RNA–Protein interactions for RNA: ENST00000299333.7

SCN3B-201, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 5,665 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-201ENST00000299333 MASP2O00187 686 aa13.44□□□□□ -0.26
SCN3B-201ENST00000299333 ZNF195O14628 629 aa13.44□□□□□ -0.26
SCN3B-201ENST00000299333 MUC20Q8N307 709 aaPredicted RBP13.44□□□□□ -0.26
SCN3B-201ENST00000299333 GPR137Q96N19 417 aa13.44□□□□□ -0.26
SCN3B-201ENST00000299333 CHST6Q9GZX3 395 aa13.44□□□□□ -0.26
SCN3B-201ENST00000299333 PAM16Q9Y3D7 125 aa13.44□□□□□ -0.26
SCN3B-201ENST00000299333 CITO14578 2027 aa13.43□□□□□ -0.26
SCN3B-201ENST00000299333 TRAV1-2A0A0B4J238 106 aa13.43□□□□□ -0.26
SCN3B-201ENST00000299333 DRD1P21728 446 aa13.43□□□□□ -0.26
SCN3B-201ENST00000299333 RPL18Q07020 188 aaKnown RBP13.43□□□□□ -0.26
SCN3B-201ENST00000299333 EMC4Q5J8M3 183 aa13.43□□□□□ -0.26
SCN3B-201ENST00000299333 FAM78BQ5VT40 261 aa13.43□□□□□ -0.26
SCN3B-201ENST00000299333 PAQR9Q6ZVX9 377 aa13.43□□□□□ -0.26
SCN3B-201ENST00000299333 ARHGEF39Q8N4T4 335 aa13.43□□□□□ -0.26
SCN3B-201ENST00000299333 ARRDC3Q96B67 414 aa13.43□□□□□ -0.26
SCN3B-201ENST00000299333 UTP23Q9BRU9 249 aaKnown RBP13.43□□□□□ -0.26
SCN3B-201ENST00000299333 TRBV23-1A0A0A0MS06 115 aa13.43□□□□□ -0.26
SCN3B-201ENST00000299333 RHBDL1O75783 438 aa13.43□□□□□ -0.26
SCN3B-201ENST00000299333 TBXA2RP21731 343 aa13.43□□□□□ -0.26
SCN3B-201ENST00000299333 MEOX1P50221 254 aa13.43□□□□□ -0.26
SCN3B-201ENST00000299333 SLCO1C1Q9NYB5 712 aa13.43□□□□□ -0.26
SCN3B-201ENST00000299333 LNP1A1A4G5 178 aa13.43□□□□□ -0.26
SCN3B-201ENST00000299333 LRRC30A6NM36 301 aa13.43□□□□□ -0.26
SCN3B-201ENST00000299333 M0R135 149 aa13.43□□□□□ -0.26
SCN3B-201ENST00000299333 SLC37A1P57057 533 aa13.43□□□□□ -0.26
SCN3B-201ENST00000299333 PLA1AQ53H76 456 aa13.43□□□□□ -0.26
SCN3B-201ENST00000299333 MANEAQ5SRI9 462 aa13.43□□□□□ -0.26
SCN3B-201ENST00000299333 NKAIN2Q5VXU1 208 aa13.43□□□□□ -0.26
SCN3B-201ENST00000299333 DPPA3Q6W0C5 159 aa13.43□□□□□ -0.26
SCN3B-201ENST00000299333 ARIH2OSQ8N7S6 290 aa13.43□□□□□ -0.26
SCN3B-201ENST00000299333 LINC00469Q8N7U9 141 aa13.43□□□□□ -0.26
SCN3B-201ENST00000299333 ZNF799Q96GE5 643 aa13.43□□□□□ -0.26
SCN3B-201ENST00000299333 EPHX3Q9H6B9 360 aa13.43□□□□□ -0.26
SCN3B-201ENST00000299333 CD99P14209 185 aa13.43□□□□□ -0.26
SCN3B-201ENST00000299333 OR10X1Q8NGY0 326 aa13.43□□□□□ -0.26
SCN3B-201ENST00000299333 TNFRSF12AQ9NP84 129 aa13.43□□□□□ -0.26
SCN3B-201ENST00000299333 HEXAP06865 529 aa13.42□□□□□ -0.26
SCN3B-201ENST00000299333 OR10J1P30954 320 aa13.42□□□□□ -0.26
SCN3B-201ENST00000299333 PRRX1P54821 245 aa13.42□□□□□ -0.26
SCN3B-201ENST00000299333 OR10C1Q96KK4 312 aa13.42□□□□□ -0.26
SCN3B-201ENST00000299333 FCMRO60667 390 aa13.42□□□□□ -0.26
SCN3B-201ENST00000299333 ZNF865P0CJ78 1059 aaPredicted RBP13.42□□□□□ -0.26
SCN3B-201ENST00000299333 ATP6V1FQ16864 119 aa13.42□□□□□ -0.26
SCN3B-201ENST00000299333 DND1Q8IYX4 353 aaKnown RBP13.42□□□□□ -0.26
SCN3B-201ENST00000299333 PRSS3P2Q8NHM4 247 aa13.42□□□□□ -0.26
SCN3B-201ENST00000299333 CITED1Q99966 193 aa13.42□□□□□ -0.26
SCN3B-201ENST00000299333 FKBP11Q9NYL4 201 aa13.42□□□□□ -0.26
SCN3B-201ENST00000299333 ARID1BQ8NFD5 2236 aaPredicted RBP13.42□□□□□ -0.26
SCN3B-201ENST00000299333 CICQ96RK0 1608 aaPredicted RBP13.42□□□□□ -0.26
SCN3B-201ENST00000299333 EIF4E2O60573 245 aaKnown RBP13.42□□□□□ -0.26
SCN3B-201ENST00000299333 DAOP14920 347 aa13.42□□□□□ -0.26
SCN3B-201ENST00000299333 ZNF250P15622 560 aa13.42□□□□□ -0.26
SCN3B-201ENST00000299333 PPP2CBP62714 309 aa13.42□□□□□ -0.26
SCN3B-201ENST00000299333 DCDP81605 110 aaKnown RBP13.42□□□□□ -0.26
SCN3B-201ENST00000299333 AWAT1Q58HT5 328 aa13.42□□□□□ -0.26
SCN3B-201ENST00000299333 SEZ6L2Q6UXD5 910 aa13.42□□□□□ -0.26
SCN3B-201ENST00000299333 SIRT6Q8N6T7 355 aa13.42□□□□□ -0.26
SCN3B-201ENST00000299333 KLHDC9Q8NEP7 349 aa13.42□□□□□ -0.26
SCN3B-201ENST00000299333 LHFPL5Q8TAF8 219 aa13.42□□□□□ -0.26
SCN3B-201ENST00000299333 OR6C1Q96RD1 312 aa13.42□□□□□ -0.26
SCN3B-201ENST00000299333 IL21Q9HBE4 155 aa13.42□□□□□ -0.26
SCN3B-201ENST00000299333 TOPAZ1Q8N9V7 1692 aa13.42□□□□□ -0.26
SCN3B-201ENST00000299333 BAZ2AQ9UIF9 1905 aaKnown RBP13.42□□□□□ -0.26
SCN3B-201ENST00000299333 TMEM202A6NGA9 273 aa13.42□□□□□ -0.26
SCN3B-201ENST00000299333 FBP1P09467 338 aa13.42□□□□□ -0.26
SCN3B-201ENST00000299333 ICAM2P13598 275 aa13.42□□□□□ -0.26
SCN3B-201ENST00000299333 APOBEC1P41238 236 aaKnown RBP13.42□□□□□ -0.26
SCN3B-201ENST00000299333 GSG1Q2KHT4 349 aa13.42□□□□□ -0.26
SCN3B-201ENST00000299333 XAF1Q6GPH4 301 aa13.42□□□□□ -0.26
SCN3B-201ENST00000299333 TMEM251Q8N6I4 163 aa13.42□□□□□ -0.26
SCN3B-201ENST00000299333 ACY3Q96HD9 319 aa13.42□□□□□ -0.26
SCN3B-201ENST00000299333 C1QTNF6Q9BXI9 259 aa13.42□□□□□ -0.26
SCN3B-201ENST00000299333 HDAC8Q9BY41 377 aa13.42□□□□□ -0.26
SCN3B-201ENST00000299333 ST3GAL6Q9Y274 331 aa13.42□□□□□ -0.26
SCN3B-201ENST00000299333 ASB1Q9Y576 335 aa13.42□□□□□ -0.26
SCN3B-201ENST00000299333 DUS4LO95620 317 aaKnown RBP13.42□□□□□ -0.26
SCN3B-201ENST00000299333 HOXC13P31276 330 aa13.42□□□□□ -0.26
SCN3B-201ENST00000299333 MENTQ9BUN1 341 aa13.42□□□□□ -0.26
SCN3B-201ENST00000299333 NGBQ9NPG2 151 aa13.42□□□□□ -0.26
SCN3B-201ENST00000299333 IGHV3-20A0A0C4DH32 117 aa13.41□□□□□ -0.26
SCN3B-201ENST00000299333 BMP5P22003 454 aa13.41□□□□□ -0.26
SCN3B-201ENST00000299333 BADQ92934 168 aa13.41□□□□□ -0.26
SCN3B-201ENST00000299333 STARD4Q96DR4 205 aa13.41□□□□□ -0.26
SCN3B-201ENST00000299333 FOXJ3Q9UPW0 622 aa13.41□□□□□ -0.26
SCN3B-201ENST00000299333 NAV1Q8NEY1 1877 aa13.41□□□□□ -0.26
SCN3B-201ENST00000299333 A0A1W2PR48 441 aa13.41□□□□□ -0.26
SCN3B-201ENST00000299333 SMIM17P0DL12 118 aa13.41□□□□□ -0.26
SCN3B-201ENST00000299333 RPEL1Q2QD12 228 aa13.41□□□□□ -0.26
SCN3B-201ENST00000299333 BCORP1Q8N888 145 aa13.41□□□□□ -0.26
SCN3B-201ENST00000299333 SNX22Q96L94 193 aa13.41□□□□□ -0.26
SCN3B-201ENST00000299333 TAAR6Q96RI8 345 aa13.41□□□□□ -0.26
SCN3B-201ENST00000299333 POLDIP2Q9Y2S7 368 aa13.41□□□□□ -0.26
SCN3B-201ENST00000299333 TSPAN12O95859 305 aa13.41□□□□□ -0.26
SCN3B-201ENST00000299333 CD38P28907 300 aa13.41□□□□□ -0.26
SCN3B-201ENST00000299333 BTNL3Q6UXE8 466 aa13.41□□□□□ -0.26
SCN3B-201ENST00000299333 LINC00696Q6ZRV3 163 aa13.41□□□□□ -0.26
SCN3B-201ENST00000299333 P2RY12Q9H244 342 aa13.41□□□□□ -0.26
SCN3B-201ENST00000299333 C19orf53Q9UNZ5 99 aaPredicted RBP13.41□□□□□ -0.26
SCN3B-201ENST00000299333 ARRDC5A6NEK1 342 aa13.41□□□□□ -0.26
SCN3B-201ENST00000299333 ZNF737O75373 536 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms