RNA–Protein interactions for RNA: ENST00000256474.2

VHL-201, Transcript of von Hippel-Lindau tumor suppressor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VHL, Length 3,737 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VHL-201ENST00000256474 GUSBP11Q6P575 273 aa11.94□□□□□ -0.5
VHL-201ENST00000256474 BAP18Q8IXM2 172 aa11.94□□□□□ -0.5
VHL-201ENST00000256474 ZSCAN4Q8NAM6 433 aaPredicted RBP11.94□□□□□ -0.5
VHL-201ENST00000256474 OR5AP2Q8NGF4 316 aa11.94□□□□□ -0.5
VHL-201ENST00000256474 MFSD8Q8NHS3 518 aa11.94□□□□□ -0.5
VHL-201ENST00000256474 OR10C1Q96KK4 312 aa11.94□□□□□ -0.5
VHL-201ENST00000256474 URM1Q9BTM9 101 aaKnown RBP11.94□□□□□ -0.5
VHL-201ENST00000256474 SPTBN2O15020 2390 aa11.94□□□□□ -0.5
VHL-201ENST00000256474 SHISA7A6NL88 538 aa11.94□□□□□ -0.5
VHL-201ENST00000256474 DNASE2O00115 360 aaPredicted RBP11.94□□□□□ -0.5
VHL-201ENST00000256474 LRP3O75074 770 aa11.94□□□□□ -0.5
VHL-201ENST00000256474 CTRB1P17538 263 aa11.94□□□□□ -0.5
VHL-201ENST00000256474 CTRB2Q6GPI1 263 aa11.94□□□□□ -0.5
VHL-201ENST00000256474 ALX4Q9H161 411 aaPredicted RBP11.94□□□□□ -0.5
VHL-201ENST00000256474 PLEKHJ1Q9NW61 149 aa11.94□□□□□ -0.5
VHL-201ENST00000256474 TNFSF12-TNFSF13A0A0A6YY99 330 aa11.93□□□□□ -0.5
VHL-201ENST00000256474 ANKUB1A6NFN9 424 aa11.93□□□□□ -0.5
VHL-201ENST00000256474 H0YIZ8 118 aa11.93□□□□□ -0.5
VHL-201ENST00000256474 CDC14BO60729 498 aa11.93□□□□□ -0.5
VHL-201ENST00000256474 NXPH3O95157 252 aa11.93□□□□□ -0.5
VHL-201ENST00000256474 APOBEC1P41238 236 aaKnown RBP11.93□□□□□ -0.5
VHL-201ENST00000256474 MMP16P51512 607 aa11.93□□□□□ -0.5
VHL-201ENST00000256474 ZNF616Q08AN1 781 aa11.93□□□□□ -0.5
VHL-201ENST00000256474 C9orf135Q5VTT2 229 aa11.93□□□□□ -0.5
VHL-201ENST00000256474 TFAP2EQ6VUC0 442 aa11.93□□□□□ -0.5
VHL-201ENST00000256474 ANKRD37Q7Z713 158 aa11.93□□□□□ -0.5
VHL-201ENST00000256474 CLRN3Q8NCR9 226 aa11.93□□□□□ -0.5
VHL-201ENST00000256474 UCN2Q96RP3 112 aa11.93□□□□□ -0.5
VHL-201ENST00000256474 TLNRD1Q9H1K6 362 aa11.93□□□□□ -0.5
VHL-201ENST00000256474 OR10A2Q9H208 303 aa11.93□□□□□ -0.5
VHL-201ENST00000256474 C5orf66Q9H5L9 145 aa11.93□□□□□ -0.5
VHL-201ENST00000256474 CYB5R1Q9UHQ9 305 aa11.93□□□□□ -0.5
VHL-201ENST00000256474 A0A1W2PR77 199 aa11.93□□□□□ -0.5
VHL-201ENST00000256474 ZNF850A8MQ14 1090 aa11.93□□□□□ -0.5
VHL-201ENST00000256474 E9PLN8 166 aa11.93□□□□□ -0.5
VHL-201ENST00000256474 H3BMH7 237 aa11.93□□□□□ -0.5
VHL-201ENST00000256474 BCAT2O15382 392 aaPredicted RBP11.93□□□□□ -0.5
VHL-201ENST00000256474 NUDT21O43809 227 aaKnown RBP11.93□□□□□ -0.5
VHL-201ENST00000256474 GUSBP08236 651 aa11.93□□□□□ -0.5
VHL-201ENST00000256474 IFI6P09912 130 aa11.93□□□□□ -0.5
VHL-201ENST00000256474 CD80P33681 288 aa11.93□□□□□ -0.5
VHL-201ENST00000256474 RBMXP38159 391 aaKnown RBP11.93□□□□□ -0.5
VHL-201ENST00000256474 TMEM50BP56557 158 aa11.93□□□□□ -0.5
VHL-201ENST00000256474 IAH1Q2TAA2 248 aaPredicted RBP11.93□□□□□ -0.5
VHL-201ENST00000256474 ANKRD55Q3KP44 614 aa11.93□□□□□ -0.5
VHL-201ENST00000256474 PHLDA2Q53GA4 152 aa11.93□□□□□ -0.5
VHL-201ENST00000256474 C1orf100Q5SVJ3 147 aa11.93□□□□□ -0.5
VHL-201ENST00000256474 RPL7L1Q6DKI1 246 aaKnown RBP11.93□□□□□ -0.5
VHL-201ENST00000256474 ARL11Q969Q4 196 aa11.93□□□□□ -0.5
VHL-201ENST00000256474 ZNF501Q96CX3 271 aaPredicted RBP11.93□□□□□ -0.5
VHL-201ENST00000256474 ZNF285Q96NJ3 590 aa11.93□□□□□ -0.5
VHL-201ENST00000256474 DOCK7Q96N67 2140 aa11.93□□□□□ -0.5
VHL-201ENST00000256474 A0A1W2PQD3 144 aa11.93□□□□□ -0.5
VHL-201ENST00000256474 XRCC2O43543 280 aa11.93□□□□□ -0.5
VHL-201ENST00000256474 DIRAS3O95661 229 aa11.93□□□□□ -0.5
VHL-201ENST00000256474 HIST1H1DP16402 221 aaKnown RBP11.93□□□□□ -0.5
VHL-201ENST00000256474 PEG10Q86TG7 708 aaKnown RBP11.93□□□□□ -0.5
VHL-201ENST00000256474 KCNG3Q8TAE7 436 aa11.93□□□□□ -0.5
VHL-201ENST00000256474 STOML3Q8TAV4 291 aa11.93□□□□□ -0.5
VHL-201ENST00000256474 CNTNAP3BQ96NU0 1288 aa11.93□□□□□ -0.5
VHL-201ENST00000256474 PIGLQ9Y2B2 252 aa11.93□□□□□ -0.5
VHL-201ENST00000256474 HSPB2A8KAH6 182 aa11.92□□□□□ -0.5
VHL-201ENST00000256474 DUS4LO95620 317 aaKnown RBP11.92□□□□□ -0.5
VHL-201ENST00000256474 CSTBP04080 98 aaKnown RBP11.92□□□□□ -0.5
VHL-201ENST00000256474 FSTP19883 344 aa11.92□□□□□ -0.5
VHL-201ENST00000256474 SMAD4Q13485 552 aaKnown RBP11.92□□□□□ -0.5
VHL-201ENST00000256474 HSPB2Q16082 182 aa11.92□□□□□ -0.5
VHL-201ENST00000256474 ETV3LQ6ZN32 361 aa11.92□□□□□ -0.5
VHL-201ENST00000256474 DNM1P46Q6ZS02 220 aa11.92□□□□□ -0.5
VHL-201ENST00000256474 SPAG16Q8N0X2 631 aa11.92□□□□□ -0.5
VHL-201ENST00000256474 REEP6Q96HR9 211 aa11.92□□□□□ -0.5
VHL-201ENST00000256474 ZNF581Q9P0T4 197 aa11.92□□□□□ -0.5
VHL-201ENST00000256474 ZNF629Q9UEG4 869 aaPredicted RBP11.92□□□□□ -0.5
VHL-201ENST00000256474 BPNT1O95861 308 aa11.92□□□□□ -0.5
VHL-201ENST00000256474 CD74P04233 296 aa11.92□□□□□ -0.5
VHL-201ENST00000256474 PPT1P50897 306 aa11.92□□□□□ -0.5
VHL-201ENST00000256474 NXPH1P58417 271 aa11.92□□□□□ -0.5
VHL-201ENST00000256474 KISS1Q15726 138 aa11.92□□□□□ -0.5
VHL-201ENST00000256474 COL13A1Q5TAT6 717 aaPredicted RBP11.92□□□□□ -0.5
VHL-201ENST00000256474 PGAP1Q75T13 922 aa11.92□□□□□ -0.5
VHL-201ENST00000256474 OR5T2Q8NGG2 359 aa11.92□□□□□ -0.5
VHL-201ENST00000256474 MVB12AQ96EY5 273 aa11.92□□□□□ -0.5
VHL-201ENST00000256474 GLS2Q9UI32 602 aa11.92□□□□□ -0.5
VHL-201ENST00000256474 RARRES3Q9UL19 164 aa11.92□□□□□ -0.5
VHL-201ENST00000256474 C14orf166Q9Y224 244 aaKnown RBP11.92□□□□□ -0.5
VHL-201ENST00000256474 B3GALT5Q9Y2C3 310 aa11.92□□□□□ -0.5
VHL-201ENST00000256474 A0A1B0GTI1 187 aa11.91□□□□□ -0.5
VHL-201ENST00000256474 TMEM218A2RU14 115 aa11.91□□□□□ -0.5
VHL-201ENST00000256474 HSPB6O14558 160 aa11.91□□□□□ -0.5
VHL-201ENST00000256474 PRH1P02810 166 aa11.91□□□□□ -0.5
VHL-201ENST00000256474 IL32P24001 234 aa11.91□□□□□ -0.5
VHL-201ENST00000256474 SWI5Q1ZZU3 235 aa11.91□□□□□ -0.5
VHL-201ENST00000256474 TMEM128Q5BJH2 165 aa11.91□□□□□ -0.5
VHL-201ENST00000256474 OR2A2Q6IF42 318 aa11.91□□□□□ -0.5
VHL-201ENST00000256474 TMEM156Q8N614 296 aa11.91□□□□□ -0.5
VHL-201ENST00000256474 ST8SIA1Q92185 356 aa11.91□□□□□ -0.5
VHL-201ENST00000256474 ZNF2Q9BSG1 426 aaPredicted RBP11.91□□□□□ -0.5
VHL-201ENST00000256474 PIGMQ9H3S5 423 aa11.91□□□□□ -0.5
VHL-201ENST00000256474 ALKBH4Q9NXW9 302 aa11.91□□□□□ -0.5
VHL-201ENST00000256474 NXT1Q9UKK6 140 aaKnown RBP11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms