RNA–Protein interactions for RNA: ENST00000225742.13

SMARCD2-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 1 (best) BASIC

Gene SMARCD2, Length 1,800 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-201ENST00000225742 CCDC120Q96HB5 630 aa19.34■□□□□ 0.69
SMARCD2-201ENST00000225742 SF3B5Q9BWJ5 86 aaKnown RBP19.34■□□□□ 0.69
SMARCD2-201ENST00000225742 PPA2Q9H2U2 334 aa19.34■□□□□ 0.69
SMARCD2-201ENST00000225742 CBR3O75828 277 aa19.33■□□□□ 0.69
SMARCD2-201ENST00000225742 SPDEFO95238 335 aa19.33■□□□□ 0.69
SMARCD2-201ENST00000225742 HPP00738 406 aa19.33■□□□□ 0.69
SMARCD2-201ENST00000225742 CFIP05156 583 aa19.33■□□□□ 0.69
SMARCD2-201ENST00000225742 OTX1P32242 354 aaPredicted RBP19.33■□□□□ 0.69
SMARCD2-201ENST00000225742 TMEM50BP56557 158 aa19.33■□□□□ 0.69
SMARCD2-201ENST00000225742 CYCSP99999 105 aaKnown RBP19.33■□□□□ 0.69
SMARCD2-201ENST00000225742 PPA1Q15181 289 aa19.33■□□□□ 0.69
SMARCD2-201ENST00000225742 NSUN5P2Q63ZY6 315 aa19.33■□□□□ 0.69
SMARCD2-201ENST00000225742 TMEM17Q86X19 198 aa19.33■□□□□ 0.69
SMARCD2-201ENST00000225742 OR1S1Q8NH92 325 aa19.33■□□□□ 0.69
SMARCD2-201ENST00000225742 PPP1R1CQ8WVI7 109 aa19.33■□□□□ 0.69
SMARCD2-201ENST00000225742 CDC6Q99741 560 aa19.33■□□□□ 0.69
SMARCD2-201ENST00000225742 PIGQQ9BRB3 760 aa19.33■□□□□ 0.69
SMARCD2-201ENST00000225742 MTRF1O75570 445 aaKnown RBP19.32■□□□□ 0.68
SMARCD2-201ENST00000225742 LIPCP11150 499 aa19.32■□□□□ 0.68
SMARCD2-201ENST00000225742 TDGF1P13385 188 aa19.32■□□□□ 0.68
SMARCD2-201ENST00000225742 PTGFRP43088 359 aa19.32■□□□□ 0.68
SMARCD2-201ENST00000225742 KISS1Q15726 138 aa19.32■□□□□ 0.68
SMARCD2-201ENST00000225742 TMEM128Q5BJH2 165 aa19.32■□□□□ 0.68
SMARCD2-201ENST00000225742 ADAD2Q8NCV1 583 aaKnown RBP19.32■□□□□ 0.68
SMARCD2-201ENST00000225742 LYZL4Q96KX0 146 aa19.32■□□□□ 0.68
SMARCD2-201ENST00000225742 VRK1Q99986 396 aaPredicted RBP19.32■□□□□ 0.68
SMARCD2-201ENST00000225742 DNTTIP1Q9H147 329 aa19.32■□□□□ 0.68
SMARCD2-201ENST00000225742 BANF2Q9H503 90 aa19.32■□□□□ 0.68
SMARCD2-201ENST00000225742 RASL12Q9NYN1 266 aa19.32■□□□□ 0.68
SMARCD2-201ENST00000225742 FOXD3Q9UJU5 478 aaPredicted RBP19.32■□□□□ 0.68
SMARCD2-201ENST00000225742 GPR132Q9UNW8 380 aa19.32■□□□□ 0.68
SMARCD2-201ENST00000225742 SPEF1Q9Y4P9 236 aa19.32■□□□□ 0.68
SMARCD2-201ENST00000225742 LOC100509620A0A075B734 347 aa19.32■□□□□ 0.68
SMARCD2-201ENST00000225742 FOXI3A8MTJ6 420 aaPredicted RBP19.32■□□□□ 0.68
SMARCD2-201ENST00000225742 WDPCPO95876 746 aa19.32■□□□□ 0.68
SMARCD2-201ENST00000225742 RLN2P04090 185 aa19.32■□□□□ 0.68
SMARCD2-201ENST00000225742 CD63P08962 238 aa19.32■□□□□ 0.68
SMARCD2-201ENST00000225742 AKR1C4P17516 323 aa19.32■□□□□ 0.68
SMARCD2-201ENST00000225742 VAMP1P23763 118 aa19.32■□□□□ 0.68
SMARCD2-201ENST00000225742 DLSTP36957 453 aa19.32■□□□□ 0.68
SMARCD2-201ENST00000225742 PHYHD1Q5SRE7 291 aa19.32■□□□□ 0.68
SMARCD2-201ENST00000225742 SLC16A14Q7RTX9 510 aa19.32■□□□□ 0.68
SMARCD2-201ENST00000225742 C20orf196Q8IYI0 205 aa19.32■□□□□ 0.68
SMARCD2-201ENST00000225742 MAML2Q8IZL2 1156 aaPredicted RBP19.32■□□□□ 0.68
SMARCD2-201ENST00000225742 TMEM156Q8N614 296 aa19.32■□□□□ 0.68
SMARCD2-201ENST00000225742 BVESQ8NE79 360 aa19.32■□□□□ 0.68
SMARCD2-201ENST00000225742 OR5H2Q8NGV7 314 aa19.32■□□□□ 0.68
SMARCD2-201ENST00000225742 MARCH1Q8TCQ1 289 aa19.32■□□□□ 0.68
SMARCD2-201ENST00000225742 SPTSSAQ969W0 71 aa19.32■□□□□ 0.68
SMARCD2-201ENST00000225742 TM2D1Q9BX74 207 aa19.32■□□□□ 0.68
SMARCD2-201ENST00000225742 NMES1Q9C002 83 aa19.32■□□□□ 0.68
SMARCD2-201ENST00000225742 FN3KRPQ9HA64 309 aa19.32■□□□□ 0.68
SMARCD2-201ENST00000225742 HPF1Q9NWY4 346 aa19.32■□□□□ 0.68
SMARCD2-201ENST00000225742 GLS2Q9UI32 602 aa19.32■□□□□ 0.68
SMARCD2-201ENST00000225742 SDK1Q7Z5N4 2213 aa19.32■□□□□ 0.68
SMARCD2-201ENST00000225742 EML6Q6ZMW3 1958 aa19.31■□□□□ 0.68
SMARCD2-201ENST00000225742 NSG1A0A0A6YYJ2 146 aa19.31■□□□□ 0.68
SMARCD2-201ENST00000225742 CCSO14618 274 aa19.31■□□□□ 0.68
SMARCD2-201ENST00000225742 CER1O95813 267 aa19.31■□□□□ 0.68
SMARCD2-201ENST00000225742 GP1BAP07359 652 aa19.31■□□□□ 0.68
SMARCD2-201ENST00000225742 FPR2P25090 351 aa19.31■□□□□ 0.68
SMARCD2-201ENST00000225742 FOLR3P41439 243 aa19.31■□□□□ 0.68
SMARCD2-201ENST00000225742 ATP1B3P54709 279 aa19.31■□□□□ 0.68
SMARCD2-201ENST00000225742 TAS2R46P59540 309 aa19.31■□□□□ 0.68
SMARCD2-201ENST00000225742 MRPS34P82930 218 aaKnown RBP19.31■□□□□ 0.68
SMARCD2-201ENST00000225742 GFOD2Q3B7J2 385 aa19.31■□□□□ 0.68
SMARCD2-201ENST00000225742 GALNT11Q8NCW6 608 aa19.31■□□□□ 0.68
SMARCD2-201ENST00000225742 PXT1Q8NFP0 134 aa19.31■□□□□ 0.68
SMARCD2-201ENST00000225742 OR51T1Q8NGJ9 327 aa19.31■□□□□ 0.68
SMARCD2-201ENST00000225742 OR2I1PQ8NGU4 316 aa19.31■□□□□ 0.68
SMARCD2-201ENST00000225742 ARHGAP5-AS1Q96IT6 56 aa19.31■□□□□ 0.68
SMARCD2-201ENST00000225742 SEC22AQ96IW7 307 aa19.31■□□□□ 0.68
SMARCD2-201ENST00000225742 SGCZQ96LD1 299 aa19.31■□□□□ 0.68
SMARCD2-201ENST00000225742 GNRHR2Q96P88 292 aa19.31■□□□□ 0.68
SMARCD2-201ENST00000225742 ZNF385AQ96PM9 386 aaKnown RBP19.31■□□□□ 0.68
SMARCD2-201ENST00000225742 CHST5Q9GZS9 411 aa19.31■□□□□ 0.68
SMARCD2-201ENST00000225742 PCDHGA1Q9Y5H4 931 aa19.31■□□□□ 0.68
SMARCD2-201ENST00000225742 ARFRP1Q13795 201 aa19.3■□□□□ 0.68
SMARCD2-201ENST00000225742 FAM27BQ5VT28 67 aa19.3■□□□□ 0.68
SMARCD2-201ENST00000225742 INO80EQ8NBZ0 244 aaPredicted RBP19.3■□□□□ 0.68
SMARCD2-201ENST00000225742 LINC00052Q96N35 136 aa19.3■□□□□ 0.68
SMARCD2-201ENST00000225742 RNF222A6NCQ9 220 aa19.3■□□□□ 0.68
SMARCD2-201ENST00000225742 DHRS7CA6NNS2 312 aa19.3■□□□□ 0.68
SMARCD2-201ENST00000225742 POM121CA8CG34 1229 aa19.3■□□□□ 0.68
SMARCD2-201ENST00000225742 RAD51DO75771 328 aa19.3■□□□□ 0.68
SMARCD2-201ENST00000225742 AMY2BP19961 511 aa19.3■□□□□ 0.68
SMARCD2-201ENST00000225742 AVPR2P30518 371 aa19.3■□□□□ 0.68
SMARCD2-201ENST00000225742 SLC6A9P48067 706 aa19.3■□□□□ 0.68
SMARCD2-201ENST00000225742 PEG10Q86TG7 708 aaKnown RBP19.3■□□□□ 0.68
SMARCD2-201ENST00000225742 OR52H1Q8NGJ2 320 aa19.3■□□□□ 0.68
SMARCD2-201ENST00000225742 CASTOR1Q8WTX7 329 aa19.3■□□□□ 0.68
SMARCD2-201ENST00000225742 KCNE4Q8WWG9 221 aa19.3■□□□□ 0.68
SMARCD2-201ENST00000225742 RBM24Q9BX46 236 aaKnown RBP19.3■□□□□ 0.68
SMARCD2-201ENST00000225742 ULBP2Q9BZM5 246 aa19.3■□□□□ 0.68
SMARCD2-201ENST00000225742 OR5H15A6NDH6 313 aa19.29■□□□□ 0.68
SMARCD2-201ENST00000225742 SERPINE3A8MV23 424 aa19.29■□□□□ 0.68
SMARCD2-201ENST00000225742 E9PLN8 166 aa19.29■□□□□ 0.68
SMARCD2-201ENST00000225742 F5H5K5 113 aa19.29■□□□□ 0.68
SMARCD2-201ENST00000225742 SCO1O75880 301 aa19.29■□□□□ 0.68
SMARCD2-201ENST00000225742 SFT2D2O95562 160 aa19.29■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms