RNA–Protein interactions for RNA: ENST00000291458.9

CCDC58-201, Transcript of coiled-coil domain containing 58, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC58, Length 720 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-201ENST00000291458 CIB1Q99828 191 aa8.17□□□□□ -1.1
CCDC58-201ENST00000291458 MRI1Q9BV20 369 aa8.17□□□□□ -1.1
CCDC58-201ENST00000291458 PRRG3Q9BZD7 231 aa8.17□□□□□ -1.1
CCDC58-201ENST00000291458 SLC22A4Q9H015 551 aa8.17□□□□□ -1.1
CCDC58-201ENST00000291458 OPA3Q9H6K4 179 aa8.17□□□□□ -1.1
CCDC58-201ENST00000291458 TMEM165Q9HC07 324 aa8.17□□□□□ -1.1
CCDC58-201ENST00000291458 MRPL15Q9P015 296 aaKnown RBP8.17□□□□□ -1.1
CCDC58-201ENST00000291458 RNF7Q9UBF6 113 aa8.17□□□□□ -1.1
CCDC58-201ENST00000291458 OPN4Q9UHM6 478 aa8.17□□□□□ -1.1
CCDC58-201ENST00000291458 OAZ3Q9UMX2 235 aa8.17□□□□□ -1.1
CCDC58-201ENST00000291458 LRCH1Q9Y2L9 728 aa8.17□□□□□ -1.1
CCDC58-201ENST00000291458 NOP16Q9Y3C1 178 aaKnown RBP8.17□□□□□ -1.1
CCDC58-201ENST00000291458 RHBDD3Q9Y3P4 386 aa8.17□□□□□ -1.1
CCDC58-201ENST00000291458 AUP1Q9Y679 476 aa8.17□□□□□ -1.1
CCDC58-201ENST00000291458 ANK3Q12955 4377 aaKnown RBP8.17□□□□□ -1.1
CCDC58-201ENST00000291458 IGHV2-70DA0A0C4DH43 119 aa8.16□□□□□ -1.1
CCDC58-201ENST00000291458 ZNF850A8MQ14 1090 aa8.16□□□□□ -1.1
CCDC58-201ENST00000291458 H3BSH0 61 aa8.16□□□□□ -1.1
CCDC58-201ENST00000291458 J3QLI3 93 aa8.16□□□□□ -1.1
CCDC58-201ENST00000291458 ADAM20O43506 726 aa8.16□□□□□ -1.1
CCDC58-201ENST00000291458 CUBNO60494 3623 aa8.16□□□□□ -1.1
CCDC58-201ENST00000291458 GMDSO60547 372 aa8.16□□□□□ -1.1
CCDC58-201ENST00000291458 APOC1P02654 83 aa8.16□□□□□ -1.1
CCDC58-201ENST00000291458 TFF1P04155 84 aa8.16□□□□□ -1.1
CCDC58-201ENST00000291458 ZNF12P17014 697 aa8.16□□□□□ -1.1
CCDC58-201ENST00000291458 ACKR3P25106 362 aa8.16□□□□□ -1.1
CCDC58-201ENST00000291458 GATA4P43694 442 aa8.16□□□□□ -1.1
CCDC58-201ENST00000291458 MFGE8Q08431 387 aaPredicted RBP8.16□□□□□ -1.1
CCDC58-201ENST00000291458 PRDX4Q13162 271 aa8.16□□□□□ -1.1
CCDC58-201ENST00000291458 SCGB2A2Q13296 93 aa8.16□□□□□ -1.1
CCDC58-201ENST00000291458 ATRQ13535 2644 aa8.16□□□□□ -1.1
CCDC58-201ENST00000291458 KPNB1Q14974 876 aaKnown RBP8.16□□□□□ -1.1
CCDC58-201ENST00000291458 SHISA2Q6UWI4 295 aa8.16□□□□□ -1.1
CCDC58-201ENST00000291458 BTNL3Q6UXE8 466 aa8.16□□□□□ -1.1
CCDC58-201ENST00000291458 WDR86Q86TI4 376 aa8.16□□□□□ -1.1
CCDC58-201ENST00000291458 ZDHHC13Q8IUH4 622 aa8.16□□□□□ -1.1
CCDC58-201ENST00000291458 SLC35F2Q8IXU6 374 aa8.16□□□□□ -1.1
CCDC58-201ENST00000291458 FGFRL1Q8N441 504 aa8.16□□□□□ -1.1
CCDC58-201ENST00000291458 SEMA6DQ8NFY4 1073 aa8.16□□□□□ -1.1
CCDC58-201ENST00000291458 OR52H1Q8NGJ2 320 aa8.16□□□□□ -1.1
CCDC58-201ENST00000291458 Q8TCH9 128 aa8.16□□□□□ -1.1
CCDC58-201ENST00000291458 PIGCQ92535 297 aa8.16□□□□□ -1.1
CCDC58-201ENST00000291458 SPSB4Q96A44 273 aa8.16□□□□□ -1.1
CCDC58-201ENST00000291458 SEH1LQ96EE3 360 aa8.16□□□□□ -1.1
CCDC58-201ENST00000291458 NRBF2Q96F24 287 aa8.16□□□□□ -1.1
CCDC58-201ENST00000291458 FAM71F1Q96KD3 344 aaPredicted RBP8.16□□□□□ -1.1
CCDC58-201ENST00000291458 LYZL4Q96KX0 146 aa8.16□□□□□ -1.1
CCDC58-201ENST00000291458 MRPL18Q9H0U6 180 aaKnown RBP8.16□□□□□ -1.1
CCDC58-201ENST00000291458 NIPAL2Q9H841 368 aa8.16□□□□□ -1.1
CCDC58-201ENST00000291458 SP140LQ9H930 580 aa8.16□□□□□ -1.1
CCDC58-201ENST00000291458 SMURF1Q9HCE7 757 aa8.16□□□□□ -1.1
CCDC58-201ENST00000291458 C14orf119Q9NWQ9 140 aa8.16□□□□□ -1.1
CCDC58-201ENST00000291458 H2AFY2Q9P0M6 372 aaPredicted RBP8.16□□□□□ -1.1
CCDC58-201ENST00000291458 CTSZQ9UBR2 303 aa8.16□□□□□ -1.1
CCDC58-201ENST00000291458 CLN8Q9UBY8 286 aa8.16□□□□□ -1.1
CCDC58-201ENST00000291458 MIOXQ9UGB7 285 aa8.16□□□□□ -1.1
CCDC58-201ENST00000291458 INSIG2Q9Y5U4 225 aa8.16□□□□□ -1.1
CCDC58-201ENST00000291458 FBN1P35555 2871 aaKnown RBP8.15□□□□□ -1.1
CCDC58-201ENST00000291458 A0A1B0GW55 424 aa8.15□□□□□ -1.1
CCDC58-201ENST00000291458 A0A1B0GWJ7 208 aa8.15□□□□□ -1.1
CCDC58-201ENST00000291458 OOEPA6NGQ2 149 aa8.15□□□□□ -1.1
CCDC58-201ENST00000291458 ANXA2P2A6NMY6 339 aa8.15□□□□□ -1.1
CCDC58-201ENST00000291458 ZAR1LA6NP61 321 aa8.15□□□□□ -1.1
CCDC58-201ENST00000291458 A8MXK9 166 aa8.15□□□□□ -1.1
CCDC58-201ENST00000291458 C22orf46C9J442 243 aa8.15□□□□□ -1.1
CCDC58-201ENST00000291458 LGALS8O00214 317 aa8.15□□□□□ -1.1
CCDC58-201ENST00000291458 EIF4EBP3O60516 100 aaPredicted RBP8.15□□□□□ -1.1
CCDC58-201ENST00000291458 WNT2P09544 360 aa8.15□□□□□ -1.1
CCDC58-201ENST00000291458 DUX4L2P0CJ85 424 aa8.15□□□□□ -1.1
CCDC58-201ENST00000291458 DUX4L3P0CJ86 424 aa8.15□□□□□ -1.1
CCDC58-201ENST00000291458 DUX4L4P0CJ87 422 aa8.15□□□□□ -1.1
CCDC58-201ENST00000291458 DUX4L5P0CJ88 424 aa8.15□□□□□ -1.1
CCDC58-201ENST00000291458 DUX4L6P0CJ89 424 aa8.15□□□□□ -1.1
CCDC58-201ENST00000291458 DUX4L7P0CJ90 424 aa8.15□□□□□ -1.1
CCDC58-201ENST00000291458 FCGR1AP12314 374 aa8.15□□□□□ -1.1
CCDC58-201ENST00000291458 GATA3P23771 443 aa8.15□□□□□ -1.1
CCDC58-201ENST00000291458 POLR2IP36954 125 aaKnown RBP8.15□□□□□ -1.1
CCDC58-201ENST00000291458 CXCR4P61073 352 aa8.15□□□□□ -1.1
CCDC58-201ENST00000291458 ESRRGP62508 458 aa8.15□□□□□ -1.1
CCDC58-201ENST00000291458 ODF4Q2M2E3 257 aa8.15□□□□□ -1.1
CCDC58-201ENST00000291458 ZNF181Q2M3W8 571 aa8.15□□□□□ -1.1
CCDC58-201ENST00000291458 CEP78Q5JTW2 689 aa8.15□□□□□ -1.1
CCDC58-201ENST00000291458 SLX4IPQ5VYV7 408 aa8.15□□□□□ -1.1
CCDC58-201ENST00000291458 KDM4DQ6B0I6 523 aa8.15□□□□□ -1.1
CCDC58-201ENST00000291458 DUX4L9Q6RFH8 374 aaPredicted RBP8.15□□□□□ -1.1
CCDC58-201ENST00000291458 DCDC5Q6ZRR9 648 aa8.15□□□□□ -1.1
CCDC58-201ENST00000291458 PRSS45Q7RTY3 260 aa8.15□□□□□ -1.1
CCDC58-201ENST00000291458 BCL6BQ8N143 479 aaPredicted RBP8.15□□□□□ -1.1
CCDC58-201ENST00000291458 BATF2Q8N1L9 274 aa8.15□□□□□ -1.1
CCDC58-201ENST00000291458 PARP8Q8N3A8 854 aa8.15□□□□□ -1.1
CCDC58-201ENST00000291458 TEX29Q8N6K0 151 aa8.15□□□□□ -1.1
CCDC58-201ENST00000291458 CELF2-AS1Q8N7Q2 184 aa8.15□□□□□ -1.1
CCDC58-201ENST00000291458 SIGLECL1Q8N7X8 197 aa8.15□□□□□ -1.1
CCDC58-201ENST00000291458 OR1M1Q8NGA1 313 aa8.15□□□□□ -1.1
CCDC58-201ENST00000291458 OR51G2Q8NGK0 314 aa8.15□□□□□ -1.1
CCDC58-201ENST00000291458 TMEM163Q8TC26 289 aa8.15□□□□□ -1.1
CCDC58-201ENST00000291458 ST8SIA4Q92187 359 aa8.15□□□□□ -1.1
CCDC58-201ENST00000291458 RPL3LQ92901 407 aaKnown RBP8.15□□□□□ -1.1
CCDC58-201ENST00000291458 PPP1R14AQ96A00 147 aa8.15□□□□□ -1.1
CCDC58-201ENST00000291458 APOL4Q9BPW4 351 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms