Z2N8 137 aa22.01■■□□□ 1.11
CDKN2A-201ENST00000304494 TNFRSF13BO14836 293 aaPredicted RBP22.01■■□□□ 1.11
CDKN2A-201ENST00000304494 ENSAO43768 121 aaKnown RBP22.01■■□□□ 1.11
CDKN2A-201ENST00000304494 ATP6V1B1P15313 513 aa22.01■■□□□ 1.11
CDKN2A-201ENST00000304494 MUC1P15941 1255 aaPredicted RBP22.01■■□□□ 1.11
CDKN2A-201ENST00000304494 CFHR2P36980 270 aa22.01■■□□□ 1.11
CDKN2A-201ENST00000304494 CXCR4P61073 352 aa22.01■■□□□ 1.11
CDKN2A-201ENST00000304494 CSNK2BP67870 215 aa22.01■■□□□ 1.11
CDKN2A-201ENST00000304494 MICBQ29980 383 aa22.01■■□□□ 1.11
CDKN2A-201ENST00000304494 KLF17Q5JT82 389 aaPredicted RBP22.01■■□□□ 1.11
CDKN2A-201ENST00000304494 ZNF322Q6U7Q0 402 aaPredicted RBP22.01■■□□□ 1.11
CDKN2A-201ENST00000304494 WDR82Q6UXN9 313 aa22.01■■□□□ 1.11
CDKN2A-201ENST00000304494 FAM90A1Q86YD7 464 aa22.01■■□□□ 1.11
CDKN2A-201ENST00000304494 ZDHHC23Q8IYP9 409 aa22.01■■□□□ 1.11
CDKN2A-201ENST00000304494 C22orf15Q8WYQ4 148 aa22.01■■□□□ 1.11
CDKN2A-201ENST00000304494 OR5P3Q8WZ94 311 aa22.01■■□□□ 1.11
CDKN2A-201ENST00000304494 PIGCQ92535 297 aa22.01■■□□□ 1.11
CDKN2A-201ENST00000304494 HIST1H2AAQ96QV6 131 aa22.01■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms