RNA–Protein interactions for RNA: ENST00000269137.11

SS18-201, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SS18, Length 1,836 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-201ENST00000269137 BAIAP2L2Q6UXY1 529 aa12.2□□□□□ -0.46
SS18-201ENST00000269137 KRT74Q7RTS7 529 aa12.2□□□□□ -0.46
SS18-201ENST00000269137 MRGPRGQ86SM5 289 aa12.2□□□□□ -0.46
SS18-201ENST00000269137 CMTM4Q8IZR5 234 aa12.2□□□□□ -0.46
SS18-201ENST00000269137 OR51D1Q8NGF3 324 aa12.2□□□□□ -0.46
SS18-201ENST00000269137 OR5L1Q8NGL2 311 aa12.2□□□□□ -0.46
SS18-201ENST00000269137 VKORC1Q9BQB6 163 aa12.2□□□□□ -0.46
SS18-201ENST00000269137 CNTD2Q9H8S5 307 aa12.2□□□□□ -0.46
SS18-201ENST00000269137 ABCB10Q9NRK6 738 aa12.2□□□□□ -0.46
SS18-201ENST00000269137 STARD10Q9Y365 291 aa12.2□□□□□ -0.46
SS18-201ENST00000269137 PRR14LQ5THK1 2151 aa12.2□□□□□ -0.46
SS18-201ENST00000269137 NGFP01138 241 aa12.19□□□□□ -0.46
SS18-201ENST00000269137 IGLV1-44P01699 117 aa12.19□□□□□ -0.46
SS18-201ENST00000269137 CELA3BP08861 270 aa12.19□□□□□ -0.46
SS18-201ENST00000269137 IL32P24001 234 aa12.19□□□□□ -0.46
SS18-201ENST00000269137 ZNF93P35789 620 aaPredicted RBP12.19□□□□□ -0.46
SS18-201ENST00000269137 IL18Q14116 193 aa12.19□□□□□ -0.46
SS18-201ENST00000269137 GK2Q14410 553 aaPredicted RBP12.19□□□□□ -0.46
SS18-201ENST00000269137 UBE2V2Q15819 145 aa12.19□□□□□ -0.46
SS18-201ENST00000269137 PYDC2Q56P42 97 aa12.19□□□□□ -0.46
SS18-201ENST00000269137 TIMM23BQ5SRD1 257 aa12.19□□□□□ -0.46
SS18-201ENST00000269137 TMEM211Q6ICI0 200 aa12.19□□□□□ -0.46
SS18-201ENST00000269137 LYSMD2Q8IV50 215 aa12.19□□□□□ -0.46
SS18-201ENST00000269137 HAVCR1Q96D42 359 aa12.19□□□□□ -0.46
SS18-201ENST00000269137 DMRTA2Q96SC8 542 aa12.19□□□□□ -0.46
SS18-201ENST00000269137 LDLRAD4O15165 306 aa12.18□□□□□ -0.46
SS18-201ENST00000269137 TPPPO94811 219 aa12.18□□□□□ -0.46
SS18-201ENST00000269137 HNRNPCP07910 306 aaKnown RBP eCLIP12.18□□□□□ -0.46
SS18-201ENST00000269137 ARSBP15848 533 aa12.18□□□□□ -0.46
SS18-201ENST00000269137 BMP5P22003 454 aa12.18□□□□□ -0.46
SS18-201ENST00000269137 CLVS2Q5SYC1 327 aa12.18□□□□□ -0.46
SS18-201ENST00000269137 STEAP3Q658P3 488 aa12.18□□□□□ -0.46
SS18-201ENST00000269137 PYHIN1Q6K0P9 492 aa12.18□□□□□ -0.46
SS18-201ENST00000269137 MYPOPQ86VE0 399 aaPredicted RBP12.18□□□□□ -0.46
SS18-201ENST00000269137 ZNF101Q8IZC7 436 aa12.18□□□□□ -0.46
SS18-201ENST00000269137 OR4D6Q8NGJ1 314 aa12.18□□□□□ -0.46
SS18-201ENST00000269137 SYNPRQ8TBG9 265 aa12.18□□□□□ -0.46
SS18-201ENST00000269137 PTX4Q96A99 478 aa12.18□□□□□ -0.46
SS18-201ENST00000269137 SPSB1Q96BD6 273 aa12.18□□□□□ -0.46
SS18-201ENST00000269137 S100A16Q96FQ6 103 aaKnown RBP12.18□□□□□ -0.46
SS18-201ENST00000269137 CDH20Q9HBT6 801 aa12.18□□□□□ -0.46
SS18-201ENST00000269137 EIF3KQ9UBQ5 218 aaKnown RBP12.18□□□□□ -0.46
SS18-201ENST00000269137 SLC25A15Q9Y619 301 aa12.18□□□□□ -0.46
SS18-201ENST00000269137 A0A0G2JMP0 313 aa12.18□□□□□ -0.46
SS18-201ENST00000269137 A0A0X1KG70 313 aa12.18□□□□□ -0.46
SS18-201ENST00000269137 ZNF816-ZNF321PA0A0X1KG74 233 aa12.18□□□□□ -0.46
SS18-201ENST00000269137 GMDSO60547 372 aa12.18□□□□□ -0.46
SS18-201ENST00000269137 HCKP08631 526 aa12.18□□□□□ -0.46
SS18-201ENST00000269137 AZGP1P25311 298 aaKnown RBP12.18□□□□□ -0.46
SS18-201ENST00000269137 CASP6P55212 293 aa12.18□□□□□ -0.46
SS18-201ENST00000269137 LY6DQ14210 128 aa12.18□□□□□ -0.46
SS18-201ENST00000269137 BAK1Q16611 211 aa12.18□□□□□ -0.46
SS18-201ENST00000269137 RFPL4BQ6ZWI9 263 aa12.18□□□□□ -0.46
SS18-201ENST00000269137 MRPL21Q7Z2W9 205 aaKnown RBP12.18□□□□□ -0.46
SS18-201ENST00000269137 OR8H2Q8N162 312 aa12.18□□□□□ -0.46
SS18-201ENST00000269137 OR4M2Q8NGB6 313 aa12.18□□□□□ -0.46
SS18-201ENST00000269137 WBP1Q96G27 269 aa12.18□□□□□ -0.46
SS18-201ENST00000269137 TECTBQ96PL2 329 aa12.18□□□□□ -0.46
SS18-201ENST00000269137 NKX3-1Q99801 234 aaPredicted RBP12.18□□□□□ -0.46
SS18-201ENST00000269137 USB1Q9BQ65 265 aaKnown RBP12.18□□□□□ -0.46
SS18-201ENST00000269137 NEK6Q9HC98 313 aa12.18□□□□□ -0.46
SS18-201ENST00000269137 ELOVL5Q9NYP7 299 aa12.18□□□□□ -0.46
SS18-201ENST00000269137 JKAMPQ9P055 326 aa12.18□□□□□ -0.46
SS18-201ENST00000269137 FBLN5Q9UBX5 448 aa12.18□□□□□ -0.46
SS18-201ENST00000269137 NBASA2RRP1 2371 aa12.17□□□□□ -0.46
SS18-201ENST00000269137 TMEM272A0A1B0GTI8 110 aa12.17□□□□□ -0.46
SS18-201ENST00000269137 AGFG2O95081 481 aa12.17□□□□□ -0.46
SS18-201ENST00000269137 BPNT1O95861 308 aa12.17□□□□□ -0.46
SS18-201ENST00000269137 CSF3P09919 207 aa12.17□□□□□ -0.46
SS18-201ENST00000269137 IL7P13232 177 aa12.17□□□□□ -0.46
SS18-201ENST00000269137 PRKACBP22694 351 aa12.17□□□□□ -0.46
SS18-201ENST00000269137 MNDAP41218 407 aa12.17□□□□□ -0.46
SS18-201ENST00000269137 CA7P43166 264 aa12.17□□□□□ -0.46
SS18-201ENST00000269137 CNN3Q15417 329 aaKnown RBP12.17□□□□□ -0.46
SS18-201ENST00000269137 C3orf36Q3SXR2 165 aa12.17□□□□□ -0.46
SS18-201ENST00000269137 PCSK4Q6UW60 755 aa12.17□□□□□ -0.46
SS18-201ENST00000269137 Q8N402 240 aa12.17□□□□□ -0.46
SS18-201ENST00000269137 CSNK2A3Q8NEV1 391 aa12.17□□□□□ -0.46
SS18-201ENST00000269137 STEAP2Q8NFT2 490 aa12.17□□□□□ -0.46
SS18-201ENST00000269137 UBASH3BQ8TF42 649 aa12.17□□□□□ -0.46
SS18-201ENST00000269137 RND1Q92730 232 aa12.17□□□□□ -0.46
SS18-201ENST00000269137 PIGTQ969N2 578 aa12.17□□□□□ -0.46
SS18-201ENST00000269137 C14orf119Q9NWQ9 140 aa12.17□□□□□ -0.46
SS18-201ENST00000269137 PTTG3PQ9NZH4 202 aa12.17□□□□□ -0.46
SS18-201ENST00000269137 SH3BGRL2Q9UJC5 107 aa12.17□□□□□ -0.46
SS18-201ENST00000269137 MEMO1Q9Y316 297 aa12.17□□□□□ -0.46
SS18-201ENST00000269137 EEF1E1-BLOC1S5C9J1V9 151 aa12.16□□□□□ -0.46
SS18-201ENST00000269137 EEF1E1O43324 174 aaKnown RBP12.16□□□□□ -0.46
SS18-201ENST00000269137 SMPD2O60906 423 aa12.16□□□□□ -0.46
SS18-201ENST00000269137 NRASP01111 189 aa12.16□□□□□ -0.46
SS18-201ENST00000269137 ZNF35P13682 527 aa12.16□□□□□ -0.46
SS18-201ENST00000269137 RAB6AP20340 208 aa12.16□□□□□ -0.46
SS18-201ENST00000269137 ALDH3B1P43353 468 aa12.16□□□□□ -0.46
SS18-201ENST00000269137 PITPNAQ00169 270 aa12.16□□□□□ -0.46
SS18-201ENST00000269137 PLA2G7Q13093 441 aa12.16□□□□□ -0.46
SS18-201ENST00000269137 MADCAM1Q13477 382 aa12.16□□□□□ -0.46
SS18-201ENST00000269137 KISS1Q15726 138 aa12.16□□□□□ -0.46
SS18-201ENST00000269137 CRIP3Q6Q6R5 217 aa12.16□□□□□ -0.46
SS18-201ENST00000269137 ANGPTL5Q86XS5 388 aa12.16□□□□□ -0.46
SS18-201ENST00000269137 OR56B2PQ8NGI1 322 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms