RNA–Protein interactions for RNA: ENST00000272322.8

VPS54-201, Transcript of VPS54, GARP complex subunit, humanhuman

APPRIS P3 TSL 5 BASIC

Gene VPS54, Length 3,463 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS54-201ENST00000272322 EHFQ9NZC4 300 aa14.63□□□□□ -0.07
VPS54-201ENST00000272322 RFPL4AA6NLU0 287 aa14.63□□□□□ -0.07
VPS54-201ENST00000272322 RFPL4AL1F8VTS6 287 aa14.63□□□□□ -0.07
VPS54-201ENST00000272322 TPD52L2O43399 206 aaKnown RBP14.63□□□□□ -0.07
VPS54-201ENST00000272322 CCL2P13500 99 aa14.63□□□□□ -0.07
VPS54-201ENST00000272322 ZNF385CQ66K41 422 aaPredicted RBP14.63□□□□□ -0.07
VPS54-201ENST00000272322 THAP6Q8TBB0 222 aa14.63□□□□□ -0.07
VPS54-201ENST00000272322 SCARB1Q8WTV0 552 aa14.63□□□□□ -0.07
VPS54-201ENST00000272322 PHB2Q99623 299 aa14.63□□□□□ -0.07
VPS54-201ENST00000272322 CDX2Q99626 313 aaPredicted RBP14.63□□□□□ -0.07
VPS54-201ENST00000272322 ROS1P08922 2347 aa14.63□□□□□ -0.07
VPS54-201ENST00000272322 DCHS1Q96JQ0 3298 aa14.63□□□□□ -0.07
VPS54-201ENST00000272322 LCATP04180 440 aa14.62□□□□□ -0.07
VPS54-201ENST00000272322 WIPI1Q5MNZ9 446 aaPredicted RBP14.62□□□□□ -0.07
VPS54-201ENST00000272322 C5orf24Q7Z6I8 188 aa14.62□□□□□ -0.07
VPS54-201ENST00000272322 VASH2Q86V25 355 aa14.62□□□□□ -0.07
VPS54-201ENST00000272322 TMEM17Q86X19 198 aa14.62□□□□□ -0.07
VPS54-201ENST00000272322 OR5M8Q8NGP6 311 aa14.62□□□□□ -0.07
VPS54-201ENST00000272322 TOMM40LQ969M1 308 aa14.62□□□□□ -0.07
VPS54-201ENST00000272322 FBXW5Q969U6 566 aa14.62□□□□□ -0.07
VPS54-201ENST00000272322 LYZL4Q96KX0 146 aa14.62□□□□□ -0.07
VPS54-201ENST00000272322 TMEM231Q9H6L2 316 aa14.62□□□□□ -0.07
VPS54-201ENST00000272322 CRLF2Q9HC73 371 aa14.62□□□□□ -0.07
VPS54-201ENST00000272322 DOCK10Q96BY6 2186 aa14.62□□□□□ -0.07
VPS54-201ENST00000272322 C9J4A7 227 aa14.62□□□□□ -0.07
VPS54-201ENST00000272322 SLC33A1O00400 549 aaPredicted RBP14.62□□□□□ -0.07
VPS54-201ENST00000272322 NTF4P34130 210 aa14.62□□□□□ -0.07
VPS54-201ENST00000272322 RAB12Q6IQ22 244 aa14.62□□□□□ -0.07
VPS54-201ENST00000272322 RGS7BPQ6MZT1 257 aaPredicted RBP14.62□□□□□ -0.07
VPS54-201ENST00000272322 ZNF774Q6NX45 483 aa14.62□□□□□ -0.07
VPS54-201ENST00000272322 DHRS9Q9BPW9 319 aa14.62□□□□□ -0.07
VPS54-201ENST00000272322 OR51B6Q9H340 312 aa14.62□□□□□ -0.07
VPS54-201ENST00000272322 SLC17A5Q9NRA2 495 aa14.62□□□□□ -0.07
VPS54-201ENST00000272322 CSAG2Q9Y5P2 127 aa14.62□□□□□ -0.07
VPS54-201ENST00000272322 IGKV1D-8A0A087WSZ0 117 aa14.62□□□□□ -0.07
VPS54-201ENST00000272322 H3BUI4 141 aa14.62□□□□□ -0.07
VPS54-201ENST00000272322 CXCL13O43927 109 aa14.62□□□□□ -0.07
VPS54-201ENST00000272322 SLC25A47Q6Q0C1 308 aa14.62□□□□□ -0.07
VPS54-201ENST00000272322 DEGS2Q6QHC5 323 aa14.62□□□□□ -0.07
VPS54-201ENST00000272322 LYG2Q86SG7 212 aa14.62□□□□□ -0.07
VPS54-201ENST00000272322 TMEM185AQ8NFB2 350 aa14.62□□□□□ -0.07
VPS54-201ENST00000272322 ANGPTL6Q8NI99 470 aa14.62□□□□□ -0.07
VPS54-201ENST00000272322 FOXRED1Q96CU9 486 aaPredicted RBP14.62□□□□□ -0.07
VPS54-201ENST00000272322 UTP23Q9BRU9 249 aaKnown RBP14.62□□□□□ -0.07
VPS54-201ENST00000272322 SRXN1Q9BYN0 137 aa14.62□□□□□ -0.07
VPS54-201ENST00000272322 SCPEP1Q9HB40 452 aa14.62□□□□□ -0.07
VPS54-201ENST00000272322 SLC39A1Q9NY26 324 aa14.62□□□□□ -0.07
VPS54-201ENST00000272322 MGMTP16455 207 aa14.61□□□□□ -0.07
VPS54-201ENST00000272322 FXYD4P59646 89 aa14.61□□□□□ -0.07
VPS54-201ENST00000272322 PCK2Q16822 640 aa14.61□□□□□ -0.07
VPS54-201ENST00000272322 AKIRIN2Q53H80 203 aa14.61□□□□□ -0.07
VPS54-201ENST00000272322 INO80EQ8NBZ0 244 aaPredicted RBP14.61□□□□□ -0.07
VPS54-201ENST00000272322 OR5H2Q8NGV7 314 aa14.61□□□□□ -0.07
VPS54-201ENST00000272322 OR1S1Q8NH92 325 aa14.61□□□□□ -0.07
VPS54-201ENST00000272322 ELP5Q8TE02 316 aa14.61□□□□□ -0.07
VPS54-201ENST00000272322 SEMA5BQ9P283 1151 aa14.61□□□□□ -0.07
VPS54-201ENST00000272322 EFSO43281 561 aa14.61□□□□□ -0.07
VPS54-201ENST00000272322 TCN2P20062 427 aa14.61□□□□□ -0.07
VPS54-201ENST00000272322 CASRP41180 1078 aa14.61□□□□□ -0.07
VPS54-201ENST00000272322 C11orf87Q6NUJ2 197 aa14.61□□□□□ -0.07
VPS54-201ENST00000272322 AGBL5Q8NDL9 886 aa14.61□□□□□ -0.07
VPS54-201ENST00000272322 OR6X1Q8NH79 312 aa14.61□□□□□ -0.07
VPS54-201ENST00000272322 ADAT1Q9BUB4 502 aaKnown RBP14.61□□□□□ -0.07
VPS54-201ENST00000272322 CHMP1AQ9HD42 196 aaPredicted RBP14.61□□□□□ -0.07
VPS54-201ENST00000272322 ASF1BQ9NVP2 202 aa14.61□□□□□ -0.07
VPS54-201ENST00000272322 COLQQ9Y215 455 aaPredicted RBP14.61□□□□□ -0.07
VPS54-201ENST00000272322 M0R135 149 aa14.61□□□□□ -0.07
VPS54-201ENST00000272322 AGPAT2O15120 278 aa14.61□□□□□ -0.07
VPS54-201ENST00000272322 SCGB1D2O95969 90 aa14.61□□□□□ -0.07
VPS54-201ENST00000272322 ZBTB25P24278 435 aa14.61□□□□□ -0.07
VPS54-201ENST00000272322 SSR4P51571 173 aa14.61□□□□□ -0.07
VPS54-201ENST00000272322 MTCP1P56278 107 aa14.61□□□□□ -0.07
VPS54-201ENST00000272322 SCAND1P57086 179 aa14.61□□□□□ -0.07
VPS54-201ENST00000272322 SP6Q3SY56 376 aa14.61□□□□□ -0.07
VPS54-201ENST00000272322 CDH26Q8IXH8 852 aa14.61□□□□□ -0.07
VPS54-201ENST00000272322 PAQR8Q8TEZ7 354 aa14.61□□□□□ -0.07
VPS54-201ENST00000272322 ZNF799Q96GE5 643 aa14.61□□□□□ -0.07
VPS54-201ENST00000272322 ZNF845Q96IR2 970 aaPredicted RBP14.61□□□□□ -0.07
VPS54-201ENST00000272322 SMIM3Q9BZL3 60 aa14.61□□□□□ -0.07
VPS54-201ENST00000272322 PNRC2Q9NPJ4 139 aaKnown RBP14.61□□□□□ -0.07
VPS54-201ENST00000272322 SESN1Q9Y6P5 492 aa14.61□□□□□ -0.07
VPS54-201ENST00000272322 AQP7P3A6NL99 342 aa14.6□□□□□ -0.07
VPS54-201ENST00000272322 ZIC3O60481 467 aa14.6□□□□□ -0.07
VPS54-201ENST00000272322 KLF7O75840 302 aaPredicted RBP14.6□□□□□ -0.07
VPS54-201ENST00000272322 HIST1H1DP16402 221 aaKnown RBP14.6□□□□□ -0.07
VPS54-201ENST00000272322 SLC35A1P78382 337 aa14.6□□□□□ -0.07
VPS54-201ENST00000272322 CLVS2Q5SYC1 327 aa14.6□□□□□ -0.07
VPS54-201ENST00000272322 MRPL14Q6P1L8 145 aaKnown RBP14.6□□□□□ -0.07
VPS54-201ENST00000272322 FBXO17Q96EF6 278 aa14.6□□□□□ -0.07
VPS54-201ENST00000272322 PCED1AQ9H1Q7 454 aa14.6□□□□□ -0.07
VPS54-201ENST00000272322 CPAMD8Q8IZJ3 1885 aa14.6□□□□□ -0.07
VPS54-201ENST00000272322 IGHV3-64DA0A0J9YX35 117 aa14.6□□□□□ -0.07
VPS54-201ENST00000272322 BPNT1O95861 308 aa14.6□□□□□ -0.07
VPS54-201ENST00000272322 MSR1P21757 451 aa14.6□□□□□ -0.07
VPS54-201ENST00000272322 MSX1P28360 303 aa14.6□□□□□ -0.07
VPS54-201ENST00000272322 QRFPP83859 136 aa14.6□□□□□ -0.07
VPS54-201ENST00000272322 MEF2DQ14814 521 aa14.6□□□□□ -0.07
VPS54-201ENST00000272322 NAXDQ8IW45 347 aa14.6□□□□□ -0.07
VPS54-201ENST00000272322 PNLDC1Q8NA58 520 aaKnown RBP14.6□□□□□ -0.07
VPS54-201ENST00000272322 OR51F2Q8NH61 342 aa14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms