RNA–Protein interactions for RNA: ENST00000261769.9

CDH1-201, Transcript of cadherin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH1, Length 4,889 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-201ENST00000261769 GSK3AP49840 483 aa12.4□□□□□ -0.42
CDH1-201ENST00000261769 KLRB1Q12918 225 aa12.4□□□□□ -0.42
CDH1-201ENST00000261769 P2RY6Q15077 328 aa12.4□□□□□ -0.42
CDH1-201ENST00000261769 C2orf76Q3KRA6 126 aa12.4□□□□□ -0.42
CDH1-201ENST00000261769 FJX1Q86VR8 437 aa12.4□□□□□ -0.42
CDH1-201ENST00000261769 SMAP2Q8WU79 429 aaPredicted RBP12.4□□□□□ -0.42
CDH1-201ENST00000261769 ASB10Q8WXI3 467 aa12.4□□□□□ -0.42
CDH1-201ENST00000261769 GALMQ96C23 342 aa12.4□□□□□ -0.42
CDH1-201ENST00000261769 CMBLQ96DG6 245 aa12.4□□□□□ -0.42
CDH1-201ENST00000261769 ICAM5Q9UMF0 924 aa12.4□□□□□ -0.42
CDH1-201ENST00000261769 CTLA4P16410 223 aa12.39□□□□□ -0.43
CDH1-201ENST00000261769 RPS16P62249 146 aaKnown RBP12.39□□□□□ -0.43
CDH1-201ENST00000261769 CDC20BQ86Y33 519 aa12.39□□□□□ -0.43
CDH1-201ENST00000261769 PTP4A1Q93096 173 aa12.39□□□□□ -0.43
CDH1-201ENST00000261769 IL17BQ9UHF5 180 aa12.39□□□□□ -0.43
CDH1-201ENST00000261769 LAMP3Q9UQV4 416 aa12.39□□□□□ -0.43
CDH1-201ENST00000261769 ANKRD33BA6NCL7 494 aa12.39□□□□□ -0.43
CDH1-201ENST00000261769 ZNF354AO60765 605 aaPredicted RBP12.39□□□□□ -0.43
CDH1-201ENST00000261769 CST2P09228 141 aa12.39□□□□□ -0.43
CDH1-201ENST00000261769 CDKN2AP42771 156 aaKnown RBP12.39□□□□□ -0.43
CDH1-201ENST00000261769 BRICD5Q6PL45 260 aa12.39□□□□□ -0.43
CDH1-201ENST00000261769 SIAH3Q8IW03 269 aa12.39□□□□□ -0.43
CDH1-201ENST00000261769 SERPINE3A8MV23 424 aa12.39□□□□□ -0.43
CDH1-201ENST00000261769 K7ESF4 209 aa12.39□□□□□ -0.43
CDH1-201ENST00000261769 TO15178 435 aa12.39□□□□□ -0.43
CDH1-201ENST00000261769 BTNL3Q6UXE8 466 aa12.39□□□□□ -0.43
CDH1-201ENST00000261769 DVL3Q92997 716 aaPredicted RBP12.39□□□□□ -0.43
CDH1-201ENST00000261769 TMEM246Q9BRR3 403 aa12.39□□□□□ -0.43
CDH1-201ENST00000261769 CXXC4Q9H2H0 198 aa12.39□□□□□ -0.43
CDH1-201ENST00000261769 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.39□□□□□ -0.43
CDH1-201ENST00000261769 MEIOCA2RUB1 952 aa12.39□□□□□ -0.43
CDH1-201ENST00000261769 SSX5O60225 188 aa12.39□□□□□ -0.43
CDH1-201ENST00000261769 SOX18P35713 384 aa12.39□□□□□ -0.43
CDH1-201ENST00000261769 PRDX4Q13162 271 aa12.39□□□□□ -0.43
CDH1-201ENST00000261769 IAH1Q2TAA2 248 aaPredicted RBP12.39□□□□□ -0.43
CDH1-201ENST00000261769 ATPAF1Q5TC12 328 aaPredicted RBP12.39□□□□□ -0.43
CDH1-201ENST00000261769 CATSPERDQ86XM0 798 aa12.39□□□□□ -0.43
CDH1-201ENST00000261769 OR5D13Q8NGL4 314 aa12.39□□□□□ -0.43
CDH1-201ENST00000261769 ABHD3Q8WU67 409 aa12.39□□□□□ -0.43
CDH1-201ENST00000261769 COMMD5Q9GZQ3 224 aa12.39□□□□□ -0.43
CDH1-201ENST00000261769 FLRT3Q9NZU0 649 aa12.39□□□□□ -0.43
CDH1-201ENST00000261769 TMEM235A6NFC5 223 aa12.38□□□□□ -0.43
CDH1-201ENST00000261769 AQP8O94778 261 aa12.38□□□□□ -0.43
CDH1-201ENST00000261769 SCGB2A2Q13296 93 aa12.38□□□□□ -0.43
CDH1-201ENST00000261769 MOB1BQ7L9L4 216 aa12.38□□□□□ -0.43
CDH1-201ENST00000261769 GIMAP1Q8WWP7 306 aa12.38□□□□□ -0.43
CDH1-201ENST00000261769 PELI1Q96FA3 418 aa12.38□□□□□ -0.43
CDH1-201ENST00000261769 PPIL3Q9H2H8 161 aaKnown RBP12.38□□□□□ -0.43
CDH1-201ENST00000261769 UBTD1Q9HAC8 227 aa12.38□□□□□ -0.43
CDH1-201ENST00000261769 NTN4Q9HB63 628 aa12.38□□□□□ -0.43
CDH1-201ENST00000261769 A0A1B0GV50 99 aa12.38□□□□□ -0.43
CDH1-201ENST00000261769 PRR19A6NJB7 356 aa12.38□□□□□ -0.43
CDH1-201ENST00000261769 EPHA2P29317 976 aa12.38□□□□□ -0.43
CDH1-201ENST00000261769 ALDH3B2P48448 385 aa12.38□□□□□ -0.43
CDH1-201ENST00000261769 POU4F3Q15319 338 aa12.38□□□□□ -0.43
CDH1-201ENST00000261769 TATDN3Q17R31 274 aa12.38□□□□□ -0.43
CDH1-201ENST00000261769 SOWAHCQ53LP3 525 aaPredicted RBP12.38□□□□□ -0.43
CDH1-201ENST00000261769 NHLRC1Q6VVB1 395 aa12.38□□□□□ -0.43
CDH1-201ENST00000261769 LIN7CQ9NUP9 197 aaKnown RBP12.38□□□□□ -0.43
CDH1-201ENST00000261769 TRAV38-1A0A0B4J264 116 aa12.38□□□□□ -0.43
CDH1-201ENST00000261769 SLC17A2O00624 439 aa12.38□□□□□ -0.43
CDH1-201ENST00000261769 ALOX5APP20292 161 aa12.38□□□□□ -0.43
CDH1-201ENST00000261769 TUBG1P23258 451 aa12.38□□□□□ -0.43
CDH1-201ENST00000261769 C1QL3Q5VWW1 255 aa12.38□□□□□ -0.43
CDH1-201ENST00000261769 LINC00299Q6ZSB3 139 aa12.38□□□□□ -0.43
CDH1-201ENST00000261769 C1orf174Q8IYL3 243 aa12.38□□□□□ -0.43
CDH1-201ENST00000261769 CORO2AQ92828 525 aa12.38□□□□□ -0.43
CDH1-201ENST00000261769 EXTL1Q92935 676 aa12.38□□□□□ -0.43
CDH1-201ENST00000261769 TRAV1-2A0A0B4J238 106 aa12.38□□□□□ -0.43
CDH1-201ENST00000261769 SULT1C2O00338 296 aa12.38□□□□□ -0.43
CDH1-201ENST00000261769 S100A2P29034 98 aa12.38□□□□□ -0.43
CDH1-201ENST00000261769 FAM219BQ5XKK7 198 aa12.38□□□□□ -0.43
CDH1-201ENST00000261769 TRAT1Q6PIZ9 186 aa12.38□□□□□ -0.43
CDH1-201ENST00000261769 ZAR1Q86SH2 424 aa12.38□□□□□ -0.43
CDH1-201ENST00000261769 ZNF546Q86UE3 836 aa12.38□□□□□ -0.43
CDH1-201ENST00000261769 SMIM3Q9BZL3 60 aa12.38□□□□□ -0.43
CDH1-201ENST00000261769 NARFLQ9H6Q4 476 aa12.38□□□□□ -0.43
CDH1-201ENST00000261769 GPR35Q9HC97 309 aa12.38□□□□□ -0.43
CDH1-201ENST00000261769 MLXQ9UH92 298 aa12.38□□□□□ -0.43
CDH1-201ENST00000261769 PCYT1BQ9Y5K3 369 aaPredicted RBP12.38□□□□□ -0.43
CDH1-201ENST00000261769 ABCA7Q8IZY2 2146 aa12.38□□□□□ -0.43
CDH1-201ENST00000261769 ACACAQ13085 2346 aa12.37□□□□□ -0.43
CDH1-201ENST00000261769 RP1P56715 2156 aa12.37□□□□□ -0.43
CDH1-201ENST00000261769 PRICKLE3O43900 615 aaPredicted RBP12.37□□□□□ -0.43
CDH1-201ENST00000261769 RFX2P48378 723 aa12.37□□□□□ -0.43
CDH1-201ENST00000261769 ZNF626Q68DY1 528 aa12.37□□□□□ -0.43
CDH1-201ENST00000261769 FAM58AQ8N1B3 248 aa12.37□□□□□ -0.43
CDH1-201ENST00000261769 OR10R2Q8NGX6 335 aa12.37□□□□□ -0.43
CDH1-201ENST00000261769 LRRC29Q8WV35 223 aa12.37□□□□□ -0.43
CDH1-201ENST00000261769 ARL11Q969Q4 196 aa12.37□□□□□ -0.43
CDH1-201ENST00000261769 RBMXL1Q96E39 390 aaKnown RBP12.37□□□□□ -0.43
CDH1-201ENST00000261769 ZNF251Q9BRH9 671 aa12.37□□□□□ -0.43
CDH1-201ENST00000261769 ZNF2Q9BSG1 426 aaPredicted RBP12.37□□□□□ -0.43
CDH1-201ENST00000261769 ISG20L2Q9H9L3 353 aaKnown RBP12.37□□□□□ -0.43
CDH1-201ENST00000261769 ONECUT1Q9UBC0 465 aa12.37□□□□□ -0.43
CDH1-201ENST00000261769 GPX5O75715 221 aa12.37□□□□□ -0.43
CDH1-201ENST00000261769 TGM6O95932 706 aa12.37□□□□□ -0.43
CDH1-201ENST00000261769 RPA2P15927 270 aa12.37□□□□□ -0.43
CDH1-201ENST00000261769 PCMT1P22061 227 aa12.37□□□□□ -0.43
CDH1-201ENST00000261769 PNLIPRP3Q17RR3 467 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms