RNA–Protein interactions for RNA: ENST00000242776.8

DDX39A-201, Transcript of DExD-box helicase 39A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX39A, Length 1,471 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-201ENST00000242776 ERI1Q8IV48 349 aaKnown RBP11.51□□□□□ -0.57
DDX39A-201ENST00000242776 OR6N2Q8NGY6 317 aa11.51□□□□□ -0.57
DDX39A-201ENST00000242776 CMBLQ96DG6 245 aa11.51□□□□□ -0.57
DDX39A-201ENST00000242776 INTS14Q96SY0 518 aa11.51□□□□□ -0.57
DDX39A-201ENST00000242776 CNN2Q99439 309 aaKnown RBP11.51□□□□□ -0.57
DDX39A-201ENST00000242776 NUDT16L1Q9BRJ7 211 aaKnown RBP11.51□□□□□ -0.57
DDX39A-201ENST00000242776 PCGF1Q9BSM1 259 aa11.51□□□□□ -0.57
DDX39A-201ENST00000242776 WACQ9BTA9 647 aa11.51□□□□□ -0.57
DDX39A-201ENST00000242776 ELOVL3Q9HB03 270 aa11.51□□□□□ -0.57
DDX39A-201ENST00000242776 SCN3BQ9NY72 215 aa11.51□□□□□ -0.57
DDX39A-201ENST00000242776 AASSQ9UDR5 926 aa11.51□□□□□ -0.57
DDX39A-201ENST00000242776 CGGBP1Q9UFW8 167 aaPredicted RBP11.51□□□□□ -0.57
DDX39A-201ENST00000242776 BLOC1S6Q9UL45 172 aa11.51□□□□□ -0.57
DDX39A-201ENST00000242776 COMMD3-BMI1R4GMX3 469 aa11.51□□□□□ -0.57
DDX39A-201ENST00000242776 ENTPD1P49961 510 aa11.5□□□□□ -0.57
DDX39A-201ENST00000242776 MMP16P51512 607 aa11.5□□□□□ -0.57
DDX39A-201ENST00000242776 KCNMB1Q16558 191 aa11.5□□□□□ -0.57
DDX39A-201ENST00000242776 TAF9Q16594 264 aa11.5□□□□□ -0.57
DDX39A-201ENST00000242776 KLHL22Q53GT1 634 aa11.5□□□□□ -0.57
DDX39A-201ENST00000242776 RBM48Q5RL73 367 aaKnown RBP11.5□□□□□ -0.57
DDX39A-201ENST00000242776 GPR157Q5UAW9 335 aa11.5□□□□□ -0.57
DDX39A-201ENST00000242776 Q6YL49 198 aa11.5□□□□□ -0.57
DDX39A-201ENST00000242776 SHFQ7M4L6 423 aa11.5□□□□□ -0.57
DDX39A-201ENST00000242776 ALDH16A1Q8IZ83 802 aa11.5□□□□□ -0.57
DDX39A-201ENST00000242776 MUC20Q8N307 709 aaPredicted RBP11.5□□□□□ -0.57
DDX39A-201ENST00000242776 C19orf18Q8NEA5 215 aa11.5□□□□□ -0.57
DDX39A-201ENST00000242776 OR10AD1Q8NGE0 317 aa11.5□□□□□ -0.57
DDX39A-201ENST00000242776 RNFT2Q96EX2 444 aa11.5□□□□□ -0.57
DDX39A-201ENST00000242776 SLC30A2Q9BRI3 323 aa11.5□□□□□ -0.57
DDX39A-201ENST00000242776 CDADC1Q9BWV3 514 aa11.5□□□□□ -0.57
DDX39A-201ENST00000242776 TCF7L1Q9HCS4 588 aa11.5□□□□□ -0.57
DDX39A-201ENST00000242776 ZNF281Q9Y2X9 895 aa11.5□□□□□ -0.57
DDX39A-201ENST00000242776 TVP23AA6NH52 213 aa11.49□□□□□ -0.57
DDX39A-201ENST00000242776 C12orf71A8MTZ7 269 aa11.49□□□□□ -0.57
DDX39A-201ENST00000242776 SLC1A7O00341 560 aa11.49□□□□□ -0.57
DDX39A-201ENST00000242776 MELTFP08582 738 aa11.49□□□□□ -0.57
DDX39A-201ENST00000242776 CST2P09228 141 aa11.49□□□□□ -0.57
DDX39A-201ENST00000242776 CCDC159P0C7I6 412 aa11.49□□□□□ -0.57
DDX39A-201ENST00000242776 NAA10P41227 235 aaPredicted RBP11.49□□□□□ -0.57
DDX39A-201ENST00000242776 PCBD1P61457 104 aa11.49□□□□□ -0.57
DDX39A-201ENST00000242776 RAB40BQ12829 278 aa11.49□□□□□ -0.57
DDX39A-201ENST00000242776 AQP6Q13520 282 aa11.49□□□□□ -0.57
DDX39A-201ENST00000242776 SMN1Q16637 294 aaKnown RBP11.49□□□□□ -0.57
DDX39A-201ENST00000242776 FAM27BQ5VT28 67 aa11.49□□□□□ -0.57
DDX39A-201ENST00000242776 OTPQ5XKR4 325 aa11.49□□□□□ -0.57
DDX39A-201ENST00000242776 SLC16A9Q7RTY1 509 aa11.49□□□□□ -0.57
DDX39A-201ENST00000242776 ZSCAN2Q7Z7L9 614 aaPredicted RBP11.49□□□□□ -0.57
DDX39A-201ENST00000242776 C1orf174Q8IYL3 243 aa11.49□□□□□ -0.57
DDX39A-201ENST00000242776 ZNF511Q8NB15 262 aa11.49□□□□□ -0.57
DDX39A-201ENST00000242776 BPIFB6Q8NFQ5 453 aa11.49□□□□□ -0.57
DDX39A-201ENST00000242776 OR51G2Q8NGK0 314 aa11.49□□□□□ -0.57
DDX39A-201ENST00000242776 OR2AJ1Q8NGZ0 328 aa11.49□□□□□ -0.57
DDX39A-201ENST00000242776 ZNRF4Q8WWF5 429 aa11.49□□□□□ -0.57
DDX39A-201ENST00000242776 MNTQ99583 582 aa11.49□□□□□ -0.57
DDX39A-201ENST00000242776 TMEM246Q9BRR3 403 aa11.49□□□□□ -0.57
DDX39A-201ENST00000242776 TMEM165Q9HC07 324 aa11.49□□□□□ -0.57
DDX39A-201ENST00000242776 GCM1Q9NP62 436 aa11.49□□□□□ -0.57
DDX39A-201ENST00000242776 PLCXD1Q9NUJ7 323 aa11.49□□□□□ -0.57
DDX39A-201ENST00000242776 MRPL22Q9NWU5 206 aaKnown RBP11.49□□□□□ -0.57
DDX39A-201ENST00000242776 CNOT2Q9NZN8 540 aaKnown RBP11.49□□□□□ -0.57
DDX39A-201ENST00000242776 STARD10Q9Y365 291 aa11.49□□□□□ -0.57
DDX39A-201ENST00000242776 TPRKBQ9Y3C4 175 aa11.49□□□□□ -0.57
DDX39A-201ENST00000242776 TIMM10BQ9Y5J6 103 aa11.49□□□□□ -0.57
DDX39A-201ENST00000242776 TMEM14AQ9Y6G1 99 aa11.49□□□□□ -0.57
DDX39A-201ENST00000242776 EFCAB10A6NFE3 127 aa11.48□□□□□ -0.57
DDX39A-201ENST00000242776 H0YL77 283 aa11.48□□□□□ -0.57
DDX39A-201ENST00000242776 PHYHO14832 338 aa11.48□□□□□ -0.57
DDX39A-201ENST00000242776 NDUFA7O95182 113 aa11.48□□□□□ -0.57
DDX39A-201ENST00000242776 FADS2O95864 444 aaKnown RBP11.48□□□□□ -0.57
DDX39A-201ENST00000242776 SFTPBP07988 381 aa11.48□□□□□ -0.57
DDX39A-201ENST00000242776 MRPL3P09001 348 aaKnown RBP11.48□□□□□ -0.57
DDX39A-201ENST00000242776 SPARCP09486 303 aa11.48□□□□□ -0.57
DDX39A-201ENST00000242776 PIPP12273 146 aaPredicted RBP11.48□□□□□ -0.57
DDX39A-201ENST00000242776 ACTC1P68032 377 aa11.48□□□□□ -0.57
DDX39A-201ENST00000242776 ACTA1P68133 377 aa11.48□□□□□ -0.57
DDX39A-201ENST00000242776 SCRN3Q0VDG4 424 aa11.48□□□□□ -0.57
DDX39A-201ENST00000242776 DBPQ10586 325 aaPredicted RBP11.48□□□□□ -0.57
DDX39A-201ENST00000242776 HLXQ14774 488 aaPredicted RBP11.48□□□□□ -0.57
DDX39A-201ENST00000242776 MEP1BQ16820 701 aa11.48□□□□□ -0.57
DDX39A-201ENST00000242776 TEX30Q5JUR7 227 aa11.48□□□□□ -0.57
DDX39A-201ENST00000242776 LYPD4Q6UWN0 246 aa11.48□□□□□ -0.57
DDX39A-201ENST00000242776 LYPD2Q6UXB3 125 aa11.48□□□□□ -0.57
DDX39A-201ENST00000242776 SYT9Q86SS6 491 aa11.48□□□□□ -0.57
DDX39A-201ENST00000242776 TIGD4Q8IY51 512 aa11.48□□□□□ -0.57
DDX39A-201ENST00000242776 OR8B3Q8NGG8 313 aa11.48□□□□□ -0.57
DDX39A-201ENST00000242776 SLC7A6Q92536 515 aa11.48□□□□□ -0.57
DDX39A-201ENST00000242776 NEIL1Q96FI4 390 aaPredicted RBP11.48□□□□□ -0.57
DDX39A-201ENST00000242776 OR8B2Q96RD0 313 aa11.48□□□□□ -0.57
DDX39A-201ENST00000242776 MYCBPQ99417 103 aaPredicted RBP11.48□□□□□ -0.57
DDX39A-201ENST00000242776 YTHDF1Q9BYJ9 559 aaKnown RBP11.48□□□□□ -0.57
DDX39A-201ENST00000242776 YIPF3Q9GZM5 350 aa11.48□□□□□ -0.57
DDX39A-201ENST00000242776 WDR76Q9H967 626 aa11.48□□□□□ -0.57
DDX39A-201ENST00000242776 ADGRL4Q9HBW9 690 aa11.48□□□□□ -0.57
DDX39A-201ENST00000242776 AMBNQ9NP70 447 aa11.48□□□□□ -0.57
DDX39A-201ENST00000242776 EMC7Q9NPA0 242 aa11.48□□□□□ -0.57
DDX39A-201ENST00000242776 ASH2LQ9UBL3 628 aa11.48□□□□□ -0.57
DDX39A-201ENST00000242776 IL19Q9UHD0 177 aa11.48□□□□□ -0.57
DDX39A-201ENST00000242776 TET2Q6N021 2002 aaPredicted RBP11.47□□□□□ -0.57
DDX39A-201ENST00000242776 KIR2DS1A0A191URI9 304 aa11.47□□□□□ -0.57
DDX39A-201ENST00000242776 G3V4G9 280 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms