RNA–Protein interactions for RNA: ENST00000248958.4

SDF2L1-201, Transcript of stromal cell derived factor 2 like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDF2L1, Length 865 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2L1-201ENST00000248958 FAM20BO75063 409 aa20.45■□□□□ 0.86
SDF2L1-201ENST00000248958 MTRF1O75570 445 aaKnown RBP20.45■□□□□ 0.86
SDF2L1-201ENST00000248958 FOXH1O75593 365 aa20.45■□□□□ 0.86
SDF2L1-201ENST00000248958 IGLV3-1P01715 115 aa20.45■□□□□ 0.86
SDF2L1-201ENST00000248958 RCN1Q15293 331 aa20.45■□□□□ 0.86
SDF2L1-201ENST00000248958 MPPED2Q15777 294 aa20.45■□□□□ 0.86
SDF2L1-201ENST00000248958 ZBTB37Q5TC79 503 aa20.45■□□□□ 0.86
SDF2L1-201ENST00000248958 PLEKHG7Q6ZR37 379 aa20.45■□□□□ 0.86
SDF2L1-201ENST00000248958 COMMD2Q86X83 199 aa20.45■□□□□ 0.86
SDF2L1-201ENST00000248958 DVL3Q92997 716 aaPredicted RBP20.45■□□□□ 0.86
SDF2L1-201ENST00000248958 RNFT2Q96EX2 444 aa20.45■□□□□ 0.86
SDF2L1-201ENST00000248958 MYCBPQ99417 103 aaPredicted RBP20.45■□□□□ 0.86
SDF2L1-201ENST00000248958 LPAR2Q9HBW0 351 aa20.45■□□□□ 0.86
SDF2L1-201ENST00000248958 TMEM165Q9HC07 324 aa20.45■□□□□ 0.86
SDF2L1-201ENST00000248958 PLPP2O43688 288 aa20.44■□□□□ 0.86
SDF2L1-201ENST00000248958 PNPP00491 289 aa20.44■□□□□ 0.86
SDF2L1-201ENST00000248958 IFNA2P01563 188 aa20.44■□□□□ 0.86
SDF2L1-201ENST00000248958 GRPP07492 148 aa20.44■□□□□ 0.86
SDF2L1-201ENST00000248958 GABRB1P18505 474 aa20.44■□□□□ 0.86
SDF2L1-201ENST00000248958 ACKR3P25106 362 aa20.44■□□□□ 0.86
SDF2L1-201ENST00000248958 BCL2L15Q5TBC7 163 aa20.44■□□□□ 0.86
SDF2L1-201ENST00000248958 SSX6Q7RTT6 188 aa20.44■□□□□ 0.86
SDF2L1-201ENST00000248958 ENTHD1Q8IYW4 607 aa20.44■□□□□ 0.86
SDF2L1-201ENST00000248958 ELMOD2Q8IZ81 293 aa20.44■□□□□ 0.86
SDF2L1-201ENST00000248958 GALNT4Q8N4A0 578 aa20.44■□□□□ 0.86
SDF2L1-201ENST00000248958 SEMA6DQ8NFY4 1073 aa20.44■□□□□ 0.86
SDF2L1-201ENST00000248958 RHOXF1Q8NHV9 184 aa20.44■□□□□ 0.86
SDF2L1-201ENST00000248958 TRIM36Q9NQ86 728 aa20.44■□□□□ 0.86
SDF2L1-201ENST00000248958 G6PC2Q9NQR9 355 aa20.44■□□□□ 0.86
SDF2L1-201ENST00000248958 MIOXQ9UGB7 285 aa20.44■□□□□ 0.86
SDF2L1-201ENST00000248958 OR52A1Q9UKL2 312 aa20.44■□□□□ 0.86
SDF2L1-201ENST00000248958 GTF2A1LQ9UNN4 478 aa20.44■□□□□ 0.86
SDF2L1-201ENST00000248958 ZNF816-ZNF321PA0A0X1KG74 233 aa20.43■□□□□ 0.86
SDF2L1-201ENST00000248958 A6NLC8 198 aa20.43■□□□□ 0.86
SDF2L1-201ENST00000248958 F5H0A9 414 aaPredicted RBP20.43■□□□□ 0.86
SDF2L1-201ENST00000248958 APOL3O95236 402 aa20.43■□□□□ 0.86
SDF2L1-201ENST00000248958 TTRP02766 147 aa20.43■□□□□ 0.86
SDF2L1-201ENST00000248958 GATA3P23771 443 aa20.43■□□□□ 0.86
SDF2L1-201ENST00000248958 MFGE8Q08431 387 aaPredicted RBP20.43■□□□□ 0.86
SDF2L1-201ENST00000248958 RIPPLY1Q0D2K3 151 aa20.43■□□□□ 0.86
SDF2L1-201ENST00000248958 HNRNPA0Q13151 305 aaKnown RBP20.43■□□□□ 0.86
SDF2L1-201ENST00000248958 PRDX4Q13162 271 aa20.43■□□□□ 0.86
SDF2L1-201ENST00000248958 KCNJ8Q15842 424 aa20.43■□□□□ 0.86
SDF2L1-201ENST00000248958 ZNF404Q494X3 552 aa20.43■□□□□ 0.86
SDF2L1-201ENST00000248958 ZNF684Q5T5D7 378 aa20.43■□□□□ 0.86
SDF2L1-201ENST00000248958 FAM220AQ7Z4H9 259 aa20.43■□□□□ 0.86
SDF2L1-201ENST00000248958 THAP5Q7Z6K1 395 aa20.43■□□□□ 0.86
SDF2L1-201ENST00000248958 TEX29Q8N6K0 151 aa20.43■□□□□ 0.86
SDF2L1-201ENST00000248958 OR51E1Q8TCB6 317 aa20.43■□□□□ 0.86
SDF2L1-201ENST00000248958 PIGCQ92535 297 aa20.43■□□□□ 0.86
SDF2L1-201ENST00000248958 ITPKCQ96DU7 683 aa20.43■□□□□ 0.86
SDF2L1-201ENST00000248958 HIST1H2AAQ96QV6 131 aa20.43■□□□□ 0.86
SDF2L1-201ENST00000248958 RTL8AQ9BWD3 113 aa20.43■□□□□ 0.86
SDF2L1-201ENST00000248958 RNPEPL1Q9HAU8 725 aa20.43■□□□□ 0.86
SDF2L1-201ENST00000248958 GPR84Q9NQS5 396 aa20.43■□□□□ 0.86
SDF2L1-201ENST00000248958 C1orf123Q9NWV4 160 aa20.43■□□□□ 0.86
SDF2L1-201ENST00000248958 SONP18583 2426 aaKnown RBP20.43■□□□□ 0.86
SDF2L1-201ENST00000248958 TMEM210A6NLX4 147 aa20.42■□□□□ 0.86
SDF2L1-201ENST00000248958 CEACAM18A8MTB9 384 aa20.42■□□□□ 0.86
SDF2L1-201ENST00000248958 MAGEB4O15481 346 aaPredicted RBP20.42■□□□□ 0.86
SDF2L1-201ENST00000248958 DHRS3O75911 302 aa20.42■□□□□ 0.86
SDF2L1-201ENST00000248958 ZNF85Q03923 595 aa20.42■□□□□ 0.86
SDF2L1-201ENST00000248958 LIPNQ5VXI9 398 aa20.42■□□□□ 0.86
SDF2L1-201ENST00000248958 KCTD20Q7Z5Y7 419 aa20.42■□□□□ 0.86
SDF2L1-201ENST00000248958 ZDHHC23Q8IYP9 409 aa20.42■□□□□ 0.86
SDF2L1-201ENST00000248958 OR1M1Q8NGA1 313 aa20.42■□□□□ 0.86
SDF2L1-201ENST00000248958 EXOGQ9Y2C4 368 aaKnown RBP20.42■□□□□ 0.86
SDF2L1-201ENST00000248958 PPIAL4CA0A0B4J2A2 164 aa20.41■□□□□ 0.86
SDF2L1-201ENST00000248958 A0A0G2JMP0 313 aa20.41■□□□□ 0.86
SDF2L1-201ENST00000248958 A0A0X1KG70 313 aa20.41■□□□□ 0.86
SDF2L1-201ENST00000248958 ZNF850A8MQ14 1090 aa20.41■□□□□ 0.86
SDF2L1-201ENST00000248958 SRD5A1P18405 259 aa20.41■□□□□ 0.86
SDF2L1-201ENST00000248958 RBMXP38159 391 aaKnown RBP20.41■□□□□ 0.86
SDF2L1-201ENST00000248958 ESCO2Q56NI9 601 aa20.41■□□□□ 0.86
SDF2L1-201ENST00000248958 TTC23Q5W5X9 447 aa20.41■□□□□ 0.86
SDF2L1-201ENST00000248958 DCDC5Q6ZRR9 648 aa20.41■□□□□ 0.86
SDF2L1-201ENST00000248958 OR4M2Q8NGB6 313 aa20.41■□□□□ 0.86
SDF2L1-201ENST00000248958 OR5P3Q8WZ94 311 aa20.41■□□□□ 0.86
SDF2L1-201ENST00000248958 MRPL48Q96GC5 212 aaKnown RBP20.41■□□□□ 0.86
SDF2L1-201ENST00000248958 FAM71F1Q96KD3 344 aaPredicted RBP20.41■□□□□ 0.86
SDF2L1-201ENST00000248958 TMEM246Q9BRR3 403 aa20.41■□□□□ 0.86
SDF2L1-201ENST00000248958 LRCH1Q9Y2L9 728 aa20.41■□□□□ 0.86
SDF2L1-201ENST00000248958 POLR3KQ9Y2Y1 108 aaPredicted RBP20.41■□□□□ 0.86
SDF2L1-201ENST00000248958 DAPL1A0PJW8 107 aa20.4■□□□□ 0.86
SDF2L1-201ENST00000248958 A8MXK9 166 aa20.4■□□□□ 0.86
SDF2L1-201ENST00000248958 ANKRD65E5RJM6 399 aa20.4■□□□□ 0.86
SDF2L1-201ENST00000248958 J3QLI3 93 aa20.4■□□□□ 0.86
SDF2L1-201ENST00000248958 J3QRE1 110 aa20.4■□□□□ 0.86
SDF2L1-201ENST00000248958 RPP14O95059 124 aaKnown RBP20.4■□□□□ 0.86
SDF2L1-201ENST00000248958 WNT2P09544 360 aa20.4■□□□□ 0.86
SDF2L1-201ENST00000248958 RPS2P15880 293 aaKnown RBP20.4■□□□□ 0.86
SDF2L1-201ENST00000248958 ZNF154Q13106 437 aa20.4■□□□□ 0.86
SDF2L1-201ENST00000248958 LRRC36Q1X8D7 754 aa20.4■□□□□ 0.86
SDF2L1-201ENST00000248958 LPCAT4Q643R3 524 aa20.4■□□□□ 0.86
SDF2L1-201ENST00000248958 ZNF771Q7L3S4 317 aaPredicted RBP20.4■□□□□ 0.86
SDF2L1-201ENST00000248958 NLRC3Q7RTR2 1065 aa20.4■□□□□ 0.86
SDF2L1-201ENST00000248958 EGFL6Q8IUX8 553 aa20.4■□□□□ 0.86
SDF2L1-201ENST00000248958 ACBD7Q8N6N7 88 aa20.4■□□□□ 0.86
SDF2L1-201ENST00000248958 CCDC54Q8NEL0 328 aa20.4■□□□□ 0.86
SDF2L1-201ENST00000248958 PPP1R14AQ96A00 147 aa20.4■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms