RNA–Protein interactions for RNA: ENST00000300862.7

HIF3A-204, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HIF3A, Length 2,551 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-204ENST00000300862 DUX4L4P0CJ87 422 aa11.37□□□□□ -0.59
HIF3A-204ENST00000300862 DUX4L5P0CJ88 424 aa11.37□□□□□ -0.59
HIF3A-204ENST00000300862 DUX4L6P0CJ89 424 aa11.37□□□□□ -0.59
HIF3A-204ENST00000300862 DUX4L7P0CJ90 424 aa11.37□□□□□ -0.59
HIF3A-204ENST00000300862 NPY4RP50391 375 aa11.37□□□□□ -0.59
HIF3A-204ENST00000300862 AKR1D1P51857 326 aa11.37□□□□□ -0.59
HIF3A-204ENST00000300862 MICBQ29980 383 aa11.37□□□□□ -0.59
HIF3A-204ENST00000300862 PHYHD1Q5SRE7 291 aa11.37□□□□□ -0.59
HIF3A-204ENST00000300862 C1QL2Q7Z5L3 287 aa11.37□□□□□ -0.59
HIF3A-204ENST00000300862 PUSL1Q8N0Z8 303 aaKnown RBP11.37□□□□□ -0.59
HIF3A-204ENST00000300862 LRRC18Q8N456 261 aa11.37□□□□□ -0.59
HIF3A-204ENST00000300862 KCNRGQ8N5I3 272 aa11.37□□□□□ -0.59
HIF3A-204ENST00000300862 TMEM185AQ8NFB2 350 aa11.37□□□□□ -0.59
HIF3A-204ENST00000300862 OR6X1Q8NH79 312 aa11.37□□□□□ -0.59
HIF3A-204ENST00000300862 ASB13Q8WXK3 278 aa11.37□□□□□ -0.59
HIF3A-204ENST00000300862 MAFIPQ8WZ33 124 aa11.37□□□□□ -0.59
HIF3A-204ENST00000300862 RAB3CQ96E17 227 aa11.37□□□□□ -0.59
HIF3A-204ENST00000300862 SHDQ96IW2 340 aa11.37□□□□□ -0.59
HIF3A-204ENST00000300862 JSRP1Q96MG2 331 aaPredicted RBP11.37□□□□□ -0.59
HIF3A-204ENST00000300862 DUX4Q9UBX2 424 aa11.37□□□□□ -0.59
HIF3A-204ENST00000300862 NDRG3Q9UGV2 375 aa11.37□□□□□ -0.59
HIF3A-204ENST00000300862 GPN3Q9UHW5 284 aaPredicted RBP11.37□□□□□ -0.59
HIF3A-204ENST00000300862 ZNF107Q9UII5 783 aaPredicted RBP11.37□□□□□ -0.59
HIF3A-204ENST00000300862 ADAMTS9Q9P2N4 1935 aa11.37□□□□□ -0.59
HIF3A-204ENST00000300862 IGLV3-32A0A0A0MS00 114 aa11.37□□□□□ -0.59
HIF3A-204ENST00000300862 CDC14BO60729 498 aa11.37□□□□□ -0.59
HIF3A-204ENST00000300862 ADCYAP1P18509 176 aa11.37□□□□□ -0.59
HIF3A-204ENST00000300862 DLSTP36957 453 aa11.37□□□□□ -0.59
HIF3A-204ENST00000300862 HOXA1P49639 335 aaPredicted RBP11.37□□□□□ -0.59
HIF3A-204ENST00000300862 TMEM50BP56557 158 aa11.37□□□□□ -0.59
HIF3A-204ENST00000300862 PPIAP62937 165 aaKnown RBP11.37□□□□□ -0.59
HIF3A-204ENST00000300862 MITD1Q8WV92 249 aa11.37□□□□□ -0.59
HIF3A-204ENST00000300862 EDAQ92838 391 aa11.37□□□□□ -0.59
HIF3A-204ENST00000300862 ARHGAP5-AS1Q96IT6 56 aa11.37□□□□□ -0.59
HIF3A-204ENST00000300862 ADAT1Q9BUB4 502 aaKnown RBP11.37□□□□□ -0.59
HIF3A-204ENST00000300862 ZNF471Q9BX82 626 aaPredicted RBP11.37□□□□□ -0.59
HIF3A-204ENST00000300862 FAM117AQ9C073 453 aa11.37□□□□□ -0.59
HIF3A-204ENST00000300862 ESRP2Q9H6T0 727 aaKnown RBP11.37□□□□□ -0.59
HIF3A-204ENST00000300862 WNT16Q9UBV4 365 aa11.37□□□□□ -0.59
HIF3A-204ENST00000300862 TNFSF18Q9UNG2 199 aa11.37□□□□□ -0.59
HIF3A-204ENST00000300862 A0A0D9SG52 128 aa11.36□□□□□ -0.59
HIF3A-204ENST00000300862 RNF222A6NCQ9 220 aa11.36□□□□□ -0.59
HIF3A-204ENST00000300862 C5orf51A6NDU8 294 aa11.36□□□□□ -0.59
HIF3A-204ENST00000300862 SLC6A9P48067 706 aa11.36□□□□□ -0.59
HIF3A-204ENST00000300862 STARP49675 285 aa11.36□□□□□ -0.59
HIF3A-204ENST00000300862 GUCA2BQ16661 112 aa11.36□□□□□ -0.59
HIF3A-204ENST00000300862 LYSMD4Q5XG99 296 aa11.36□□□□□ -0.59
HIF3A-204ENST00000300862 TMPPEQ6ZT21 453 aa11.36□□□□□ -0.59
HIF3A-204ENST00000300862 LDLRAD3Q86YD5 345 aa11.36□□□□□ -0.59
HIF3A-204ENST00000300862 SVIPQ8NHG7 77 aa11.36□□□□□ -0.59
HIF3A-204ENST00000300862 SAP25Q8TEE9 199 aa11.36□□□□□ -0.59
HIF3A-204ENST00000300862 ROBO4Q8WZ75 1007 aa11.36□□□□□ -0.59
HIF3A-204ENST00000300862 UCN2Q96RP3 112 aa11.36□□□□□ -0.59
HIF3A-204ENST00000300862 C12orf57Q99622 126 aa11.36□□□□□ -0.59
HIF3A-204ENST00000300862 PHB2Q99623 299 aa11.36□□□□□ -0.59
HIF3A-204ENST00000300862 TMEM59Q9BXS4 323 aa11.36□□□□□ -0.59
HIF3A-204ENST00000300862 SLC39A1Q9NY26 324 aa11.36□□□□□ -0.59
HIF3A-204ENST00000300862 B3GALT1Q9Y5Z6 326 aa11.36□□□□□ -0.59
HIF3A-204ENST00000300862 KANTRA0A1W2PQU2 76 aa11.36□□□□□ -0.59
HIF3A-204ENST00000300862 H7C2Y5 167 aa11.36□□□□□ -0.59
HIF3A-204ENST00000300862 BCL2L11O43521 198 aa11.36□□□□□ -0.59
HIF3A-204ENST00000300862 DKK1O94907 266 aa11.36□□□□□ -0.59
HIF3A-204ENST00000300862 AGTR1P30556 359 aa11.36□□□□□ -0.59
HIF3A-204ENST00000300862 AKR1C2P52895 323 aa11.36□□□□□ -0.59
HIF3A-204ENST00000300862 AKR1C1Q04828 323 aa11.36□□□□□ -0.59
HIF3A-204ENST00000300862 HLA-BQ31612 363 aa11.36□□□□□ -0.59
HIF3A-204ENST00000300862 ARMC10Q8N2F6 343 aa11.36□□□□□ -0.59
HIF3A-204ENST00000300862 OR1S2Q8NGQ3 325 aa11.36□□□□□ -0.59
HIF3A-204ENST00000300862 ZNF385AQ96PM9 386 aaKnown RBP11.36□□□□□ -0.59
HIF3A-204ENST00000300862 IFT22Q9H7X7 185 aa11.36□□□□□ -0.59
HIF3A-204ENST00000300862 MBD2Q9UBB5 411 aa11.36□□□□□ -0.59
HIF3A-204ENST00000300862 OR5H15A6NDH6 313 aa11.35□□□□□ -0.59
HIF3A-204ENST00000300862 AQP7P3A6NL99 342 aa11.35□□□□□ -0.59
HIF3A-204ENST00000300862 LINC01387J3KSC0 135 aa11.35□□□□□ -0.59
HIF3A-204ENST00000300862 IL2RAP01589 272 aa11.35□□□□□ -0.59
HIF3A-204ENST00000300862 HAAOP46952 286 aa11.35□□□□□ -0.59
HIF3A-204ENST00000300862 ZNF345Q14585 488 aa11.35□□□□□ -0.59
HIF3A-204ENST00000300862 SLC9A3R2Q15599 337 aa11.35□□□□□ -0.59
HIF3A-204ENST00000300862 UNQ6126/PRO20091Q6UXV3 157 aa11.35□□□□□ -0.59
HIF3A-204ENST00000300862 CBLN2Q8IUK8 224 aa11.35□□□□□ -0.59
HIF3A-204ENST00000300862 ZDHHC22Q8N966 263 aa11.35□□□□□ -0.59
HIF3A-204ENST00000300862 LYZL4Q96KX0 146 aa11.35□□□□□ -0.59
HIF3A-204ENST00000300862 TSNAXQ99598 290 aaKnown RBP11.35□□□□□ -0.59
HIF3A-204ENST00000300862 ST6GALNAC5Q9BVH7 336 aa11.35□□□□□ -0.59
HIF3A-204ENST00000300862 DUSP23Q9BVJ7 150 aa11.35□□□□□ -0.59
HIF3A-204ENST00000300862 MLXQ9UH92 298 aa11.35□□□□□ -0.59
HIF3A-204ENST00000300862 PCDHB10Q9UN67 800 aa11.35□□□□□ -0.59
HIF3A-204ENST00000300862 CCDC85CA6NKD9 419 aa11.35□□□□□ -0.59
HIF3A-204ENST00000300862 SDCBPO00560 298 aaPredicted RBP11.35□□□□□ -0.59
HIF3A-204ENST00000300862 HTR3BO95264 441 aa11.35□□□□□ -0.59
HIF3A-204ENST00000300862 DBHP09172 617 aa11.35□□□□□ -0.59
HIF3A-204ENST00000300862 CCL3P10147 92 aa11.35□□□□□ -0.59
HIF3A-204ENST00000300862 HIST1H1DP16402 221 aaKnown RBP11.35□□□□□ -0.59
HIF3A-204ENST00000300862 SERPINF1P36955 418 aa11.35□□□□□ -0.59
HIF3A-204ENST00000300862 PRSS12P56730 875 aa11.35□□□□□ -0.59
HIF3A-204ENST00000300862 ARFRP1Q13795 201 aa11.35□□□□□ -0.59
HIF3A-204ENST00000300862 PCOLCEQ15113 449 aa11.35□□□□□ -0.59
HIF3A-204ENST00000300862 RAET1LQ5VY80 246 aa11.35□□□□□ -0.59
HIF3A-204ENST00000300862 MRPL14Q6P1L8 145 aaKnown RBP11.35□□□□□ -0.59
HIF3A-204ENST00000300862 FADS6Q8N9I5 356 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms