RNA–Protein interactions for RNA: ENST00000226574.8

NFKB1-201, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NFKB1, Length 4,085 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-201ENST00000226574 SLC25A1P53007 311 aa12.29□□□□□ -0.44
NFKB1-201ENST00000226574 NECAP1Q8NC96 275 aa12.29□□□□□ -0.44
NFKB1-201ENST00000226574 OR13C8Q8NGS7 320 aa12.29□□□□□ -0.44
NFKB1-201ENST00000226574 OR51F2Q8NH61 342 aa12.29□□□□□ -0.44
NFKB1-201ENST00000226574 ELSPBP1Q96BH3 223 aa12.29□□□□□ -0.44
NFKB1-201ENST00000226574 ALKBH3Q96Q83 286 aaPredicted RBP12.29□□□□□ -0.44
NFKB1-201ENST00000226574 AICDAQ9GZX7 198 aa12.29□□□□□ -0.44
NFKB1-201ENST00000226574 FAM234AQ9H0X4 552 aa12.29□□□□□ -0.44
NFKB1-201ENST00000226574 LMX1BO60663 402 aa12.29□□□□□ -0.44
NFKB1-201ENST00000226574 SFTA3P0C7M3 94 aa12.29□□□□□ -0.44
NFKB1-201ENST00000226574 RPS16P62249 146 aaKnown RBP12.29□□□□□ -0.44
NFKB1-201ENST00000226574 RNF4P78317 190 aa12.29□□□□□ -0.44
NFKB1-201ENST00000226574 RGP1Q92546 391 aaPredicted RBP12.29□□□□□ -0.44
NFKB1-201ENST00000226574 SHDQ96IW2 340 aa12.29□□□□□ -0.44
NFKB1-201ENST00000226574 C2orf50Q96LR7 162 aa12.29□□□□□ -0.44
NFKB1-201ENST00000226574 NIPSNAP3BQ9BS92 247 aa12.29□□□□□ -0.44
NFKB1-201ENST00000226574 AMDHD2Q9Y303 409 aa12.29□□□□□ -0.44
NFKB1-201ENST00000226574 PRELID3BQ9Y3B1 194 aa12.29□□□□□ -0.44
NFKB1-201ENST00000226574 DOCK8Q8NF50 2099 aa12.29□□□□□ -0.44
NFKB1-201ENST00000226574 TRAPPC2LH3BP13 241 aa12.29□□□□□ -0.44
NFKB1-201ENST00000226574 ABHD16AO95870 558 aa12.29□□□□□ -0.44
NFKB1-201ENST00000226574 PNPP00491 289 aa12.29□□□□□ -0.44
NFKB1-201ENST00000226574 NFYBP25208 207 aa12.29□□□□□ -0.44
NFKB1-201ENST00000226574 NKX2-1P43699 371 aaPredicted RBP12.29□□□□□ -0.44
NFKB1-201ENST00000226574 RRADP55042 308 aa12.29□□□□□ -0.44
NFKB1-201ENST00000226574 MLF1P58340 268 aa12.29□□□□□ -0.44
NFKB1-201ENST00000226574 MYBPHQ13203 477 aa12.29□□□□□ -0.44
NFKB1-201ENST00000226574 PDCD11Q14690 1871 aaKnown RBP12.29□□□□□ -0.44
NFKB1-201ENST00000226574 MOGAT2Q3SYC2 334 aa12.29□□□□□ -0.44
NFKB1-201ENST00000226574 SLC38A9Q8NBW4 561 aa12.29□□□□□ -0.44
NFKB1-201ENST00000226574 OR5M8Q8NGP6 311 aa12.29□□□□□ -0.44
NFKB1-201ENST00000226574 HPSE2Q8WWQ2 592 aa12.29□□□□□ -0.44
NFKB1-201ENST00000226574 ASB5Q8WWX0 329 aa12.29□□□□□ -0.44
NFKB1-201ENST00000226574 GNG13Q9P2W3 67 aa12.29□□□□□ -0.44
NFKB1-201ENST00000226574 HMSDA8MTL9 139 aa12.28□□□□□ -0.44
NFKB1-201ENST00000226574 ZNHIT1O43257 154 aa12.28□□□□□ -0.44
NFKB1-201ENST00000226574 SSSCA1O60232 199 aa12.28□□□□□ -0.44
NFKB1-201ENST00000226574 MRPL33O75394 65 aaKnown RBP12.28□□□□□ -0.44
NFKB1-201ENST00000226574 H2AFB1P0C5Y9 115 aa12.28□□□□□ -0.44
NFKB1-201ENST00000226574 CPN1P15169 458 aa12.28□□□□□ -0.44
NFKB1-201ENST00000226574 MECP2P51608 486 aaKnown RBP12.28□□□□□ -0.44
NFKB1-201ENST00000226574 GUCA2BQ16661 112 aa12.28□□□□□ -0.44
NFKB1-201ENST00000226574 RPUSD3Q6P087 351 aaKnown RBP12.28□□□□□ -0.44
NFKB1-201ENST00000226574 DOK3Q7L591 496 aa12.28□□□□□ -0.44
NFKB1-201ENST00000226574 LGI3Q8N145 548 aa12.28□□□□□ -0.44
NFKB1-201ENST00000226574 C17orf78Q8N4C9 275 aa12.28□□□□□ -0.44
NFKB1-201ENST00000226574 ROBO4Q8WZ75 1007 aa12.28□□□□□ -0.44
NFKB1-201ENST00000226574 VN1R1Q9GZP7 353 aa12.28□□□□□ -0.44
NFKB1-201ENST00000226574 OBP2AQ9NY56 170 aa12.28□□□□□ -0.44
NFKB1-201ENST00000226574 MRPS18BQ9Y676 258 aaKnown RBP12.28□□□□□ -0.44
NFKB1-201ENST00000226574 A0A1W2PPC4 97 aa12.28□□□□□ -0.44
NFKB1-201ENST00000226574 GSTZ1O43708 216 aaPredicted RBP12.28□□□□□ -0.44
NFKB1-201ENST00000226574 JTBO76095 146 aa12.28□□□□□ -0.44
NFKB1-201ENST00000226574 MIDNQ504T8 468 aa12.28□□□□□ -0.44
NFKB1-201ENST00000226574 CST9LP1Q5W188 147 aa12.28□□□□□ -0.44
NFKB1-201ENST00000226574 LHFPL5Q8TAF8 219 aa12.28□□□□□ -0.44
NFKB1-201ENST00000226574 APOBEC4Q8WW27 367 aaKnown RBP12.28□□□□□ -0.44
NFKB1-201ENST00000226574 CDCA3Q99618 268 aaPredicted RBP12.28□□□□□ -0.44
NFKB1-201ENST00000226574 PLK3Q9H4B4 646 aa12.28□□□□□ -0.44
NFKB1-201ENST00000226574 GCM1Q9NP62 436 aa12.28□□□□□ -0.44
NFKB1-201ENST00000226574 MGAMO43451 1857 aa12.28□□□□□ -0.44
NFKB1-201ENST00000226574 A0A087WZY1 265 aa12.28□□□□□ -0.44
NFKB1-201ENST00000226574 WDR1O75083 606 aa12.28□□□□□ -0.44
NFKB1-201ENST00000226574 AQP8O94778 261 aa12.28□□□□□ -0.44
NFKB1-201ENST00000226574 B4GALT1P15291 398 aa12.28□□□□□ -0.44
NFKB1-201ENST00000226574 APOBEC1P41238 236 aaKnown RBP12.28□□□□□ -0.44
NFKB1-201ENST00000226574 ADIRFQ15847 76 aa12.28□□□□□ -0.44
NFKB1-201ENST00000226574 ZNF660Q6AZW8 331 aaPredicted RBP12.28□□□□□ -0.44
NFKB1-201ENST00000226574 OPN5Q6U736 354 aa12.28□□□□□ -0.44
NFKB1-201ENST00000226574 FAAP24Q9BTP7 215 aa12.28□□□□□ -0.44
NFKB1-201ENST00000226574 ZNF646O15015 1829 aaPredicted RBP12.28□□□□□ -0.44
NFKB1-201ENST00000226574 DOPEY2Q9Y3R5 2298 aa12.27□□□□□ -0.44
NFKB1-201ENST00000226574 TMEM218A2RU14 115 aa12.27□□□□□ -0.44
NFKB1-201ENST00000226574 HPNP05981 417 aa12.27□□□□□ -0.44
NFKB1-201ENST00000226574 IL9P15248 144 aa12.27□□□□□ -0.44
NFKB1-201ENST00000226574 ZP1P60852 638 aa12.27□□□□□ -0.44
NFKB1-201ENST00000226574 SLC35A1P78382 337 aa12.27□□□□□ -0.44
NFKB1-201ENST00000226574 C2orf68Q2NKX9 166 aa12.27□□□□□ -0.44
NFKB1-201ENST00000226574 ZNF684Q5T5D7 378 aa12.27□□□□□ -0.44
NFKB1-201ENST00000226574 ATG4DQ86TL0 474 aaPredicted RBP12.27□□□□□ -0.44
NFKB1-201ENST00000226574 OR5AS1Q8N127 324 aa12.27□□□□□ -0.44
NFKB1-201ENST00000226574 OR56B2PQ8NGI1 322 aa12.27□□□□□ -0.44
NFKB1-201ENST00000226574 SNIP1Q8TAD8 396 aaKnown RBP12.27□□□□□ -0.44
NFKB1-201ENST00000226574 HGDQ93099 445 aa12.27□□□□□ -0.44
NFKB1-201ENST00000226574 ESRP2Q9H6T0 727 aaKnown RBP12.27□□□□□ -0.44
NFKB1-201ENST00000226574 GAB2Q9UQC2 676 aa12.27□□□□□ -0.44
NFKB1-201ENST00000226574 CEBPZOSA8MTT3 80 aa12.27□□□□□ -0.45
NFKB1-201ENST00000226574 K7EQS6 105 aa12.27□□□□□ -0.45
NFKB1-201ENST00000226574 ONECUT2O95948 504 aa12.27□□□□□ -0.45
NFKB1-201ENST00000226574 SERPINA7P05543 415 aa12.27□□□□□ -0.45
NFKB1-201ENST00000226574 EIF2S3P41091 472 aaKnown RBP12.27□□□□□ -0.45
NFKB1-201ENST00000226574 FZD2Q14332 565 aa12.27□□□□□ -0.45
NFKB1-201ENST00000226574 ZNF141Q15928 474 aa12.27□□□□□ -0.45
NFKB1-201ENST00000226574 LINC00696Q6ZRV3 163 aa12.27□□□□□ -0.45
NFKB1-201ENST00000226574 SLC25A26Q70HW3 274 aa12.27□□□□□ -0.45
NFKB1-201ENST00000226574 OR10G3Q8NGC4 313 aa12.27□□□□□ -0.45
NFKB1-201ENST00000226574 MPDZO75970 2070 aa12.27□□□□□ -0.45
NFKB1-201ENST00000226574 CXorf51AA0A1B0GTR3 108 aa12.27□□□□□ -0.45
NFKB1-201ENST00000226574 SHOXO15266 292 aa12.27□□□□□ -0.45
NFKB1-201ENST00000226574 HMGB3O15347 200 aaKnown RBP12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms