RNA–Protein interactions for RNA: ENST00000278385.10

CD44-202, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 697 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-202ENST00000278385 ARL5AQ9Y689 179 aa3.82□□□□□ -1.8
CD44-202ENST00000278385 MIA3Q5JRA6 1907 aa3.82□□□□□ -1.8
CD44-202ENST00000278385 DMDP11532 3685 aa3.81□□□□□ -1.8
CD44-202ENST00000278385 IGLV3-10A0A075B6K4 115 aa3.81□□□□□ -1.8
CD44-202ENST00000278385 LY6G6EA0A0G2JKS1 128 aa3.81□□□□□ -1.8
CD44-202ENST00000278385 TRBV4-1A0A0J9YWV2 114 aa3.81□□□□□ -1.8
CD44-202ENST00000278385 CXorf51AA0A1B0GTR3 108 aa3.81□□□□□ -1.8
CD44-202ENST00000278385 OR5H15A6NDH6 313 aa3.81□□□□□ -1.8
CD44-202ENST00000278385 EFCAB10A6NFE3 127 aa3.81□□□□□ -1.8
CD44-202ENST00000278385 SIGLEC16A6NMB1 481 aa3.81□□□□□ -1.8
CD44-202ENST00000278385 ZNF729A6NN14 1252 aaPredicted RBP3.81□□□□□ -1.8
CD44-202ENST00000278385 RNF212BA8MTL3 300 aa3.81□□□□□ -1.8
CD44-202ENST00000278385 HACD1B0YJ81 288 aa3.81□□□□□ -1.8
CD44-202ENST00000278385 SNURFLB1AK76 121 aa3.81□□□□□ -1.8
CD44-202ENST00000278385 GFYI3L273 518 aa3.81□□□□□ -1.8
CD44-202ENST00000278385 SLC1A7O00341 560 aa3.81□□□□□ -1.8
CD44-202ENST00000278385 KMOO15229 486 aa3.81□□□□□ -1.8
CD44-202ENST00000278385 XPNPEP2O43895 674 aa3.81□□□□□ -1.8
CD44-202ENST00000278385 MPZL2O60487 215 aa3.81□□□□□ -1.8
CD44-202ENST00000278385 MAGEC1O60732 1142 aa3.81□□□□□ -1.8
CD44-202ENST00000278385 RAMP1O60894 148 aa3.81□□□□□ -1.8
CD44-202ENST00000278385 CLIC3O95833 236 aa3.81□□□□□ -1.8
CD44-202ENST00000278385 ISG15P05161 165 aa3.81□□□□□ -1.8
CD44-202ENST00000278385 HOXD4P09016 255 aaPredicted RBP3.81□□□□□ -1.8
CD44-202ENST00000278385 CSNK2A2P19784 350 aaPredicted RBP3.81□□□□□ -1.8
CD44-202ENST00000278385 FUT3P21217 361 aa3.81□□□□□ -1.8
CD44-202ENST00000278385 GNRHRP30968 328 aa3.81□□□□□ -1.8
CD44-202ENST00000278385 SDC4P31431 198 aa3.81□□□□□ -1.8
CD44-202ENST00000278385 DCTP40126 519 aa3.81□□□□□ -1.8
CD44-202ENST00000278385 TFPI2P48307 235 aa3.81□□□□□ -1.8
CD44-202ENST00000278385 OR10A3P58181 314 aa3.81□□□□□ -1.8
CD44-202ENST00000278385 DCDC1P59894 354 aa3.81□□□□□ -1.8
CD44-202ENST00000278385 FAM3AP98173 230 aa3.81□□□□□ -1.8
CD44-202ENST00000278385 HMGCS1Q01581 520 aa3.81□□□□□ -1.8
CD44-202ENST00000278385 TNFRSF9Q07011 255 aa3.81□□□□□ -1.8
CD44-202ENST00000278385 ARL16Q0P5N6 197 aa3.81□□□□□ -1.8
CD44-202ENST00000278385 OR5I1Q13606 314 aa3.81□□□□□ -1.8
CD44-202ENST00000278385 OXA1LQ15070 435 aa3.81□□□□□ -1.8
CD44-202ENST00000278385 CST6Q15828 149 aa3.81□□□□□ -1.8
CD44-202ENST00000278385 TRIM16LQ309B1 348 aa3.81□□□□□ -1.8
CD44-202ENST00000278385 CCDC58Q4VC31 144 aa3.81□□□□□ -1.8
CD44-202ENST00000278385 SPANXN4Q5MJ08 99 aa3.81□□□□□ -1.8
CD44-202ENST00000278385 FNBP1LQ5T0N5 605 aa3.81□□□□□ -1.8
CD44-202ENST00000278385 MARC1Q5VT66 337 aa3.81□□□□□ -1.8
CD44-202ENST00000278385 SAXO2Q658L1 398 aa3.81□□□□□ -1.8
CD44-202ENST00000278385 AWAT2Q6E213 333 aa3.81□□□□□ -1.8
CD44-202ENST00000278385 CD200R1LQ6Q8B3 271 aa3.81□□□□□ -1.8
CD44-202ENST00000278385 FAM92BQ6ZTR7 304 aa3.81□□□□□ -1.8
CD44-202ENST00000278385 STRADAQ7RTN6 431 aa3.81□□□□□ -1.8
CD44-202ENST00000278385 FAM19A1Q7Z5A9 133 aa3.81□□□□□ -1.8
CD44-202ENST00000278385 OR4N5Q8IXE1 308 aa3.81□□□□□ -1.8
CD44-202ENST00000278385 STK40Q8N2I9 435 aa3.81□□□□□ -1.8
CD44-202ENST00000278385 PRELID2Q8N945 189 aa3.81□□□□□ -1.8
CD44-202ENST00000278385 SLC37A3Q8NCC5 494 aa3.81□□□□□ -1.8
CD44-202ENST00000278385 DEFB124Q8NES8 71 aa3.81□□□□□ -1.8
CD44-202ENST00000278385 OR2T12Q8NG77 320 aa3.81□□□□□ -1.8
CD44-202ENST00000278385 RNF138Q8WVD3 245 aa3.81□□□□□ -1.8
CD44-202ENST00000278385 TFB1MQ8WVM0 346 aaKnown RBP3.81□□□□□ -1.8
CD44-202ENST00000278385 RXFP2Q8WXD0 754 aa3.81□□□□□ -1.8
CD44-202ENST00000278385 RAB3CQ96E17 227 aa3.81□□□□□ -1.8
CD44-202ENST00000278385 Q96MT0 163 aa3.81□□□□□ -1.8
CD44-202ENST00000278385 SDHCQ99643 169 aaPredicted RBP3.81□□□□□ -1.8
CD44-202ENST00000278385 TMEM59Q9BXS4 323 aa3.81□□□□□ -1.8
CD44-202ENST00000278385 ARL6Q9H0F7 186 aa3.81□□□□□ -1.8
CD44-202ENST00000278385 RBM38Q9H0Z9 239 aaKnown RBP3.81□□□□□ -1.8
CD44-202ENST00000278385 TLNRD1Q9H1K6 362 aa3.81□□□□□ -1.8
CD44-202ENST00000278385 OR51B5Q9H339 312 aa3.81□□□□□ -1.8
CD44-202ENST00000278385 C6orf106Q9H6K1 298 aaPredicted RBP3.81□□□□□ -1.8
CD44-202ENST00000278385 CAB39LQ9H9S4 337 aa3.81□□□□□ -1.8
CD44-202ENST00000278385 Q9HAA7 133 aa3.81□□□□□ -1.8
CD44-202ENST00000278385 C19orf25Q9UFG5 118 aaPredicted RBP3.81□□□□□ -1.8
CD44-202ENST00000278385 ENOPH1Q9UHY7 261 aa3.81□□□□□ -1.8
CD44-202ENST00000278385 MGAT4AQ9UM21 535 aa3.81□□□□□ -1.8
CD44-202ENST00000278385 ACOT9Q9Y305 439 aa3.81□□□□□ -1.8
CD44-202ENST00000278385 OR2W1Q9Y3N9 320 aa3.81□□□□□ -1.8
CD44-202ENST00000278385 OR51B4Q9Y5P0 310 aa3.81□□□□□ -1.8
CD44-202ENST00000278385 KIF26AQ9ULI4 1882 aaPredicted RBP3.81□□□□□ -1.8
CD44-202ENST00000278385 PATJQ8NI35 1801 aa3.81□□□□□ -1.8
CD44-202ENST00000278385 ZFHX2Q9C0A1 2572 aaPredicted RBP3.8□□□□□ -1.8
CD44-202ENST00000278385 KIR2DS1A0A191URI9 304 aa3.8□□□□□ -1.8
CD44-202ENST00000278385 TMEM272A0A1B0GTI8 110 aa3.8□□□□□ -1.8
CD44-202ENST00000278385 hCG_38984A0A1B0GV85 526 aa3.8□□□□□ -1.8
CD44-202ENST00000278385 A0A1B0GVT2 93 aa3.8□□□□□ -1.8
CD44-202ENST00000278385 C10orf142B7Z368 130 aa3.8□□□□□ -1.8
CD44-202ENST00000278385 PRSS44E7EML9 344 aa3.8□□□□□ -1.8
CD44-202ENST00000278385 E9PAM4 449 aa3.8□□□□□ -1.8
CD44-202ENST00000278385 INPP4BO15327 924 aa3.8□□□□□ -1.8
CD44-202ENST00000278385 BIRC5O15392 142 aa3.8□□□□□ -1.8
CD44-202ENST00000278385 ENSAO43768 121 aaKnown RBP3.8□□□□□ -1.8
CD44-202ENST00000278385 PRKNO60260 465 aaPredicted RBP3.8□□□□□ -1.8
CD44-202ENST00000278385 CDC40O60508 579 aaKnown RBP eCLIP3.8□□□□□ -1.8
CD44-202ENST00000278385 IFNA2P01563 188 aa3.8□□□□□ -1.8
CD44-202ENST00000278385 IFNA16P05015 189 aa3.8□□□□□ -1.8
CD44-202ENST00000278385 C2P06681 752 aa3.8□□□□□ -1.8
CD44-202ENST00000278385 GUSBP08236 651 aa3.8□□□□□ -1.8
CD44-202ENST00000278385 CCDC166P0CW27 439 aa3.8□□□□□ -1.8
CD44-202ENST00000278385 IGFBP3P17936 291 aaPredicted RBP3.8□□□□□ -1.8
CD44-202ENST00000278385 EFNA1P20827 205 aaPredicted RBP3.8□□□□□ -1.8
CD44-202ENST00000278385 FGF9P31371 208 aaPredicted RBP3.8□□□□□ -1.8
CD44-202ENST00000278385 SLCO1A2P46721 670 aa3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms