RNA–Protein interactions for RNA: ENST00000292476.9

CPSF4-201, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CPSF4, Length 1,691 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-201ENST00000292476 POLR1DQ9Y2S0 133 aa14.76□□□□□ -0.05
CPSF4-201ENST00000292476 NCKAP5O14513 1909 aa14.76□□□□□ -0.05
CPSF4-201ENST00000292476 IGKV1D-43A0A0B4J1Z2 117 aa14.75□□□□□ -0.05
CPSF4-201ENST00000292476 TMEM269A0A1B0GVZ9 245 aa14.75□□□□□ -0.05
CPSF4-201ENST00000292476 SHOXO15266 292 aa14.75□□□□□ -0.05
CPSF4-201ENST00000292476 DHHO43323 396 aa14.75□□□□□ -0.05
CPSF4-201ENST00000292476 H2BFMP0C1H6 154 aa14.75□□□□□ -0.05
CPSF4-201ENST00000292476 HSD11B1P28845 292 aa14.75□□□□□ -0.05
CPSF4-201ENST00000292476 RAB14P61106 215 aa14.75□□□□□ -0.05
CPSF4-201ENST00000292476 OPCMLQ14982 345 aa14.75□□□□□ -0.05
CPSF4-201ENST00000292476 RIPPLY2Q5TAB7 128 aa14.75□□□□□ -0.05
CPSF4-201ENST00000292476 LRFN4Q6PJG9 635 aa14.75□□□□□ -0.05
CPSF4-201ENST00000292476 HIST2H2ABQ8IUE6 130 aaPredicted RBP14.75□□□□□ -0.05
CPSF4-201ENST00000292476 GPR137CQ8N3F9 429 aa14.75□□□□□ -0.05
CPSF4-201ENST00000292476 SEH1LQ96EE3 360 aa14.75□□□□□ -0.05
CPSF4-201ENST00000292476 NUDT16L1Q9BRJ7 211 aaKnown RBP14.75□□□□□ -0.05
CPSF4-201ENST00000292476 MOB1AQ9H8S9 216 aa14.75□□□□□ -0.05
CPSF4-201ENST00000292476 GP6Q9HCN6 339 aa14.75□□□□□ -0.05
CPSF4-201ENST00000292476 CYB5R1Q9UHQ9 305 aa14.75□□□□□ -0.05
CPSF4-201ENST00000292476 ZNF724A8MTY0 619 aa14.74□□□□□ -0.05
CPSF4-201ENST00000292476 CD74P04233 296 aa14.74□□□□□ -0.05
CPSF4-201ENST00000292476 FCGR2AP12318 317 aa14.74□□□□□ -0.05
CPSF4-201ENST00000292476 NFYAP23511 347 aaPredicted RBP14.74□□□□□ -0.05
CPSF4-201ENST00000292476 ZMYND11Q15326 602 aa14.74□□□□□ -0.05
CPSF4-201ENST00000292476 WDFY1Q8IWB7 410 aa14.74□□□□□ -0.05
CPSF4-201ENST00000292476 MCEMP1Q8IX19 187 aa14.74□□□□□ -0.05
CPSF4-201ENST00000292476 OR2AK2Q8NG84 335 aa14.74□□□□□ -0.05
CPSF4-201ENST00000292476 OR51S1Q8NGJ8 323 aa14.74□□□□□ -0.05
CPSF4-201ENST00000292476 ZNF845Q96IR2 970 aaPredicted RBP14.74□□□□□ -0.05
CPSF4-201ENST00000292476 UQCC2Q9BRT2 126 aa14.74□□□□□ -0.05
CPSF4-201ENST00000292476 NELFAQ9H3P2 528 aa14.74□□□□□ -0.05
CPSF4-201ENST00000292476 OPN4Q9UHM6 478 aa14.74□□□□□ -0.05
CPSF4-201ENST00000292476 KIF25Q9UIL4 384 aa14.74□□□□□ -0.05
CPSF4-201ENST00000292476 RAB22AQ9UL26 194 aa14.74□□□□□ -0.05
CPSF4-201ENST00000292476 CSAG2Q9Y5P2 127 aa14.74□□□□□ -0.05
CPSF4-201ENST00000292476 BOD1L1Q8NFC6 3051 aa14.74□□□□□ -0.05
CPSF4-201ENST00000292476 FREM3P0C091 2139 aa14.74□□□□□ -0.05
CPSF4-201ENST00000292476 L7N2F9 121 aa14.74□□□□□ -0.05
CPSF4-201ENST00000292476 MRPL33O75394 65 aaKnown RBP14.74□□□□□ -0.05
CPSF4-201ENST00000292476 MPZL1O95297 269 aa14.74□□□□□ -0.05
CPSF4-201ENST00000292476 MSR1P21757 451 aa14.74□□□□□ -0.05
CPSF4-201ENST00000292476 MPZP25189 248 aa14.74□□□□□ -0.05
CPSF4-201ENST00000292476 SSTR2P30874 369 aa14.74□□□□□ -0.05
CPSF4-201ENST00000292476 GUCA2AQ02747 115 aa14.74□□□□□ -0.05
CPSF4-201ENST00000292476 STK11Q15831 433 aa14.74□□□□□ -0.05
CPSF4-201ENST00000292476 RPUSD3Q6P087 351 aaKnown RBP14.74□□□□□ -0.05
CPSF4-201ENST00000292476 FOXL2NBQ6ZUU3 175 aa14.74□□□□□ -0.05
CPSF4-201ENST00000292476 CPT1CQ8TCG5 803 aa14.74□□□□□ -0.05
CPSF4-201ENST00000292476 C17orf50Q8WW18 174 aa14.74□□□□□ -0.05
CPSF4-201ENST00000292476 PPP1R14AQ96A00 147 aa14.74□□□□□ -0.05
CPSF4-201ENST00000292476 CHIAQ9BZP6 476 aa14.74□□□□□ -0.05
CPSF4-201ENST00000292476 FAM206AQ9NX38 181 aa14.74□□□□□ -0.05
CPSF4-201ENST00000292476 FBLN5Q9UBX5 448 aa14.74□□□□□ -0.05
CPSF4-201ENST00000292476 NOSIPQ9Y314 301 aaKnown RBP14.74□□□□□ -0.05
CPSF4-201ENST00000292476 RHBDD3Q9Y3P4 386 aa14.74□□□□□ -0.05
CPSF4-201ENST00000292476 ZNF175Q9Y473 711 aa14.74□□□□□ -0.05
CPSF4-201ENST00000292476 METTL21EPA6NDL7 271 aa14.73□□□□□ -0.05
CPSF4-201ENST00000292476 MCRIP1C9JLW8 97 aa14.73□□□□□ -0.05
CPSF4-201ENST00000292476 H3BSH0 61 aa14.73□□□□□ -0.05
CPSF4-201ENST00000292476 H3BUI4 141 aa14.73□□□□□ -0.05
CPSF4-201ENST00000292476 RAB3DO95716 219 aa14.73□□□□□ -0.05
CPSF4-201ENST00000292476 CD3DP04234 171 aa14.73□□□□□ -0.05
CPSF4-201ENST00000292476 RLN1P04808 185 aa14.73□□□□□ -0.05
CPSF4-201ENST00000292476 GSK3AP49840 483 aa14.73□□□□□ -0.05
CPSF4-201ENST00000292476 PMPCAQ10713 525 aa14.73□□□□□ -0.05
CPSF4-201ENST00000292476 MEF2DQ14814 521 aa14.73□□□□□ -0.05
CPSF4-201ENST00000292476 RNFT1Q5M7Z0 435 aa14.73□□□□□ -0.05
CPSF4-201ENST00000292476 KLHL24Q6TFL4 600 aa14.73□□□□□ -0.05
CPSF4-201ENST00000292476 Q6ZS92 163 aa14.73□□□□□ -0.05
CPSF4-201ENST00000292476 SARAFQ96BY9 339 aa14.73□□□□□ -0.05
CPSF4-201ENST00000292476 ELMOD3Q96FG2 381 aa14.73□□□□□ -0.05
CPSF4-201ENST00000292476 ABHD17AQ96GS6 310 aa14.73□□□□□ -0.05
CPSF4-201ENST00000292476 WDYHV1Q96HA8 205 aa14.73□□□□□ -0.05
CPSF4-201ENST00000292476 RBM24Q9BX46 236 aaKnown RBP14.73□□□□□ -0.05
CPSF4-201ENST00000292476 GSX2Q9BZM3 304 aa14.73□□□□□ -0.05
CPSF4-201ENST00000292476 BCO1Q9HAY6 547 aa14.73□□□□□ -0.05
CPSF4-201ENST00000292476 ZNF71Q9NQZ8 489 aaPredicted RBP14.73□□□□□ -0.05
CPSF4-201ENST00000292476 SLC2A8Q9NY64 477 aa14.73□□□□□ -0.05
CPSF4-201ENST00000292476 F5H5P2 479 aa14.72□□□□□ -0.05
CPSF4-201ENST00000292476 AQP7O14520 342 aa14.72□□□□□ -0.05
CPSF4-201ENST00000292476 C1QL1O75973 258 aa14.72□□□□□ -0.05
CPSF4-201ENST00000292476 TOXO94900 526 aa14.72□□□□□ -0.05
CPSF4-201ENST00000292476 BPNT1O95861 308 aa14.72□□□□□ -0.05
CPSF4-201ENST00000292476 CYB5AP00167 134 aa14.72□□□□□ -0.05
CPSF4-201ENST00000292476 BDKRB2P30411 391 aa14.72□□□□□ -0.05
CPSF4-201ENST00000292476 GMFBP60983 142 aa14.72□□□□□ -0.05
CPSF4-201ENST00000292476 SEC61A1P61619 476 aaKnown RBP14.72□□□□□ -0.05
CPSF4-201ENST00000292476 MRPS34P82930 218 aaKnown RBP14.72□□□□□ -0.05
CPSF4-201ENST00000292476 OTPQ5XKR4 325 aa14.72□□□□□ -0.05
CPSF4-201ENST00000292476 OR4D10Q8NGI6 311 aa14.72□□□□□ -0.05
CPSF4-201ENST00000292476 ABHD3Q8WU67 409 aa14.72□□□□□ -0.05
CPSF4-201ENST00000292476 SLAMF6Q96DU3 332 aa14.72□□□□□ -0.05
CPSF4-201ENST00000292476 LINC00470Q9BZP3 86 aa14.72□□□□□ -0.05
CPSF4-201ENST00000292476 GLRX2Q9NS18 164 aa14.72□□□□□ -0.05
CPSF4-201ENST00000292476 MED9Q9NWA0 146 aa14.72□□□□□ -0.05
CPSF4-201ENST00000292476 KIAA1549Q9HCM3 1950 aa14.72□□□□□ -0.05
CPSF4-201ENST00000292476 ERCC1P07992 297 aaPredicted RBP14.71□□□□□ -0.05
CPSF4-201ENST00000292476 CXCL2P19875 107 aa14.71□□□□□ -0.05
CPSF4-201ENST00000292476 SGCAQ16586 387 aa14.71□□□□□ -0.05
CPSF4-201ENST00000292476 NRN1LQ496H8 165 aa14.71□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms