RNA–Protein interactions for RNA: ENST00000269318.9

CCDC40-201, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2 BASIC

Gene CCDC40, Length 1,970 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-201ENST00000269318 TMEM229BQ8NBD8 167 aa14.47□□□□□ -0.09
CCDC40-201ENST00000269318 KCNG3Q8TAE7 436 aa14.47□□□□□ -0.09
CCDC40-201ENST00000269318 GPER1Q99527 375 aa14.47□□□□□ -0.09
CCDC40-201ENST00000269318 NICN1Q9BSH3 213 aa14.47□□□□□ -0.09
CCDC40-201ENST00000269318 ING3Q9NXR8 418 aa14.47□□□□□ -0.09
CCDC40-201ENST00000269318 ZNF391Q9UJN7 358 aa14.47□□□□□ -0.09
CCDC40-201ENST00000269318 KLK13Q9UKR3 277 aa14.47□□□□□ -0.09
CCDC40-201ENST00000269318 A0A096LPE4 126 aa14.47□□□□□ -0.09
CCDC40-201ENST00000269318 A0A1W2PPZ6 126 aa14.47□□□□□ -0.09
CCDC40-201ENST00000269318 ARPC1BO15143 372 aaKnown RBP14.47□□□□□ -0.09
CCDC40-201ENST00000269318 PRAF2O60831 178 aa14.47□□□□□ -0.09
CCDC40-201ENST00000269318 ZNF24P17028 368 aa14.47□□□□□ -0.09
CCDC40-201ENST00000269318 STOMP27105 288 aa14.47□□□□□ -0.09
CCDC40-201ENST00000269318 AGTR1P30556 359 aa14.47□□□□□ -0.09
CCDC40-201ENST00000269318 PTGFRP43088 359 aa14.47□□□□□ -0.09
CCDC40-201ENST00000269318 TAS2R19P59542 299 aa14.47□□□□□ -0.09
CCDC40-201ENST00000269318 STEAP1BQ6NZ63 245 aa14.47□□□□□ -0.09
CCDC40-201ENST00000269318 NOXA1Q86UR1 476 aa14.47□□□□□ -0.09
CCDC40-201ENST00000269318 OR11H7Q8NGC8 314 aa14.47□□□□□ -0.09
CCDC40-201ENST00000269318 OR10R2Q8NGX6 335 aa14.47□□□□□ -0.09
CCDC40-201ENST00000269318 NPRL2Q8WTW4 380 aa14.47□□□□□ -0.09
CCDC40-201ENST00000269318 MS4A3Q96HJ5 214 aa14.47□□□□□ -0.09
CCDC40-201ENST00000269318 RGCCQ9H4X1 137 aa14.47□□□□□ -0.09
CCDC40-201ENST00000269318 UPB1Q9UBR1 384 aa14.47□□□□□ -0.09
CCDC40-201ENST00000269318 ZNF107Q9UII5 783 aaPredicted RBP14.47□□□□□ -0.09
CCDC40-201ENST00000269318 ZNF175Q9Y473 711 aa14.47□□□□□ -0.09
CCDC40-201ENST00000269318 LOC400499M0QZD8 3231 aa14.46□□□□□ -0.09
CCDC40-201ENST00000269318 ZFHX2Q9C0A1 2572 aaPredicted RBP14.46□□□□□ -0.09
CCDC40-201ENST00000269318 TRAV17A0A0B4J275 112 aa14.46□□□□□ -0.09
CCDC40-201ENST00000269318 A0A1B0GUH1 482 aa14.46□□□□□ -0.09
CCDC40-201ENST00000269318 A0A1W2PP11 408 aa14.46□□□□□ -0.09
CCDC40-201ENST00000269318 ZNF503-AS2A6NEH8 195 aa14.46□□□□□ -0.09
CCDC40-201ENST00000269318 SLC22A20A6NK97 555 aa14.46□□□□□ -0.09
CCDC40-201ENST00000269318 HPXP02790 462 aa14.46□□□□□ -0.09
CCDC40-201ENST00000269318 FCER2P06734 321 aa14.46□□□□□ -0.09
CCDC40-201ENST00000269318 CHRM2P08172 466 aa14.46□□□□□ -0.09
CCDC40-201ENST00000269318 RIPPLY1Q0D2K3 151 aa14.46□□□□□ -0.09
CCDC40-201ENST00000269318 FAPQ12884 760 aa14.46□□□□□ -0.09
CCDC40-201ENST00000269318 CDNFQ49AH0 187 aa14.46□□□□□ -0.09
CCDC40-201ENST00000269318 COLCA1Q6ZS62 124 aa14.46□□□□□ -0.09
CCDC40-201ENST00000269318 C1QL2Q7Z5L3 287 aa14.46□□□□□ -0.09
CCDC40-201ENST00000269318 FGD2Q7Z6J4 655 aa14.46□□□□□ -0.09
CCDC40-201ENST00000269318 ZNF100Q8IYN0 542 aa14.46□□□□□ -0.09
CCDC40-201ENST00000269318 PNLDC1Q8NA58 520 aaKnown RBP14.46□□□□□ -0.09
CCDC40-201ENST00000269318 BEST4Q8NFU0 473 aa14.46□□□□□ -0.09
CCDC40-201ENST00000269318 DVL3Q92997 716 aaPredicted RBP14.46□□□□□ -0.09
CCDC40-201ENST00000269318 C1QTNF5Q9BXJ0 243 aa14.46□□□□□ -0.09
CCDC40-201ENST00000269318 PRDM14Q9GZV8 571 aa14.46□□□□□ -0.09
CCDC40-201ENST00000269318 BEX1Q9HBH7 125 aa14.46□□□□□ -0.09
CCDC40-201ENST00000269318 GP6Q9HCN6 339 aa14.46□□□□□ -0.09
CCDC40-201ENST00000269318 GHRLQ9UBU3 117 aa14.46□□□□□ -0.09
CCDC40-201ENST00000269318 KCNMB2Q9Y691 235 aa14.46□□□□□ -0.09
CCDC40-201ENST00000269318 FREM1Q5H8C1 2179 aa14.46□□□□□ -0.09
CCDC40-201ENST00000269318 MUC6Q6W4X9 2439 aa14.46□□□□□ -0.09
CCDC40-201ENST00000269318 hCG_38984A0A1B0GV85 526 aa14.45□□□□□ -0.1
CCDC40-201ENST00000269318 MPIG6BO95866 241 aa14.45□□□□□ -0.1
CCDC40-201ENST00000269318 HLA-HP01893 362 aa14.45□□□□□ -0.1
CCDC40-201ENST00000269318 EDN3P14138 238 aa14.45□□□□□ -0.1
CCDC40-201ENST00000269318 MAB21L1Q13394 359 aa14.45□□□□□ -0.1
CCDC40-201ENST00000269318 RBMS2Q15434 407 aaKnown RBP14.45□□□□□ -0.1
CCDC40-201ENST00000269318 TMEM42Q69YG0 159 aa14.45□□□□□ -0.1
CCDC40-201ENST00000269318 ZNF782Q6ZMW2 699 aaPredicted RBP14.45□□□□□ -0.1
CCDC40-201ENST00000269318 RTN4RL2Q86UN3 420 aa14.45□□□□□ -0.1
CCDC40-201ENST00000269318 LIX1LQ8IVB5 337 aa14.45□□□□□ -0.1
CCDC40-201ENST00000269318 PIAS4Q8N2W9 510 aaPredicted RBP14.45□□□□□ -0.1
CCDC40-201ENST00000269318 CHST4Q8NCG5 386 aa14.45□□□□□ -0.1
CCDC40-201ENST00000269318 OR5D18Q8NGL1 313 aa14.45□□□□□ -0.1
CCDC40-201ENST00000269318 OR8S1Q8NH09 359 aa14.45□□□□□ -0.1
CCDC40-201ENST00000269318 TMEM59Q9BXS4 323 aa14.45□□□□□ -0.1
CCDC40-201ENST00000269318 PRSS50Q9UI38 385 aa14.45□□□□□ -0.1
CCDC40-201ENST00000269318 LOC100509620A0A075B734 347 aa14.45□□□□□ -0.1
CCDC40-201ENST00000269318 EFSO43281 561 aa14.45□□□□□ -0.1
CCDC40-201ENST00000269318 CD74P04233 296 aa14.45□□□□□ -0.1
CCDC40-201ENST00000269318 FCGR2AP12318 317 aa14.45□□□□□ -0.1
CCDC40-201ENST00000269318 GNB3P16520 340 aa14.45□□□□□ -0.1
CCDC40-201ENST00000269318 FAM3AP98173 230 aa14.45□□□□□ -0.1
CCDC40-201ENST00000269318 ZNF92Q03936 586 aa14.45□□□□□ -0.1
CCDC40-201ENST00000269318 FJX1Q86VR8 437 aa14.45□□□□□ -0.1
CCDC40-201ENST00000269318 OR51S1Q8NGJ8 323 aa14.45□□□□□ -0.1
CCDC40-201ENST00000269318 PIGTQ969N2 578 aa14.45□□□□□ -0.1
CCDC40-201ENST00000269318 SPSB4Q96A44 273 aa14.45□□□□□ -0.1
CCDC40-201ENST00000269318 SPSB1Q96BD6 273 aa14.45□□□□□ -0.1
CCDC40-201ENST00000269318 TRAF4Q9BUZ4 470 aaPredicted RBP14.45□□□□□ -0.1
CCDC40-201ENST00000269318 SELENOIQ9C0D9 397 aa14.45□□□□□ -0.1
CCDC40-201ENST00000269318 BANF2Q9H503 90 aa14.45□□□□□ -0.1
CCDC40-201ENST00000269318 GPR173Q9NS66 373 aa14.45□□□□□ -0.1
CCDC40-201ENST00000269318 C1QBP02746 253 aa14.44□□□□□ -0.1
CCDC40-201ENST00000269318 COX5BP10606 129 aa14.44□□□□□ -0.1
CCDC40-201ENST00000269318 RAD52P43351 418 aa14.44□□□□□ -0.1
CCDC40-201ENST00000269318 PRSS12P56730 875 aa14.44□□□□□ -0.1
CCDC40-201ENST00000269318 OR8B8Q15620 311 aa14.44□□□□□ -0.1
CCDC40-201ENST00000269318 SLC22A6Q4U2R8 563 aa14.44□□□□□ -0.1
CCDC40-201ENST00000269318 PLAC9Q5JTB6 97 aa14.44□□□□□ -0.1
CCDC40-201ENST00000269318 GLDNQ6ZMI3 551 aaPredicted RBP14.44□□□□□ -0.1
CCDC40-201ENST00000269318 ASCL5Q7RTU5 278 aa14.44□□□□□ -0.1
CCDC40-201ENST00000269318 MED30Q96HR3 178 aa14.44□□□□□ -0.1
CCDC40-201ENST00000269318 NPDC1Q9NQX5 325 aaPredicted RBP14.44□□□□□ -0.1
CCDC40-201ENST00000269318 RIF1Q5UIP0 2472 aaKnown RBP14.44□□□□□ -0.1
CCDC40-201ENST00000269318 PYCARD-AS1I3L0S3 204 aa14.43□□□□□ -0.1
CCDC40-201ENST00000269318 SOCS1O15524 211 aa14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms