RNA–Protein interactions for RNA: ENST00000265810.8

PDLIM2-201, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 4,592 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-201ENST00000265810 VRK1Q99986 396 aaPredicted RBP12.75□□□□□ -0.37
PDLIM2-201ENST00000265810 FZR1Q9UM11 496 aa12.75□□□□□ -0.37
PDLIM2-201ENST00000265810 KANTRA0A1W2PQU2 76 aa12.75□□□□□ -0.37
PDLIM2-201ENST00000265810 H7C417 338 aa12.75□□□□□ -0.37
PDLIM2-201ENST00000265810 LYPD3O95274 346 aa12.75□□□□□ -0.37
PDLIM2-201ENST00000265810 LPLP06858 475 aa12.75□□□□□ -0.37
PDLIM2-201ENST00000265810 CSF3P09919 207 aa12.75□□□□□ -0.37
PDLIM2-201ENST00000265810 GNB3P16520 340 aa12.75□□□□□ -0.37
PDLIM2-201ENST00000265810 NKX2-5P52952 324 aaPredicted RBP12.75□□□□□ -0.37
PDLIM2-201ENST00000265810 LINC01590Q5TEZ4 76 aa12.75□□□□□ -0.37
PDLIM2-201ENST00000265810 FAM27BQ5VT28 67 aa12.75□□□□□ -0.37
PDLIM2-201ENST00000265810 ST6GALNAC2Q9UJ37 374 aa12.75□□□□□ -0.37
PDLIM2-201ENST00000265810 GOSR2O14653 212 aa12.74□□□□□ -0.37
PDLIM2-201ENST00000265810 TNFSF10P50591 281 aa12.74□□□□□ -0.37
PDLIM2-201ENST00000265810 ZNF81P51508 661 aa12.74□□□□□ -0.37
PDLIM2-201ENST00000265810 SUCLG1P53597 346 aaKnown RBP12.74□□□□□ -0.37
PDLIM2-201ENST00000265810 AGAP6Q5VW22 663 aa12.74□□□□□ -0.37
PDLIM2-201ENST00000265810 FJX1Q86VR8 437 aa12.74□□□□□ -0.37
PDLIM2-201ENST00000265810 CCDC36Q8IYA8 594 aa12.74□□□□□ -0.37
PDLIM2-201ENST00000265810 TRMT61AQ96FX7 289 aaKnown RBP12.74□□□□□ -0.37
PDLIM2-201ENST00000265810 KLHDC3Q9BQ90 382 aa12.74□□□□□ -0.37
PDLIM2-201ENST00000265810 SRRQ9GZT4 340 aa12.74□□□□□ -0.37
PDLIM2-201ENST00000265810 AUNIPQ9H7T9 357 aa12.74□□□□□ -0.37
PDLIM2-201ENST00000265810 ACKR4Q9NPB9 350 aa12.74□□□□□ -0.37
PDLIM2-201ENST00000265810 CYSLTR2Q9NS75 346 aa12.74□□□□□ -0.37
PDLIM2-201ENST00000265810 PLEKHB1Q9UF11 243 aaPredicted RBP12.74□□□□□ -0.37
PDLIM2-201ENST00000265810 TMEM82A0PJX8 343 aa12.74□□□□□ -0.37
PDLIM2-201ENST00000265810 PTHLHP12272 177 aa12.74□□□□□ -0.37
PDLIM2-201ENST00000265810 TDGF1P13385 188 aa12.74□□□□□ -0.37
PDLIM2-201ENST00000265810 AKR1C2P52895 323 aa12.74□□□□□ -0.37
PDLIM2-201ENST00000265810 SLC25A47Q6Q0C1 308 aa12.74□□□□□ -0.37
PDLIM2-201ENST00000265810 CCDC71LQ8N9Z2 235 aa12.74□□□□□ -0.37
PDLIM2-201ENST00000265810 TIMP4Q99727 224 aa12.74□□□□□ -0.37
PDLIM2-201ENST00000265810 ZNF391Q9UJN7 358 aa12.74□□□□□ -0.37
PDLIM2-201ENST00000265810 ST3GAL6Q9Y274 331 aa12.74□□□□□ -0.37
PDLIM2-201ENST00000265810 FAM221AA4D161 298 aa12.74□□□□□ -0.37
PDLIM2-201ENST00000265810 ARHGEF39Q8N4T4 335 aa12.74□□□□□ -0.37
PDLIM2-201ENST00000265810 DEFB108BQ8NET1 73 aa12.74□□□□□ -0.37
PDLIM2-201ENST00000265810 GIMAP1Q8WWP7 306 aa12.74□□□□□ -0.37
PDLIM2-201ENST00000265810 SPSB1Q96BD6 273 aa12.74□□□□□ -0.37
PDLIM2-201ENST00000265810 DEPPQ9NTK1 212 aa12.74□□□□□ -0.37
PDLIM2-201ENST00000265810 TMEM100Q9NV29 134 aa12.74□□□□□ -0.37
PDLIM2-201ENST00000265810 COL6A6A6NMZ7 2263 aa12.74□□□□□ -0.37
PDLIM2-201ENST00000265810 EFSO43281 561 aa12.74□□□□□ -0.37
PDLIM2-201ENST00000265810 CA6P23280 308 aa12.74□□□□□ -0.37
PDLIM2-201ENST00000265810 MST1P26927 711 aa12.74□□□□□ -0.37
PDLIM2-201ENST00000265810 SWI5Q1ZZU3 235 aa12.74□□□□□ -0.37
PDLIM2-201ENST00000265810 GSG1LQ6UXU4 331 aa12.74□□□□□ -0.37
PDLIM2-201ENST00000265810 FAM214BQ7L5A3 538 aa12.74□□□□□ -0.37
PDLIM2-201ENST00000265810 PEX14O75381 377 aa12.73□□□□□ -0.37
PDLIM2-201ENST00000265810 ARHGDIBP52566 201 aa12.73□□□□□ -0.37
PDLIM2-201ENST00000265810 EDDM3BP56851 147 aa12.73□□□□□ -0.37
PDLIM2-201ENST00000265810 EDDM3AQ14507 147 aa12.73□□□□□ -0.37
PDLIM2-201ENST00000265810 MEX3BQ6ZN04 569 aaKnown RBP12.73□□□□□ -0.37
PDLIM2-201ENST00000265810 OR51S1Q8NGJ8 323 aa12.73□□□□□ -0.37
PDLIM2-201ENST00000265810 NICN1Q9BSH3 213 aa12.73□□□□□ -0.37
PDLIM2-201ENST00000265810 OPA3Q9H6K4 179 aa12.73□□□□□ -0.37
PDLIM2-201ENST00000265810 KLK11Q9UBX7 282 aa12.73□□□□□ -0.37
PDLIM2-201ENST00000265810 OR5V1Q9UGF6 321 aa12.73□□□□□ -0.37
PDLIM2-201ENST00000265810 CYB5R1Q9UHQ9 305 aa12.73□□□□□ -0.37
PDLIM2-201ENST00000265810 AGFG2O95081 481 aa12.73□□□□□ -0.37
PDLIM2-201ENST00000265810 HLA-AP01891 365 aaKnown RBP12.73□□□□□ -0.37
PDLIM2-201ENST00000265810 TAS2R31P59538 309 aa12.73□□□□□ -0.37
PDLIM2-201ENST00000265810 EIF2S3LQ2VIR3 472 aaKnown RBP12.73□□□□□ -0.37
PDLIM2-201ENST00000265810 ACTBL2Q562R1 376 aa12.73□□□□□ -0.37
PDLIM2-201ENST00000265810 CA5BP1Q8WTZ4 195 aa12.73□□□□□ -0.37
PDLIM2-201ENST00000265810 ASB5Q8WWX0 329 aa12.73□□□□□ -0.37
PDLIM2-201ENST00000265810 COL25A1Q9BXS0 654 aaPredicted RBP12.73□□□□□ -0.37
PDLIM2-201ENST00000265810 ZNF552Q9H707 407 aaPredicted RBP12.73□□□□□ -0.37
PDLIM2-201ENST00000265810 ARID1AO14497 2285 aa12.73□□□□□ -0.37
PDLIM2-201ENST00000265810 OPRM1P35372 400 aa12.73□□□□□ -0.37
PDLIM2-201ENST00000265810 CAMK2BQ13554 666 aa12.73□□□□□ -0.37
PDLIM2-201ENST00000265810 FAAP20Q6NZ36 180 aa12.73□□□□□ -0.37
PDLIM2-201ENST00000265810 EGLN1Q9GZT9 426 aa12.73□□□□□ -0.37
PDLIM2-201ENST00000265810 TRAV8-7A0A075B6U6 113 aa12.72□□□□□ -0.37
PDLIM2-201ENST00000265810 WDR1O75083 606 aa12.72□□□□□ -0.37
PDLIM2-201ENST00000265810 GDPD3Q7L5L3 318 aa12.72□□□□□ -0.37
PDLIM2-201ENST00000265810 C20orf196Q8IYI0 205 aa12.72□□□□□ -0.37
PDLIM2-201ENST00000265810 RND1Q92730 232 aa12.72□□□□□ -0.37
PDLIM2-201ENST00000265810 RRNAD1Q96FB5 475 aaKnown RBP12.72□□□□□ -0.37
PDLIM2-201ENST00000265810 RNF32Q9H0A6 362 aa12.72□□□□□ -0.37
PDLIM2-201ENST00000265810 ZNHIT1O43257 154 aa12.72□□□□□ -0.37
PDLIM2-201ENST00000265810 DUSP1P28562 367 aa12.72□□□□□ -0.37
PDLIM2-201ENST00000265810 ETV6P41212 452 aa12.72□□□□□ -0.37
PDLIM2-201ENST00000265810 PPA1Q15181 289 aa12.72□□□□□ -0.37
PDLIM2-201ENST00000265810 TSC22D1Q15714 1073 aa12.72□□□□□ -0.37
PDLIM2-201ENST00000265810 TMEM211Q6ICI0 200 aa12.72□□□□□ -0.37
PDLIM2-201ENST00000265810 MAFIPQ8WZ33 124 aa12.72□□□□□ -0.37
PDLIM2-201ENST00000265810 BARHL1Q9BZE3 327 aa12.72□□□□□ -0.37
PDLIM2-201ENST00000265810 NMNAT2Q9BZQ4 307 aa12.72□□□□□ -0.37
PDLIM2-201ENST00000265810 RANBP3Q9H6Z4 567 aaPredicted RBP12.72□□□□□ -0.37
PDLIM2-201ENST00000265810 GHRLQ9UBU3 117 aa12.72□□□□□ -0.37
PDLIM2-201ENST00000265810 PRSS50Q9UI38 385 aa12.72□□□□□ -0.37
PDLIM2-201ENST00000265810 AHRRA9YTQ3 701 aa12.72□□□□□ -0.37
PDLIM2-201ENST00000265810 XRCC3O43542 346 aa12.72□□□□□ -0.37
PDLIM2-201ENST00000265810 GLRA1P23415 457 aa12.72□□□□□ -0.37
PDLIM2-201ENST00000265810 Q0VFX4 171 aa12.72□□□□□ -0.37
PDLIM2-201ENST00000265810 BHLHA15Q7RTS1 189 aaPredicted RBP12.72□□□□□ -0.37
PDLIM2-201ENST00000265810 CXorf67Q86X51 503 aaPredicted RBP12.72□□□□□ -0.37
PDLIM2-201ENST00000265810 OR10R2Q8NGX6 335 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms