RNA–Protein interactions for RNA: ENST00000282516.12

NIPBL-201, Transcript of NIPBL, cohesin loading factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NIPBL, Length 10,435 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-201ENST00000282516 PCYT2Q99447 389 aa7.92□□□□□ -1.14
NIPBL-201ENST00000282516 SLAMF8Q9P0V8 285 aa7.92□□□□□ -1.14
NIPBL-201ENST00000282516 LHX3Q9UBR4 397 aa7.92□□□□□ -1.14
NIPBL-201ENST00000282516 CACNA1EQ15878 2313 aa7.92□□□□□ -1.14
NIPBL-201ENST00000282516 HOXC11O43248 304 aaPredicted RBP7.92□□□□□ -1.14
NIPBL-201ENST00000282516 SLC10A3P09131 477 aa7.92□□□□□ -1.14
NIPBL-201ENST00000282516 CD99P14209 185 aa7.92□□□□□ -1.14
NIPBL-201ENST00000282516 PRDX4Q13162 271 aa7.92□□□□□ -1.14
NIPBL-201ENST00000282516 WDTC1Q8N5D0 677 aa7.92□□□□□ -1.14
NIPBL-201ENST00000282516 RNF2Q99496 336 aa7.92□□□□□ -1.14
NIPBL-201ENST00000282516 MAP1LC3CQ9BXW4 147 aa7.92□□□□□ -1.14
NIPBL-201ENST00000282516 CXorf36Q9H7Y0 433 aa7.92□□□□□ -1.14
NIPBL-201ENST00000282516 EMCNQ9ULC0 261 aa7.92□□□□□ -1.14
NIPBL-201ENST00000282516 M0R2Z0 102 aa7.92□□□□□ -1.14
NIPBL-201ENST00000282516 GUSBP08236 651 aa7.92□□□□□ -1.14
NIPBL-201ENST00000282516 ZNF547Q8IVP9 402 aa7.92□□□□□ -1.14
NIPBL-201ENST00000282516 BATF2Q8N1L9 274 aa7.92□□□□□ -1.14
NIPBL-201ENST00000282516 TMEM40Q8WWA1 233 aa7.92□□□□□ -1.14
NIPBL-201ENST00000282516 FGF13Q92913 245 aa7.92□□□□□ -1.14
NIPBL-201ENST00000282516 FGF21Q9NSA1 209 aa7.92□□□□□ -1.14
NIPBL-201ENST00000282516 MARCH5Q9NX47 278 aa7.92□□□□□ -1.14
NIPBL-201ENST00000282516 ST3GAL6Q9Y274 331 aa7.92□□□□□ -1.14
NIPBL-201ENST00000282516 AMMECR1Q9Y4X0 333 aaPredicted RBP7.92□□□□□ -1.14
NIPBL-201ENST00000282516 OPRM1P35372 400 aa7.92□□□□□ -1.14
NIPBL-201ENST00000282516 LIM2P55344 173 aa7.92□□□□□ -1.14
NIPBL-201ENST00000282516 CLDN10P78369 228 aa7.92□□□□□ -1.14
NIPBL-201ENST00000282516 ZNF788Q6ZQV5 615 aa7.92□□□□□ -1.14
NIPBL-201ENST00000282516 KLF16Q9BXK1 252 aaPredicted RBP7.92□□□□□ -1.14
NIPBL-201ENST00000282516 MDH2P40926 338 aaKnown RBP7.92□□□□□ -1.14
NIPBL-201ENST00000282516 RPL30P62888 115 aaKnown RBP7.92□□□□□ -1.14
NIPBL-201ENST00000282516 SIX1Q15475 284 aaPredicted RBP7.92□□□□□ -1.14
NIPBL-201ENST00000282516 CLLU1OSQ5K130 101 aa7.92□□□□□ -1.14
NIPBL-201ENST00000282516 COX20Q5RI15 118 aa7.92□□□□□ -1.14
NIPBL-201ENST00000282516 TMEM65Q6PI78 240 aa7.92□□□□□ -1.14
NIPBL-201ENST00000282516 SLCO4C1Q6ZQN7 724 aa7.92□□□□□ -1.14
NIPBL-201ENST00000282516 CALHM3Q86XJ0 350 aa7.92□□□□□ -1.14
NIPBL-201ENST00000282516 NANOGP1Q8N7R0 232 aa7.92□□□□□ -1.14
NIPBL-201ENST00000282516 SARAFQ96BY9 339 aa7.92□□□□□ -1.14
NIPBL-201ENST00000282516 MISP3Q96FF7 219 aa7.92□□□□□ -1.14
NIPBL-201ENST00000282516 MIEN1Q9BRT3 115 aa7.92□□□□□ -1.14
NIPBL-201ENST00000282516 EDEM2Q9BV94 578 aa7.92□□□□□ -1.14
NIPBL-201ENST00000282516 CDCA4Q9BXL8 241 aa7.92□□□□□ -1.14
NIPBL-201ENST00000282516 T-ENOLP0DO92 83 aa7.91□□□□□ -1.14
NIPBL-201ENST00000282516 TAS2R60P59551 318 aa7.91□□□□□ -1.14
NIPBL-201ENST00000282516 JAG1P78504 1218 aa7.91□□□□□ -1.14
NIPBL-201ENST00000282516 NHSL2Q5HYW2 709 aa7.91□□□□□ -1.14
NIPBL-201ENST00000282516 MOB3BQ86TA1 216 aa7.91□□□□□ -1.14
NIPBL-201ENST00000282516 OR52N4Q8NGI2 321 aa7.91□□□□□ -1.14
NIPBL-201ENST00000282516 OR6S1Q8NH40 331 aa7.91□□□□□ -1.14
NIPBL-201ENST00000282516 RAB37Q96AX2 223 aa7.91□□□□□ -1.14
NIPBL-201ENST00000282516 RAB40CQ96S21 281 aa7.91□□□□□ -1.14
NIPBL-201ENST00000282516 SLC35B3Q9H1N7 401 aa7.91□□□□□ -1.14
NIPBL-201ENST00000282516 UQCC1Q9NVA1 299 aa7.91□□□□□ -1.14
NIPBL-201ENST00000282516 ECM29Q5VYK3 1845 aa7.91□□□□□ -1.14
NIPBL-201ENST00000282516 CST5P28325 142 aaPredicted RBP7.91□□□□□ -1.14
NIPBL-201ENST00000282516 IGFBP7Q16270 282 aa7.91□□□□□ -1.14
NIPBL-201ENST00000282516 COX19Q49B96 90 aa7.91□□□□□ -1.14
NIPBL-201ENST00000282516 WDR74Q6RFH5 385 aaPredicted RBP7.91□□□□□ -1.14
NIPBL-201ENST00000282516 ZNF680Q8NEM1 530 aa7.91□□□□□ -1.14
NIPBL-201ENST00000282516 RTN4IP1Q8WWV3 396 aaPredicted RBP7.91□□□□□ -1.14
NIPBL-201ENST00000282516 EDAQ92838 391 aa7.91□□□□□ -1.14
NIPBL-201ENST00000282516 SLC7A10Q9NS82 523 aa7.91□□□□□ -1.14
NIPBL-201ENST00000282516 HSD17B13Q7Z5P4 300 aaPredicted RBP7.91□□□□□ -1.14
NIPBL-201ENST00000282516 OR2J1Q9GZK6 312 aa7.91□□□□□ -1.14
NIPBL-201ENST00000282516 NXF2Q9GZY0 626 aaKnown RBP7.91□□□□□ -1.14
NIPBL-201ENST00000282516 MAP1LC3B2A6NCE7 125 aa7.91□□□□□ -1.14
NIPBL-201ENST00000282516 CLEC2LP0C7M8 214 aa7.91□□□□□ -1.14
NIPBL-201ENST00000282516 ZBTB25P24278 435 aa7.91□□□□□ -1.14
NIPBL-201ENST00000282516 CLDN20P56880 219 aa7.91□□□□□ -1.14
NIPBL-201ENST00000282516 ZNF816Q0VGE8 651 aaPredicted RBP7.91□□□□□ -1.14
NIPBL-201ENST00000282516 DHRS4L2Q6PKH6 230 aa7.91□□□□□ -1.14
NIPBL-201ENST00000282516 OR1N2Q8NGR9 330 aa7.91□□□□□ -1.14
NIPBL-201ENST00000282516 ATOH1Q92858 354 aaPredicted RBP7.91□□□□□ -1.14
NIPBL-201ENST00000282516 APOBEC3DQ96AK3 386 aaPredicted RBP7.91□□□□□ -1.14
NIPBL-201ENST00000282516 MAP1LC3BQ9GZQ8 125 aa7.91□□□□□ -1.14
NIPBL-201ENST00000282516 ADGRL4Q9HBW9 690 aa7.91□□□□□ -1.14
NIPBL-201ENST00000282516 AMDHD2Q9Y303 409 aa7.91□□□□□ -1.14
NIPBL-201ENST00000282516 USP3Q9Y6I4 520 aa7.91□□□□□ -1.14
NIPBL-201ENST00000282516 KIF13BQ9NQT8 1826 aa7.91□□□□□ -1.14
NIPBL-201ENST00000282516 SLC22A20A6NK97 555 aa7.91□□□□□ -1.14
NIPBL-201ENST00000282516 KLF7O75840 302 aaPredicted RBP7.91□□□□□ -1.14
NIPBL-201ENST00000282516 LIPAP38571 399 aa7.91□□□□□ -1.14
NIPBL-201ENST00000282516 MIDNQ504T8 468 aa7.91□□□□□ -1.14
NIPBL-201ENST00000282516 SLC39A5Q6ZMH5 540 aa7.91□□□□□ -1.14
NIPBL-201ENST00000282516 BPIFA4PQ86YQ2 179 aa7.91□□□□□ -1.14
NIPBL-201ENST00000282516 OR4C12Q96R67 309 aa7.91□□□□□ -1.14
NIPBL-201ENST00000282516 SDCBPO00560 298 aaPredicted RBP7.91□□□□□ -1.14
NIPBL-201ENST00000282516 BCL3P20749 454 aa7.91□□□□□ -1.14
NIPBL-201ENST00000282516 CSNK1EP49674 416 aaKnown RBP7.91□□□□□ -1.14
NIPBL-201ENST00000282516 DLX1P56177 255 aa7.91□□□□□ -1.14
NIPBL-201ENST00000282516 CDC20Q12834 499 aa7.91□□□□□ -1.14
NIPBL-201ENST00000282516 INPP5JQ15735 1006 aaPredicted RBP7.91□□□□□ -1.14
NIPBL-201ENST00000282516 LILRA2Q8N149 483 aa7.91□□□□□ -1.14
NIPBL-201ENST00000282516 OXGR1Q96P68 337 aa7.91□□□□□ -1.14
NIPBL-201ENST00000282516 HCFC1R1Q9NWW0 138 aa7.91□□□□□ -1.14
NIPBL-201ENST00000282516 ICAM5Q9UMF0 924 aa7.91□□□□□ -1.14
NIPBL-201ENST00000282516 HS3ST2Q9Y278 367 aa7.91□□□□□ -1.14
NIPBL-201ENST00000282516 OPN1MWP04001 364 aa7.91□□□□□ -1.14
NIPBL-201ENST00000282516 OPN1MW2P0DN77 364 aa7.91□□□□□ -1.14
NIPBL-201ENST00000282516 OPN1MW3P0DN78 364 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 379.9 ms