RNA–Protein interactions for RNA: ENST00000265896.9

SQLE-201, Transcript of squalene epoxidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SQLE, Length 2,961 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-201ENST00000265896 LAP3P28838 519 aa14.83□□□□□ -0.04
SQLE-201ENST00000265896 CX3CR1P49238 355 aa14.83□□□□□ -0.04
SQLE-201ENST00000265896 FHITP49789 147 aa14.83□□□□□ -0.04
SQLE-201ENST00000265896 MMP16P51512 607 aa14.83□□□□□ -0.04
SQLE-201ENST00000265896 APCDD1LQ8NCL9 501 aa14.83□□□□□ -0.04
SQLE-201ENST00000265896 C12orf57Q99622 126 aa14.83□□□□□ -0.04
SQLE-201ENST00000265896 METTL7AQ9H8H3 244 aa14.83□□□□□ -0.04
SQLE-201ENST00000265896 SLC2A4RGQ9NR83 387 aa14.83□□□□□ -0.04
SQLE-201ENST00000265896 MMACHCQ9Y4U1 282 aa14.83□□□□□ -0.04
SQLE-201ENST00000265896 H3BMH7 237 aa14.82□□□□□ -0.04
SQLE-201ENST00000265896 LPAR6P43657 344 aa14.82□□□□□ -0.04
SQLE-201ENST00000265896 DAP3P51398 398 aaKnown RBP14.82□□□□□ -0.04
SQLE-201ENST00000265896 ZNF345Q14585 488 aa14.82□□□□□ -0.04
SQLE-201ENST00000265896 DNM1P34Q6PK57 102 aa14.82□□□□□ -0.04
SQLE-201ENST00000265896 SVBPQ8N300 66 aa14.82□□□□□ -0.04
SQLE-201ENST00000265896 NKAIN3Q8N8D7 197 aa14.82□□□□□ -0.04
SQLE-201ENST00000265896 PPP4R1LQ9P1A2 415 aa14.82□□□□□ -0.04
SQLE-201ENST00000265896 LOC390937A0A1W2PQ73 354 aa14.82□□□□□ -0.04
SQLE-201ENST00000265896 OR5H15A6NDH6 313 aa14.82□□□□□ -0.04
SQLE-201ENST00000265896 CCDC85CA6NKD9 419 aa14.82□□□□□ -0.04
SQLE-201ENST00000265896 C1QL1O75973 258 aa14.82□□□□□ -0.04
SQLE-201ENST00000265896 IL2RAP01589 272 aa14.82□□□□□ -0.04
SQLE-201ENST00000265896 CRYBA1P05813 215 aa14.82□□□□□ -0.04
SQLE-201ENST00000265896 RIPPLY1Q0D2K3 151 aa14.82□□□□□ -0.04
SQLE-201ENST00000265896 PDZK1IP1Q13113 114 aa14.82□□□□□ -0.04
SQLE-201ENST00000265896 HOGA1Q86XE5 327 aa14.82□□□□□ -0.04
SQLE-201ENST00000265896 ISOC2Q96AB3 205 aa14.82□□□□□ -0.04
SQLE-201ENST00000265896 BSCL2Q96G97 398 aaPredicted RBP14.82□□□□□ -0.04
SQLE-201ENST00000265896 CDCA3Q99618 268 aaPredicted RBP14.82□□□□□ -0.04
SQLE-201ENST00000265896 RTBDNQ9BSG5 229 aaPredicted RBP14.82□□□□□ -0.04
SQLE-201ENST00000265896 RFNGQ9Y644 331 aa14.82□□□□□ -0.04
SQLE-201ENST00000265896 DOCK7Q96N67 2140 aa14.82□□□□□ -0.04
SQLE-201ENST00000265896 TMEM131Q92545 1883 aa14.82□□□□□ -0.04
SQLE-201ENST00000265896 CCDC163A0A0D9SF12 145 aa14.82□□□□□ -0.04
SQLE-201ENST00000265896 TMEM127O75204 238 aa14.82□□□□□ -0.04
SQLE-201ENST00000265896 WDPCPO95876 746 aa14.82□□□□□ -0.04
SQLE-201ENST00000265896 ISG15P05161 165 aa14.82□□□□□ -0.04
SQLE-201ENST00000265896 PATE4P0C8F1 98 aa14.82□□□□□ -0.04
SQLE-201ENST00000265896 HIST1H1DP16402 221 aaKnown RBP14.82□□□□□ -0.04
SQLE-201ENST00000265896 SSBP1Q04837 148 aaKnown RBP14.82□□□□□ -0.04
SQLE-201ENST00000265896 HFEQ30201 348 aa14.82□□□□□ -0.04
SQLE-201ENST00000265896 OR2AE1Q8NHA4 323 aa14.82□□□□□ -0.04
SQLE-201ENST00000265896 TMEM234Q8WY98 164 aa14.82□□□□□ -0.04
SQLE-201ENST00000265896 CNTNAP3BQ96NU0 1288 aa14.82□□□□□ -0.04
SQLE-201ENST00000265896 WDR77Q9BQA1 342 aaPredicted RBP14.82□□□□□ -0.04
SQLE-201ENST00000265896 PRELID3BQ9Y3B1 194 aa14.82□□□□□ -0.04
SQLE-201ENST00000265896 LIPT2A6NK58 231 aa14.81□□□□□ -0.04
SQLE-201ENST00000265896 XRCC2O43543 280 aa14.81□□□□□ -0.04
SQLE-201ENST00000265896 FXYD4P59646 89 aa14.81□□□□□ -0.04
SQLE-201ENST00000265896 ACY1Q03154 408 aa14.81□□□□□ -0.04
SQLE-201ENST00000265896 TMEM128Q5BJH2 165 aa14.81□□□□□ -0.04
SQLE-201ENST00000265896 UEVLDQ8IX04 471 aa14.81□□□□□ -0.04
SQLE-201ENST00000265896 SEMA6DQ8NFY4 1073 aa14.81□□□□□ -0.04
SQLE-201ENST00000265896 ARL11Q969Q4 196 aa14.81□□□□□ -0.04
SQLE-201ENST00000265896 GPHA2Q96T91 129 aa14.81□□□□□ -0.04
SQLE-201ENST00000265896 FLVCR1Q9Y5Y0 555 aa14.81□□□□□ -0.04
SQLE-201ENST00000265896 ZNF407Q9C0G0 2248 aa14.81□□□□□ -0.04
SQLE-201ENST00000265896 EML6Q6ZMW3 1958 aa14.81□□□□□ -0.04
SQLE-201ENST00000265896 A0A1B0GX78 115 aa14.81□□□□□ -0.04
SQLE-201ENST00000265896 TMEM14DPA8MWL7 114 aa14.81□□□□□ -0.04
SQLE-201ENST00000265896 HEXBP07686 556 aa14.81□□□□□ -0.04
SQLE-201ENST00000265896 MELTFP08582 738 aa14.81□□□□□ -0.04
SQLE-201ENST00000265896 CCR5P51681 352 aa14.81□□□□□ -0.04
SQLE-201ENST00000265896 GABREP78334 506 aa14.81□□□□□ -0.04
SQLE-201ENST00000265896 LPCAT3Q6P1A2 487 aa14.81□□□□□ -0.04
SQLE-201ENST00000265896 RXFP4Q8TDU9 374 aa14.81□□□□□ -0.04
SQLE-201ENST00000265896 CRB3Q9BUF7 120 aa14.81□□□□□ -0.04
SQLE-201ENST00000265896 RHOFQ9HBH0 211 aa14.81□□□□□ -0.04
SQLE-201ENST00000265896 UQCC1Q9NVA1 299 aa14.81□□□□□ -0.04
SQLE-201ENST00000265896 DIRAS3O95661 229 aa14.8□□□□□ -0.04
SQLE-201ENST00000265896 BPNT1O95861 308 aa14.8□□□□□ -0.04
SQLE-201ENST00000265896 PPT1P50897 306 aa14.8□□□□□ -0.04
SQLE-201ENST00000265896 ZNF41P51814 821 aaPredicted RBP14.8□□□□□ -0.04
SQLE-201ENST00000265896 SMAD4Q13485 552 aaKnown RBP14.8□□□□□ -0.04
SQLE-201ENST00000265896 MST1LQ2TV78 715 aa14.8□□□□□ -0.04
SQLE-201ENST00000265896 OR10Z1Q8NGY1 313 aa14.8□□□□□ -0.04
SQLE-201ENST00000265896 RNF141Q8WVD5 230 aa14.8□□□□□ -0.04
SQLE-201ENST00000265896 THRSPQ92748 146 aa14.8□□□□□ -0.04
SQLE-201ENST00000265896 EDAQ92838 391 aa14.8□□□□□ -0.04
SQLE-201ENST00000265896 ZNF837Q96EG3 531 aaPredicted RBP14.8□□□□□ -0.04
SQLE-201ENST00000265896 AKR1E2Q96JD6 320 aa14.8□□□□□ -0.04
SQLE-201ENST00000265896 C1orf147Q96MC9 270 aaPredicted RBP14.8□□□□□ -0.04
SQLE-201ENST00000265896 ZNF98A6NK75 572 aa14.8□□□□□ -0.04
SQLE-201ENST00000265896 SPRY1O43609 319 aaPredicted RBP14.8□□□□□ -0.04
SQLE-201ENST00000265896 FCGR2AP12318 317 aa14.8□□□□□ -0.04
SQLE-201ENST00000265896 CLDN17P56750 224 aa14.8□□□□□ -0.04
SQLE-201ENST00000265896 CCDC36Q8IYA8 594 aa14.8□□□□□ -0.04
SQLE-201ENST00000265896 ZDHHC22Q8N966 263 aa14.8□□□□□ -0.04
SQLE-201ENST00000265896 PLA2G2EQ9NZK7 142 aa14.8□□□□□ -0.04
SQLE-201ENST00000265896 GPR132Q9UNW8 380 aa14.8□□□□□ -0.04
SQLE-201ENST00000265896 BLACEA4D250 179 aa14.79□□□□□ -0.04
SQLE-201ENST00000265896 A6NIZ1 184 aa14.79□□□□□ -0.04
SQLE-201ENST00000265896 HSPB2A8KAH6 182 aa14.79□□□□□ -0.04
SQLE-201ENST00000265896 FAM157CP0CG43 387 aa14.79□□□□□ -0.04
SQLE-201ENST00000265896 RAP1BP61224 184 aa14.79□□□□□ -0.04
SQLE-201ENST00000265896 RAP1AP62834 184 aa14.79□□□□□ -0.04
SQLE-201ENST00000265896 TOMM20Q15388 145 aa14.79□□□□□ -0.04
SQLE-201ENST00000265896 HSPB2Q16082 182 aa14.79□□□□□ -0.04
SQLE-201ENST00000265896 IAH1Q2TAA2 248 aaPredicted RBP14.79□□□□□ -0.04
SQLE-201ENST00000265896 AADACL3Q5VUY0 350 aa14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms