RNA–Protein interactions for RNA: ENST00000293889.10

CCDC78-201, Transcript of coiled-coil domain containing 78, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC78, Length 1,611 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-201ENST00000293889 GLYATL3Q5SZD4 288 aa15.33■□□□□ 0.04
CCDC78-201ENST00000293889 MZT2AQ6P582 158 aa15.33■□□□□ 0.04
CCDC78-201ENST00000293889 ZNF704Q6ZNC4 412 aaPredicted RBP15.33■□□□□ 0.04
CCDC78-201ENST00000293889 ABHD4Q8TB40 342 aa15.33■□□□□ 0.04
CCDC78-201ENST00000293889 OR51E1Q8TCB6 317 aa15.33■□□□□ 0.04
CCDC78-201ENST00000293889 RGP1Q92546 391 aaPredicted RBP15.33■□□□□ 0.04
CCDC78-201ENST00000293889 SGK3Q96BR1 496 aa15.33■□□□□ 0.04
CCDC78-201ENST00000293889 COMMD4Q9H0A8 199 aa15.33■□□□□ 0.04
CCDC78-201ENST00000293889 C11orf54Q9H0W9 315 aaPredicted RBP15.33■□□□□ 0.04
CCDC78-201ENST00000293889 ZNF281Q9Y2X9 895 aa15.33■□□□□ 0.04
CCDC78-201ENST00000293889 PKDREJQ9NTG1 2253 aa15.32■□□□□ 0.04
CCDC78-201ENST00000293889 A0A0U1RQV5 110 aa15.32■□□□□ 0.04
CCDC78-201ENST00000293889 H3BSH0 61 aa15.32■□□□□ 0.04
CCDC78-201ENST00000293889 GPRIN2O60269 458 aa15.32■□□□□ 0.04
CCDC78-201ENST00000293889 SMPD2O60906 423 aa15.32■□□□□ 0.04
CCDC78-201ENST00000293889 UBCP0CG48 685 aaKnown RBP15.32■□□□□ 0.04
CCDC78-201ENST00000293889 PTAFRP25105 342 aa15.32■□□□□ 0.04
CCDC78-201ENST00000293889 KIR2DL3P43628 341 aa15.32■□□□□ 0.04
CCDC78-201ENST00000293889 MTNR1BP49286 362 aa15.32■□□□□ 0.04
CCDC78-201ENST00000293889 UCP2P55851 309 aa15.32■□□□□ 0.04
CCDC78-201ENST00000293889 CRYBG3Q68DQ2 2970 aa15.32■□□□□ 0.04
CCDC78-201ENST00000293889 SP5Q6BEB4 398 aaPredicted RBP15.32■□□□□ 0.04
CCDC78-201ENST00000293889 DUSP18Q8NEJ0 188 aa15.32■□□□□ 0.04
CCDC78-201ENST00000293889 OR13C5Q8NGS8 318 aa15.32■□□□□ 0.04
CCDC78-201ENST00000293889 OR10AC1Q8NH08 325 aa15.32■□□□□ 0.04
CCDC78-201ENST00000293889 OR2AE1Q8NHA4 323 aa15.32■□□□□ 0.04
CCDC78-201ENST00000293889 LYZL4Q96KX0 146 aa15.32■□□□□ 0.04
CCDC78-201ENST00000293889 TRAF4Q9BUZ4 470 aaPredicted RBP15.32■□□□□ 0.04
CCDC78-201ENST00000293889 POFUT1Q9H488 388 aa15.32■□□□□ 0.04
CCDC78-201ENST00000293889 HEATR1Q9H583 2144 aaKnown RBP15.32■□□□□ 0.04
CCDC78-201ENST00000293889 GPR84Q9NQS5 396 aa15.32■□□□□ 0.04
CCDC78-201ENST00000293889 CRIM1Q9NZV1 1036 aa15.32■□□□□ 0.04
CCDC78-201ENST00000293889 ADAM30Q9UKF2 790 aa15.32■□□□□ 0.04
CCDC78-201ENST00000293889 A0A1B0GTI1 187 aa15.32■□□□□ 0.04
CCDC78-201ENST00000293889 LOC107986453A0A1B0GWG9 222 aa15.32■□□□□ 0.04
CCDC78-201ENST00000293889 ATP6V1G2-DDX39BF2Z307 99 aa15.32■□□□□ 0.04
CCDC78-201ENST00000293889 CASKO14936 926 aa15.32■□□□□ 0.04
CCDC78-201ENST00000293889 ISG15P05161 165 aa15.32■□□□□ 0.04
CCDC78-201ENST00000293889 S100A1P23297 94 aa15.32■□□□□ 0.04
CCDC78-201ENST00000293889 RPS11P62280 158 aaKnown RBP eCLIP15.32■□□□□ 0.04
CCDC78-201ENST00000293889 TRAM1Q15629 374 aa15.32■□□□□ 0.04
CCDC78-201ENST00000293889 TMEM244Q5VVB8 128 aa15.32■□□□□ 0.04
CCDC78-201ENST00000293889 TMEM91Q6ZNR0 172 aa15.32■□□□□ 0.04
CCDC78-201ENST00000293889 DMRTC2Q8IXT2 367 aaPredicted RBP15.32■□□□□ 0.04
CCDC78-201ENST00000293889 OR51A4Q8NGJ6 313 aa15.32■□□□□ 0.04
CCDC78-201ENST00000293889 KCTD12Q96CX2 325 aaKnown RBP15.32■□□□□ 0.04
CCDC78-201ENST00000293889 SOX7Q9BT81 388 aa15.32■□□□□ 0.04
CCDC78-201ENST00000293889 ESRP2Q9H6T0 727 aaKnown RBP15.32■□□□□ 0.04
CCDC78-201ENST00000293889 ABCD4O14678 606 aa15.31■□□□□ 0.04
CCDC78-201ENST00000293889 IGLV3-1P01715 115 aa15.31■□□□□ 0.04
CCDC78-201ENST00000293889 ACHEP22303 614 aa15.31■□□□□ 0.04
CCDC78-201ENST00000293889 AZGP1P25311 298 aaKnown RBP15.31■□□□□ 0.04
CCDC78-201ENST00000293889 NR4A2P43354 598 aa15.31■□□□□ 0.04
CCDC78-201ENST00000293889 PPP1CBP62140 327 aa15.31■□□□□ 0.04
CCDC78-201ENST00000293889 ZNF92Q03936 586 aa15.31■□□□□ 0.04
CCDC78-201ENST00000293889 INSL4Q14641 139 aa15.31■□□□□ 0.04
CCDC78-201ENST00000293889 YIF1BQ5BJH7 314 aa15.31■□□□□ 0.04
CCDC78-201ENST00000293889 NCMAPQ5T1S8 102 aa15.31■□□□□ 0.04
CCDC78-201ENST00000293889 COMMD2Q86X83 199 aa15.31■□□□□ 0.04
CCDC78-201ENST00000293889 MS4A15Q8N5U1 240 aa15.31■□□□□ 0.04
CCDC78-201ENST00000293889 PLPPR2Q96GM1 343 aa15.31■□□□□ 0.04
CCDC78-201ENST00000293889 REEP6Q96HR9 211 aa15.31■□□□□ 0.04
CCDC78-201ENST00000293889 PTTG3PQ9NZH4 202 aa15.31■□□□□ 0.04
CCDC78-201ENST00000293889 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP15.3■□□□□ 0.04
CCDC78-201ENST00000293889 J3QW42 95 aa15.3■□□□□ 0.04
CCDC78-201ENST00000293889 SIAH2O43255 324 aa15.3■□□□□ 0.04
CCDC78-201ENST00000293889 XRCC2O43543 280 aa15.3■□□□□ 0.04
CCDC78-201ENST00000293889 RGS9O75916 674 aaPredicted RBP15.3■□□□□ 0.04
CCDC78-201ENST00000293889 RAD52P43351 418 aa15.3■□□□□ 0.04
CCDC78-201ENST00000293889 MAGEB1P43366 347 aa15.3■□□□□ 0.04
CCDC78-201ENST00000293889 ERVS71-1P61550 626 aa15.3■□□□□ 0.04
CCDC78-201ENST00000293889 PYDC2Q56P42 97 aa15.3■□□□□ 0.04
CCDC78-201ENST00000293889 SPATA46Q5T0L3 261 aa15.3■□□□□ 0.04
CCDC78-201ENST00000293889 CNIH2Q6PI25 160 aa15.3■□□□□ 0.04
CCDC78-201ENST00000293889 MEX3BQ6ZN04 569 aaKnown RBP15.3■□□□□ 0.04
CCDC78-201ENST00000293889 PIAS4Q8N2W9 510 aaPredicted RBP15.3■□□□□ 0.04
CCDC78-201ENST00000293889 OR5L1Q8NGL2 311 aa15.3■□□□□ 0.04
CCDC78-201ENST00000293889 RADILQ96JH8 1075 aa15.3■□□□□ 0.04
CCDC78-201ENST00000293889 FAM71F1Q96KD3 344 aaPredicted RBP15.3■□□□□ 0.04
CCDC78-201ENST00000293889 RGCCQ9H4X1 137 aa15.3■□□□□ 0.04
CCDC78-201ENST00000293889 RBFOX1Q9NWB1 397 aaKnown RBP15.3■□□□□ 0.04
CCDC78-201ENST00000293889 HHLA2Q9UM44 414 aa15.3■□□□□ 0.04
CCDC78-201ENST00000293889 ASH1LQ9NR48 2969 aaKnown RBP15.3■□□□□ 0.04
CCDC78-201ENST00000293889 A0A1B0GVI7 797 aa15.29■□□□□ 0.04
CCDC78-201ENST00000293889 SHISA3A0PJX4 238 aa15.29■□□□□ 0.04
CCDC78-201ENST00000293889 SYT7O43581 403 aa15.29■□□□□ 0.04
CCDC78-201ENST00000293889 CCL1P22362 96 aa15.29■□□□□ 0.04
CCDC78-201ENST00000293889 MALLQ13021 153 aa15.29■□□□□ 0.04
CCDC78-201ENST00000293889 GK2Q14410 553 aaPredicted RBP15.29■□□□□ 0.04
CCDC78-201ENST00000293889 HLXQ14774 488 aaPredicted RBP15.29■□□□□ 0.04
CCDC78-201ENST00000293889 BEX5Q5H9J7 111 aa15.29■□□□□ 0.04
CCDC78-201ENST00000293889 OR1J1Q8NGS3 322 aa15.29■□□□□ 0.04
CCDC78-201ENST00000293889 GPR148Q8TDV2 347 aa15.29■□□□□ 0.04
CCDC78-201ENST00000293889 FAM222BQ8WU58 562 aa15.29■□□□□ 0.04
CCDC78-201ENST00000293889 SPSB4Q96A44 273 aa15.29■□□□□ 0.04
CCDC78-201ENST00000293889 RNF170Q96K19 258 aa15.29■□□□□ 0.04
CCDC78-201ENST00000293889 BCL2L14Q9BZR8 327 aa15.29■□□□□ 0.04
CCDC78-201ENST00000293889 TRBV5-5A0A0J9YX44 114 aa15.28■□□□□ 0.04
CCDC78-201ENST00000293889 DEFB108AA8MXU0 73 aa15.28■□□□□ 0.04
CCDC78-201ENST00000293889 MYL9P24844 172 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms