RNA–Protein interactions for RNA: ENST00000265081.6

MSH3-201, Transcript of mutS homolog 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH3, Length 4,092 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH3-201ENST00000265081 FGL1Q08830 312 aa9.76□□□□□ -0.85
MSH3-201ENST00000265081 DRAM2Q6UX65 266 aa9.76□□□□□ -0.85
MSH3-201ENST00000265081 OR8H3Q8N146 312 aa9.76□□□□□ -0.85
MSH3-201ENST00000265081 ADAMTS17Q8TE56 1095 aa9.76□□□□□ -0.85
MSH3-201ENST00000265081 SCARB1Q8WTV0 552 aa9.76□□□□□ -0.85
MSH3-201ENST00000265081 NUDCD2Q8WVJ2 157 aa9.76□□□□□ -0.85
MSH3-201ENST00000265081 DEPPQ9NTK1 212 aa9.76□□□□□ -0.85
MSH3-201ENST00000265081 GPR132Q9UNW8 380 aa9.76□□□□□ -0.85
MSH3-201ENST00000265081 OSGIN2Q9Y236 505 aa9.76□□□□□ -0.85
MSH3-201ENST00000265081 RNF222A6NCQ9 220 aa9.76□□□□□ -0.85
MSH3-201ENST00000265081 NPIPA2E9PIF3 369 aa9.76□□□□□ -0.85
MSH3-201ENST00000265081 NPIPA3F8WFD2 350 aa9.76□□□□□ -0.85
MSH3-201ENST00000265081 SOCS1O15524 211 aa9.76□□□□□ -0.85
MSH3-201ENST00000265081 RLN1P04808 185 aa9.76□□□□□ -0.85
MSH3-201ENST00000265081 HGFACQ04756 655 aa9.76□□□□□ -0.85
MSH3-201ENST00000265081 KISS1Q15726 138 aa9.76□□□□□ -0.85
MSH3-201ENST00000265081 AANATQ16613 207 aa9.76□□□□□ -0.85
MSH3-201ENST00000265081 MICBQ29980 383 aa9.76□□□□□ -0.85
MSH3-201ENST00000265081 RNASE10Q5GAN6 216 aaKnown RBP9.76□□□□□ -0.85
MSH3-201ENST00000265081 C6orf15Q6UXA7 325 aaPredicted RBP9.76□□□□□ -0.85
MSH3-201ENST00000265081 KCNRGQ8N5I3 272 aa9.76□□□□□ -0.85
MSH3-201ENST00000265081 OR52H1Q8NGJ2 320 aa9.76□□□□□ -0.85
MSH3-201ENST00000265081 SPSB4Q96A44 273 aa9.76□□□□□ -0.85
MSH3-201ENST00000265081 LOXL4Q96JB6 756 aa9.76□□□□□ -0.85
MSH3-201ENST00000265081 CST11Q9H112 138 aa9.76□□□□□ -0.85
MSH3-201ENST00000265081 IL36GQ9NZH8 169 aa9.76□□□□□ -0.85
MSH3-201ENST00000265081 KCNN3Q9UGI6 736 aa9.76□□□□□ -0.85
MSH3-201ENST00000265081 OR5H15A6NDH6 313 aa9.76□□□□□ -0.85
MSH3-201ENST00000265081 SIX6O95475 246 aa9.76□□□□□ -0.85
MSH3-201ENST00000265081 NMBP08949 121 aa9.76□□□□□ -0.85
MSH3-201ENST00000265081 BAMBIQ13145 260 aa9.76□□□□□ -0.85
MSH3-201ENST00000265081 GFOD2Q3B7J2 385 aa9.76□□□□□ -0.85
MSH3-201ENST00000265081 RAET1LQ5VY80 246 aa9.76□□□□□ -0.85
MSH3-201ENST00000265081 ZNF660Q6AZW8 331 aaPredicted RBP9.76□□□□□ -0.85
MSH3-201ENST00000265081 JMJD6Q6NYC1 403 aaPredicted RBP9.76□□□□□ -0.85
MSH3-201ENST00000265081 TMEM105Q8N8V8 129 aa9.76□□□□□ -0.85
MSH3-201ENST00000265081 STEAP2Q8NFT2 490 aa9.76□□□□□ -0.85
MSH3-201ENST00000265081 TMEM230Q96A57 120 aa9.76□□□□□ -0.85
MSH3-201ENST00000265081 POM121Q96HA1 1249 aa9.76□□□□□ -0.85
MSH3-201ENST00000265081 TAAR9Q96RI9 348 aa9.76□□□□□ -0.85
MSH3-201ENST00000265081 B3GNT4Q9C0J1 378 aa9.76□□□□□ -0.85
MSH3-201ENST00000265081 ZMAT3Q9HA38 289 aaKnown RBP9.76□□□□□ -0.85
MSH3-201ENST00000265081 NCOA6Q14686 2063 aaPredicted RBP9.75□□□□□ -0.85
MSH3-201ENST00000265081 A0A1W2PNU3 283 aaPredicted RBP9.75□□□□□ -0.85
MSH3-201ENST00000265081 SS18L1O75177 396 aaPredicted RBP9.75□□□□□ -0.85
MSH3-201ENST00000265081 HPNP05981 417 aa9.75□□□□□ -0.85
MSH3-201ENST00000265081 RPS2P15880 293 aaKnown RBP9.75□□□□□ -0.85
MSH3-201ENST00000265081 TAS2R31P59538 309 aa9.75□□□□□ -0.85
MSH3-201ENST00000265081 PPP1R1AQ13522 171 aa9.75□□□□□ -0.85
MSH3-201ENST00000265081 C4orf46Q504U0 113 aa9.75□□□□□ -0.85
MSH3-201ENST00000265081 RTL6Q6ICC9 239 aa9.75□□□□□ -0.85
MSH3-201ENST00000265081 DACT3Q96B18 629 aaPredicted RBP9.75□□□□□ -0.85
MSH3-201ENST00000265081 SGK3Q96BR1 496 aa9.75□□□□□ -0.85
MSH3-201ENST00000265081 ZNF837Q96EG3 531 aaPredicted RBP9.75□□□□□ -0.85
MSH3-201ENST00000265081 TMEM59Q9BXS4 323 aa9.75□□□□□ -0.85
MSH3-201ENST00000265081 LOXL2Q9Y4K0 774 aa9.75□□□□□ -0.85
MSH3-201ENST00000265081 TSC22D2O75157 780 aa9.75□□□□□ -0.85
MSH3-201ENST00000265081 M6PRP20645 277 aa9.75□□□□□ -0.85
MSH3-201ENST00000265081 CNR1P21554 472 aa9.75□□□□□ -0.85
MSH3-201ENST00000265081 AADACL3Q5VUY0 350 aa9.75□□□□□ -0.85
MSH3-201ENST00000265081 OR52W1Q6IF63 320 aa9.75□□□□□ -0.85
MSH3-201ENST00000265081 ZNF283Q8N7M2 679 aa9.75□□□□□ -0.85
MSH3-201ENST00000265081 RAB3CQ96E17 227 aa9.75□□□□□ -0.85
MSH3-201ENST00000265081 LINC00470Q9BZP3 86 aa9.75□□□□□ -0.85
MSH3-201ENST00000265081 RNF122Q9H9V4 155 aa9.75□□□□□ -0.85
MSH3-201ENST00000265081 SDK2Q58EX2 2172 aa9.75□□□□□ -0.85
MSH3-201ENST00000265081 KNL1Q8NG31 2342 aa9.75□□□□□ -0.85
MSH3-201ENST00000265081 IGHV3-15A0A0B4J1V0 119 aa9.75□□□□□ -0.85
MSH3-201ENST00000265081 RPL36A-HNRNPH2H7BZ11 118 aa9.75□□□□□ -0.85
MSH3-201ENST00000265081 SLC2A1P11166 492 aa9.75□□□□□ -0.85
MSH3-201ENST00000265081 AGTR1P30556 359 aa9.75□□□□□ -0.85
MSH3-201ENST00000265081 SURF2Q15527 256 aaPredicted RBP9.75□□□□□ -0.85
MSH3-201ENST00000265081 TAF13Q15543 124 aa9.75□□□□□ -0.85
MSH3-201ENST00000265081 C1QL2Q7Z5L3 287 aa9.75□□□□□ -0.85
MSH3-201ENST00000265081 Q8NFD4 153 aa9.75□□□□□ -0.85
MSH3-201ENST00000265081 Q96M66 194 aa9.75□□□□□ -0.85
MSH3-201ENST00000265081 NMES1Q9C002 83 aa9.75□□□□□ -0.85
MSH3-201ENST00000265081 MYEF2Q9P2K5 600 aaKnown RBP9.75□□□□□ -0.85
MSH3-201ENST00000265081 POLR1DQ9Y2S0 133 aa9.75□□□□□ -0.85
MSH3-201ENST00000265081 SERPINE3A8MV23 424 aa9.74□□□□□ -0.85
MSH3-201ENST00000265081 M0R135 149 aa9.74□□□□□ -0.85
MSH3-201ENST00000265081 WDPCPO95876 746 aa9.74□□□□□ -0.85
MSH3-201ENST00000265081 MMP7P09237 267 aaPredicted RBP9.74□□□□□ -0.85
MSH3-201ENST00000265081 RFPL3SP0C7P2 107 aa9.74□□□□□ -0.85
MSH3-201ENST00000265081 MGMTP16455 207 aa9.74□□□□□ -0.85
MSH3-201ENST00000265081 PRKXP51817 358 aa9.74□□□□□ -0.85
MSH3-201ENST00000265081 SNAI3Q3KNW1 292 aa9.74□□□□□ -0.85
MSH3-201ENST00000265081 COLCA1Q6ZS62 124 aa9.74□□□□□ -0.85
MSH3-201ENST00000265081 SPSB1Q96BD6 273 aa9.74□□□□□ -0.85
MSH3-201ENST00000265081 ZNF799Q96GE5 643 aa9.74□□□□□ -0.85
MSH3-201ENST00000265081 GAL3ST1Q99999 423 aa9.74□□□□□ -0.85
MSH3-201ENST00000265081 PECRQ9BY49 303 aa9.74□□□□□ -0.85
MSH3-201ENST00000265081 SELENOIQ9C0D9 397 aa9.74□□□□□ -0.85
MSH3-201ENST00000265081 PADI1Q9ULC6 663 aa9.74□□□□□ -0.85
MSH3-201ENST00000265081 HSF4Q9ULV5 492 aa9.74□□□□□ -0.85
MSH3-201ENST00000265081 A0A0D9SG52 128 aa9.74□□□□□ -0.85
MSH3-201ENST00000265081 PINLYPA6NC86 204 aa9.74□□□□□ -0.85
MSH3-201ENST00000265081 FIGNL2A6NMB9 653 aa9.74□□□□□ -0.85
MSH3-201ENST00000265081 A8MXK9 166 aa9.74□□□□□ -0.85
MSH3-201ENST00000265081 C9orf172C9J069 976 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms