RNA–Protein interactions for RNA: ENST00000302516.9

SF3B3-201, Transcript of splicing factor 3b subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B3, Length 9,720 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-201ENST00000302516 PARD6AQ9NPB6 346 aa6.91□□□□□ -1.3
SF3B3-201ENST00000302516 NXPH3O95157 252 aa6.91□□□□□ -1.3
SF3B3-201ENST00000302516 PRR35P0CG20 571 aa6.91□□□□□ -1.3
SF3B3-201ENST00000302516 SURF2Q15527 256 aaPredicted RBP6.91□□□□□ -1.3
SF3B3-201ENST00000302516 PYCR3Q53H96 274 aa6.91□□□□□ -1.3
SF3B3-201ENST00000302516 CPEB2Q7Z5Q1 589 aaKnown RBP6.91□□□□□ -1.3
SF3B3-201ENST00000302516 TMEM179BQ7Z7N9 219 aa6.91□□□□□ -1.3
SF3B3-201ENST00000302516 OSR2Q8N2R0 312 aa6.91□□□□□ -1.3
SF3B3-201ENST00000302516 TCTEX1D1Q8N7M0 179 aa6.91□□□□□ -1.3
SF3B3-201ENST00000302516 GPR32P1Q8NGA4 272 aa6.91□□□□□ -1.3
SF3B3-201ENST00000302516 OTOSQ8NHW6 89 aa6.91□□□□□ -1.3
SF3B3-201ENST00000302516 TTC9Q92623 222 aa6.91□□□□□ -1.3
SF3B3-201ENST00000302516 EDEM2Q9BV94 578 aa6.91□□□□□ -1.3
SF3B3-201ENST00000302516 TWSG1Q9GZX9 223 aa6.91□□□□□ -1.3
SF3B3-201ENST00000302516 ADGRL4Q9HBW9 690 aa6.91□□□□□ -1.3
SF3B3-201ENST00000302516 ZNF230Q9UIE0 474 aaPredicted RBP6.91□□□□□ -1.3
SF3B3-201ENST00000302516 DUS4LO95620 317 aaKnown RBP6.91□□□□□ -1.3
SF3B3-201ENST00000302516 IL13RA2Q14627 380 aa6.91□□□□□ -1.3
SF3B3-201ENST00000302516 FAM74A3Q4VXF1 159 aa6.91□□□□□ -1.3
SF3B3-201ENST00000302516 PRAMEF20Q5VT98 475 aa6.91□□□□□ -1.3
SF3B3-201ENST00000302516 ELSPBP1Q96BH3 223 aa6.91□□□□□ -1.3
SF3B3-201ENST00000302516 OCIAD1Q9NX40 245 aa6.91□□□□□ -1.3
SF3B3-201ENST00000302516 PYCARD-AS1I3L0S3 204 aa6.91□□□□□ -1.3
SF3B3-201ENST00000302516 AQP7O14520 342 aa6.91□□□□□ -1.3
SF3B3-201ENST00000302516 ICOSLGO75144 302 aa6.91□□□□□ -1.3
SF3B3-201ENST00000302516 COTL1Q14019 142 aa6.91□□□□□ -1.3
SF3B3-201ENST00000302516 GSG1Q2KHT4 349 aa6.91□□□□□ -1.3
SF3B3-201ENST00000302516 LINC00303Q3SY05 128 aa6.91□□□□□ -1.3
SF3B3-201ENST00000302516 DRAM2Q6UX65 266 aa6.91□□□□□ -1.3
SF3B3-201ENST00000302516 ARSGQ96EG1 525 aa6.91□□□□□ -1.3
SF3B3-201ENST00000302516 FGF21Q9NSA1 209 aa6.91□□□□□ -1.3
SF3B3-201ENST00000302516 PPP1R3CQ9UQK1 317 aa6.91□□□□□ -1.3
SF3B3-201ENST00000302516 ZNF320A2RRD8 509 aa6.9□□□□□ -1.3
SF3B3-201ENST00000302516 SPNP16150 400 aa6.9□□□□□ -1.3
SF3B3-201ENST00000302516 USF1P22415 310 aaPredicted RBP6.9□□□□□ -1.3
SF3B3-201ENST00000302516 GNG4P50150 75 aa6.9□□□□□ -1.3
SF3B3-201ENST00000302516 CCR5P51681 352 aa6.9□□□□□ -1.3
SF3B3-201ENST00000302516 GUK1Q16774 197 aa6.9□□□□□ -1.3
SF3B3-201ENST00000302516 LTC4SQ16873 150 aa6.9□□□□□ -1.3
SF3B3-201ENST00000302516 PAQR6Q6TCH4 344 aa6.9□□□□□ -1.3
SF3B3-201ENST00000302516 ZPBPQ9BS86 351 aa6.9□□□□□ -1.3
SF3B3-201ENST00000302516 BARX1Q9HBU1 254 aaPredicted RBP6.9□□□□□ -1.3
SF3B3-201ENST00000302516 NCBP2LA6PVI3 153 aaKnown RBP6.9□□□□□ -1.3
SF3B3-201ENST00000302516 FXYD1O00168 92 aa6.9□□□□□ -1.3
SF3B3-201ENST00000302516 CTDSPLO15194 276 aa6.9□□□□□ -1.3
SF3B3-201ENST00000302516 HPP00738 406 aa6.9□□□□□ -1.3
SF3B3-201ENST00000302516 OPN1LWP04000 364 aa6.9□□□□□ -1.3
SF3B3-201ENST00000302516 SMIM17P0DL12 118 aa6.9□□□□□ -1.3
SF3B3-201ENST00000302516 ZNF77Q15935 545 aa6.9□□□□□ -1.3
SF3B3-201ENST00000302516 LCN15Q6UWW0 184 aa6.9□□□□□ -1.3
SF3B3-201ENST00000302516 TOMM20LQ6UXN7 152 aa6.9□□□□□ -1.3
SF3B3-201ENST00000302516 LRRTM1Q86UE6 522 aa6.9□□□□□ -1.3
SF3B3-201ENST00000302516 APOBEC3DQ96AK3 386 aaPredicted RBP6.9□□□□□ -1.3
SF3B3-201ENST00000302516 POM121L2Q96KW2 1035 aa6.9□□□□□ -1.3
SF3B3-201ENST00000302516 ISG20L2Q9H9L3 353 aaKnown RBP6.9□□□□□ -1.3
SF3B3-201ENST00000302516 MARCH5Q9NX47 278 aa6.9□□□□□ -1.3
SF3B3-201ENST00000302516 ANK1P16157 1881 aa6.9□□□□□ -1.3
SF3B3-201ENST00000302516 SLC31A2O15432 143 aa6.9□□□□□ -1.3
SF3B3-201ENST00000302516 YIF1AO95070 293 aa6.9□□□□□ -1.3
SF3B3-201ENST00000302516 AMTP48728 403 aa6.9□□□□□ -1.3
SF3B3-201ENST00000302516 ZNF528Q3MIS6 628 aa6.9□□□□□ -1.3
SF3B3-201ENST00000302516 LINC01465Q8N7H1 131 aa6.9□□□□□ -1.3
SF3B3-201ENST00000302516 MTFP1Q9UDX5 166 aa6.9□□□□□ -1.3
SF3B3-201ENST00000302516 CCL26Q9Y258 94 aa6.9□□□□□ -1.3
SF3B3-201ENST00000302516 A0A0B4J2E0 115 aa6.9□□□□□ -1.3
SF3B3-201ENST00000302516 A0A1B0GX12 115 aa6.9□□□□□ -1.3
SF3B3-201ENST00000302516 CRYM-AS1A6NIL9 109 aa6.9□□□□□ -1.3
SF3B3-201ENST00000302516 CST2P09228 141 aa6.9□□□□□ -1.3
SF3B3-201ENST00000302516 MRM1Q6IN84 353 aaKnown RBP6.9□□□□□ -1.3
SF3B3-201ENST00000302516 NEURL2Q9BR09 285 aa6.9□□□□□ -1.3
SF3B3-201ENST00000302516 SIRT7Q9NRC8 400 aa6.9□□□□□ -1.3
SF3B3-201ENST00000302516 ST3GAL6Q9Y274 331 aa6.9□□□□□ -1.3
SF3B3-201ENST00000302516 MYOFQ9NZM1 2061 aa6.9□□□□□ -1.31
SF3B3-201ENST00000302516 A6NL46 340 aa6.9□□□□□ -1.31
SF3B3-201ENST00000302516 CLEC3BP05452 202 aa6.9□□□□□ -1.31
SF3B3-201ENST00000302516 CD1CP29017 333 aa6.9□□□□□ -1.31
SF3B3-201ENST00000302516 PTTG1IPP53801 180 aa6.9□□□□□ -1.31
SF3B3-201ENST00000302516 ZNF121P58317 390 aaPredicted RBP6.9□□□□□ -1.31
SF3B3-201ENST00000302516 KRTDAPP60985 99 aa6.9□□□□□ -1.31
SF3B3-201ENST00000302516 Q7L0L9 218 aa6.9□□□□□ -1.31
SF3B3-201ENST00000302516 SIRT6Q8N6T7 355 aa6.9□□□□□ -1.31
SF3B3-201ENST00000302516 UBAC2Q8NBM4 344 aa6.9□□□□□ -1.31
SF3B3-201ENST00000302516 OR13C5Q8NGS8 318 aa6.9□□□□□ -1.31
SF3B3-201ENST00000302516 TRAV20A0A0B4J274 112 aa6.9□□□□□ -1.31
SF3B3-201ENST00000302516 LRRC3CA6NJW4 275 aa6.9□□□□□ -1.31
SF3B3-201ENST00000302516 DBX1A6NMT0 343 aa6.9□□□□□ -1.31
SF3B3-201ENST00000302516 CIDEAO60543 219 aa6.9□□□□□ -1.31
SF3B3-201ENST00000302516 SLC2A10O95528 541 aa6.9□□□□□ -1.31
SF3B3-201ENST00000302516 FABP4P15090 132 aa6.9□□□□□ -1.31
SF3B3-201ENST00000302516 HLXQ14774 488 aaPredicted RBP6.9□□□□□ -1.31
SF3B3-201ENST00000302516 ATP6V1FQ16864 119 aa6.9□□□□□ -1.31
SF3B3-201ENST00000302516 OR6S1Q8NH40 331 aa6.9□□□□□ -1.31
SF3B3-201ENST00000302516 ZNF764Q96H86 408 aaPredicted RBP6.9□□□□□ -1.31
SF3B3-201ENST00000302516 SEC11CQ9BY50 192 aa6.9□□□□□ -1.31
SF3B3-201ENST00000302516 NARFLQ9H6Q4 476 aa6.9□□□□□ -1.31
SF3B3-201ENST00000302516 AAMDCQ9H7C9 122 aa6.9□□□□□ -1.31
SF3B3-201ENST00000302516 RFC3P40938 356 aa6.9□□□□□ -1.31
SF3B3-201ENST00000302516 CA13Q8N1Q1 262 aa6.9□□□□□ -1.31
SF3B3-201ENST00000302516 OR52N4Q8NGI2 321 aa6.9□□□□□ -1.31
SF3B3-201ENST00000302516 FAM173AQ9BQD7 235 aa6.9□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms