RNA–Protein interactions for RNA: ENST00000299957.10

CASC4-201, Transcript of cancer susceptibility 4, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CASC4, Length 3,962 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-201ENST00000299957 RSRP1Q9BUV0 290 aa11.86□□□□□ -0.51
CASC4-201ENST00000299957 RHOFQ9HBH0 211 aa11.86□□□□□ -0.51
CASC4-201ENST00000299957 LRFN1Q9P244 771 aa11.86□□□□□ -0.51
CASC4-201ENST00000299957 ARPC4-TTLL3A0A0A6YYG9 625 aa11.86□□□□□ -0.51
CASC4-201ENST00000299957 NSG1A0A0A6YYJ2 146 aa11.86□□□□□ -0.51
CASC4-201ENST00000299957 FRG2CA6NGY1 282 aa11.86□□□□□ -0.51
CASC4-201ENST00000299957 RHEBQ15382 184 aa11.86□□□□□ -0.51
CASC4-201ENST00000299957 OR2B11Q5JQS5 317 aa11.86□□□□□ -0.51
CASC4-201ENST00000299957 LINC01590Q5TEZ4 76 aa11.86□□□□□ -0.51
CASC4-201ENST00000299957 SLC22A25Q6T423 547 aa11.86□□□□□ -0.51
CASC4-201ENST00000299957 MRPL21Q7Z2W9 205 aaKnown RBP11.86□□□□□ -0.51
CASC4-201ENST00000299957 OR52H1Q8NGJ2 320 aa11.86□□□□□ -0.51
CASC4-201ENST00000299957 EXOSC3Q9NQT5 275 aaKnown RBP11.86□□□□□ -0.51
CASC4-201ENST00000299957 PADI1Q9ULC6 663 aa11.86□□□□□ -0.51
CASC4-201ENST00000299957 SRPK3Q9UPE1 567 aa11.86□□□□□ -0.51
CASC4-201ENST00000299957 RALGAPA1Q6GYQ0 2036 aa11.86□□□□□ -0.51
CASC4-201ENST00000299957 IGKV1D-42A0A075B6H8 117 aa11.86□□□□□ -0.51
CASC4-201ENST00000299957 A0A1W2PR80 420 aa11.86□□□□□ -0.51
CASC4-201ENST00000299957 M0R135 149 aa11.86□□□□□ -0.51
CASC4-201ENST00000299957 HS3ST1O14792 307 aa11.86□□□□□ -0.51
CASC4-201ENST00000299957 IFNA5P01569 189 aa11.86□□□□□ -0.51
CASC4-201ENST00000299957 ID4P47928 161 aa11.86□□□□□ -0.51
CASC4-201ENST00000299957 TAS2R46P59540 309 aa11.86□□□□□ -0.51
CASC4-201ENST00000299957 LINC00696Q6ZRV3 163 aa11.86□□□□□ -0.51
CASC4-201ENST00000299957 ZNF799Q96GE5 643 aa11.86□□□□□ -0.51
CASC4-201ENST00000299957 GPHA2Q96T91 129 aa11.86□□□□□ -0.51
CASC4-201ENST00000299957 METTL9Q9H1A3 318 aa11.86□□□□□ -0.51
CASC4-201ENST00000299957 SLC25A32Q9H2D1 315 aa11.86□□□□□ -0.51
CASC4-201ENST00000299957 SCPEP1Q9HB40 452 aa11.86□□□□□ -0.51
CASC4-201ENST00000299957 C1orf123Q9NWV4 160 aa11.86□□□□□ -0.51
CASC4-201ENST00000299957 ZFP92A6NM28 416 aa11.86□□□□□ -0.51
CASC4-201ENST00000299957 RAB27BO00194 218 aa11.86□□□□□ -0.51
CASC4-201ENST00000299957 PLPP3O14495 311 aa11.86□□□□□ -0.51
CASC4-201ENST00000299957 HSD17B6O14756 317 aa11.86□□□□□ -0.51
CASC4-201ENST00000299957 GSTZ1O43708 216 aaPredicted RBP11.86□□□□□ -0.51
CASC4-201ENST00000299957 SNAPC5O75971 98 aa11.86□□□□□ -0.51
CASC4-201ENST00000299957 PIGPP57054 158 aa11.86□□□□□ -0.51
CASC4-201ENST00000299957 SNRPEP62304 92 aaKnown RBP11.86□□□□□ -0.51
CASC4-201ENST00000299957 SLC16A13Q7RTY0 426 aa11.86□□□□□ -0.51
CASC4-201ENST00000299957 LILRB2Q8N423 598 aa11.86□□□□□ -0.51
CASC4-201ENST00000299957 ZFP62Q8NB50 900 aaPredicted RBP11.86□□□□□ -0.51
CASC4-201ENST00000299957 OR1N1Q8NGS0 311 aa11.86□□□□□ -0.51
CASC4-201ENST00000299957 SOX7Q9BT81 388 aa11.86□□□□□ -0.51
CASC4-201ENST00000299957 PBDC1Q9BVG4 233 aa11.86□□□□□ -0.51
CASC4-201ENST00000299957 FANCFQ9NPI8 374 aa11.86□□□□□ -0.51
CASC4-201ENST00000299957 VSIG4Q9Y279 399 aa11.86□□□□□ -0.51
CASC4-201ENST00000299957 AMDHD2Q9Y303 409 aa11.86□□□□□ -0.51
CASC4-201ENST00000299957 CADP27708 2225 aa11.85□□□□□ -0.51
CASC4-201ENST00000299957 EPOPA6NHQ4 379 aa11.85□□□□□ -0.51
CASC4-201ENST00000299957 CCL2P13500 99 aa11.85□□□□□ -0.51
CASC4-201ENST00000299957 RCC1P18754 421 aaPredicted RBP11.85□□□□□ -0.51
CASC4-201ENST00000299957 NDUFA6P56556 154 aa11.85□□□□□ -0.51
CASC4-201ENST00000299957 SHEQ5VZ18 495 aa11.85□□□□□ -0.51
CASC4-201ENST00000299957 MRGPREQ86SM8 312 aa11.85□□□□□ -0.51
CASC4-201ENST00000299957 TMEM229BQ8NBD8 167 aa11.85□□□□□ -0.51
CASC4-201ENST00000299957 PLPPR2Q96GM1 343 aa11.85□□□□□ -0.51
CASC4-201ENST00000299957 LUZP4Q9P127 313 aa11.85□□□□□ -0.51
CASC4-201ENST00000299957 KLK13Q9UKR3 277 aa11.85□□□□□ -0.51
CASC4-201ENST00000299957 PLSCR5A0PG75 271 aa11.85□□□□□ -0.51
CASC4-201ENST00000299957 TRIM77I1YAP6 450 aa11.85□□□□□ -0.51
CASC4-201ENST00000299957 SOX15O60248 233 aa11.85□□□□□ -0.51
CASC4-201ENST00000299957 IFNA2P01563 188 aa11.85□□□□□ -0.51
CASC4-201ENST00000299957 ARG1P05089 322 aa11.85□□□□□ -0.51
CASC4-201ENST00000299957 CHRM2P08172 466 aa11.85□□□□□ -0.51
CASC4-201ENST00000299957 FCARP24071 287 aa11.85□□□□□ -0.51
CASC4-201ENST00000299957 CXCL12P48061 93 aa11.85□□□□□ -0.51
CASC4-201ENST00000299957 KCNJ3P48549 501 aa11.85□□□□□ -0.51
CASC4-201ENST00000299957 TESK1Q15569 626 aa11.85□□□□□ -0.51
CASC4-201ENST00000299957 ZNF813Q6ZN06 617 aa11.85□□□□□ -0.51
CASC4-201ENST00000299957 NAA40Q86UY6 237 aa11.85□□□□□ -0.51
CASC4-201ENST00000299957 OR5M8Q8NGP6 311 aa11.85□□□□□ -0.51
CASC4-201ENST00000299957 HGDQ93099 445 aa11.85□□□□□ -0.51
CASC4-201ENST00000299957 TM4SF19Q96DZ7 209 aa11.85□□□□□ -0.51
CASC4-201ENST00000299957 FAM212BQ9NTI7 297 aaPredicted RBP11.85□□□□□ -0.51
CASC4-201ENST00000299957 ICAM5Q9UMF0 924 aa11.85□□□□□ -0.51
CASC4-201ENST00000299957 FLVCR1Q9Y5Y0 555 aa11.85□□□□□ -0.51
CASC4-201ENST00000299957 NAXDQ8IW45 347 aa11.85□□□□□ -0.51
CASC4-201ENST00000299957 C9orf40Q8IXQ3 194 aa11.85□□□□□ -0.51
CASC4-201ENST00000299957 OR5AS1Q8N127 324 aa11.85□□□□□ -0.51
CASC4-201ENST00000299957 TTLL8A6PVC2 850 aa11.84□□□□□ -0.51
CASC4-201ENST00000299957 EIF3GO75821 320 aaKnown RBP eCLIP11.84□□□□□ -0.51
CASC4-201ENST00000299957 ONECUT2O95948 504 aa11.84□□□□□ -0.51
CASC4-201ENST00000299957 ALDH3B1P43353 468 aa11.84□□□□□ -0.51
CASC4-201ENST00000299957 AFF3P51826 1226 aaKnown RBP11.84□□□□□ -0.51
CASC4-201ENST00000299957 EFNA3P52797 238 aa11.84□□□□□ -0.51
CASC4-201ENST00000299957 UBE2KP61086 200 aa11.84□□□□□ -0.51
CASC4-201ENST00000299957 ZNF485Q8NCK3 441 aa11.84□□□□□ -0.51
CASC4-201ENST00000299957 TCEAL3Q969E4 200 aa11.84□□□□□ -0.51
CASC4-201ENST00000299957 ZNF275Q9NSD4 429 aaPredicted RBP11.84□□□□□ -0.51
CASC4-201ENST00000299957 KCNK7Q9Y2U2 307 aa11.84□□□□□ -0.51
CASC4-201ENST00000299957 H7C1Q1 480 aa11.84□□□□□ -0.51
CASC4-201ENST00000299957 VSIG8P0DPA2 414 aa11.84□□□□□ -0.51
CASC4-201ENST00000299957 NQO2P16083 231 aa11.84□□□□□ -0.51
CASC4-201ENST00000299957 PNLIPRP2P54317 469 aa11.84□□□□□ -0.51
CASC4-201ENST00000299957 EGR4Q05215 589 aa11.84□□□□□ -0.51
CASC4-201ENST00000299957 KISS1Q15726 138 aa11.84□□□□□ -0.51
CASC4-201ENST00000299957 TMEM128Q5BJH2 165 aa11.84□□□□□ -0.51
CASC4-201ENST00000299957 IL22RA1Q8N6P7 574 aa11.84□□□□□ -0.51
CASC4-201ENST00000299957 CLEC1AQ8NC01 280 aa11.84□□□□□ -0.51
CASC4-201ENST00000299957 CCDC54Q8NEL0 328 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms