RNA–Protein interactions for RNA: ENST00000219689.11

USP31-201, Transcript of ubiquitin specific peptidase 31, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP31, Length 10,699 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP31-201ENST00000219689 Q9N2K0 584 aa10.06□□□□□ -0.8
USP31-201ENST00000219689 CCDC168Q8NDH2 2452 aa10.06□□□□□ -0.8
USP31-201ENST00000219689 ABCD4O14678 606 aa10.06□□□□□ -0.8
USP31-201ENST00000219689 OPRM1P35372 400 aa10.06□□□□□ -0.8
USP31-201ENST00000219689 SSX1Q16384 188 aa10.06□□□□□ -0.8
USP31-201ENST00000219689 DCXRQ7Z4W1 244 aa10.06□□□□□ -0.8
USP31-201ENST00000219689 SEH1LQ96EE3 360 aa10.06□□□□□ -0.8
USP31-201ENST00000219689 TRMT61AQ96FX7 289 aaKnown RBP10.06□□□□□ -0.8
USP31-201ENST00000219689 PSME4Q14997 1843 aa10.06□□□□□ -0.8
USP31-201ENST00000219689 NDUFB7P17568 137 aa10.06□□□□□ -0.8
USP31-201ENST00000219689 LANCL3Q6ZV70 420 aa10.06□□□□□ -0.8
USP31-201ENST00000219689 ERGIC1Q969X5 290 aa10.06□□□□□ -0.8
USP31-201ENST00000219689 MRPS24Q96EL2 167 aaKnown RBP10.06□□□□□ -0.8
USP31-201ENST00000219689 RAB33BQ9H082 229 aa10.06□□□□□ -0.8
USP31-201ENST00000219689 MBD1Q9UIS9 605 aaPredicted RBP10.06□□□□□ -0.8
USP31-201ENST00000219689 SLC22A20A6NK97 555 aa10.06□□□□□ -0.8
USP31-201ENST00000219689 TGM5O43548 720 aa10.06□□□□□ -0.8
USP31-201ENST00000219689 PRKRAO75569 313 aaKnown RBP10.06□□□□□ -0.8
USP31-201ENST00000219689 PPP1R1AQ13522 171 aa10.06□□□□□ -0.8
USP31-201ENST00000219689 ELAVL3Q14576 367 aaKnown RBP10.06□□□□□ -0.8
USP31-201ENST00000219689 ASB16Q96NS5 453 aa10.06□□□□□ -0.8
USP31-201ENST00000219689 IKZF5Q9H5V7 419 aa10.06□□□□□ -0.8
USP31-201ENST00000219689 EOMESO95936 686 aa10.06□□□□□ -0.8
USP31-201ENST00000219689 AGBL4Q5VU57 503 aa10.06□□□□□ -0.8
USP31-201ENST00000219689 TMEM207Q6UWW9 146 aa10.06□□□□□ -0.8
USP31-201ENST00000219689 ADOQ96SZ5 270 aa10.06□□□□□ -0.8
USP31-201ENST00000219689 V9GYH0 126 aa10.06□□□□□ -0.8
USP31-201ENST00000219689 CSN1S1P47710 185 aa10.06□□□□□ -0.8
USP31-201ENST00000219689 GNG4P50150 75 aa10.06□□□□□ -0.8
USP31-201ENST00000219689 IHHQ14623 411 aa10.06□□□□□ -0.8
USP31-201ENST00000219689 DEFB110Q30KQ9 67 aa10.06□□□□□ -0.8
USP31-201ENST00000219689 Q56UQ5 140 aa10.06□□□□□ -0.8
USP31-201ENST00000219689 TEAD3Q99594 435 aa10.06□□□□□ -0.8
USP31-201ENST00000219689 SLC46A2Q9BY10 475 aa10.06□□□□□ -0.8
USP31-201ENST00000219689 TNFRSF12AQ9NP84 129 aa10.06□□□□□ -0.8
USP31-201ENST00000219689 FBXL17Q9UF56 701 aa10.06□□□□□ -0.8
USP31-201ENST00000219689 BDP1A6H8Y1 2624 aa10.06□□□□□ -0.8
USP31-201ENST00000219689 FCMRO60667 390 aa10.05□□□□□ -0.8
USP31-201ENST00000219689 HAND1O96004 215 aa10.05□□□□□ -0.8
USP31-201ENST00000219689 HIST1H1CP16403 213 aaKnown RBP10.05□□□□□ -0.8
USP31-201ENST00000219689 HLA-DRB5Q30154 266 aa10.05□□□□□ -0.8
USP31-201ENST00000219689 ACER2Q5QJU3 275 aa10.05□□□□□ -0.8
USP31-201ENST00000219689 MMP21Q8N119 569 aa10.05□□□□□ -0.8
USP31-201ENST00000219689 SLC38A9Q8NBW4 561 aa10.05□□□□□ -0.8
USP31-201ENST00000219689 SMIM14Q96QK8 99 aa10.05□□□□□ -0.8
USP31-201ENST00000219689 PECRQ9BY49 303 aa10.05□□□□□ -0.8
USP31-201ENST00000219689 ARID2Q68CP9 1835 aa10.05□□□□□ -0.8
USP31-201ENST00000219689 RPL11P62913 178 aaKnown RBP10.05□□□□□ -0.8
USP31-201ENST00000219689 RUNX2Q13950 521 aa10.05□□□□□ -0.8
USP31-201ENST00000219689 SLC35D3Q5M8T2 416 aa10.05□□□□□ -0.8
USP31-201ENST00000219689 PPP1R35Q8TAP8 253 aa10.05□□□□□ -0.8
USP31-201ENST00000219689 ATOH1Q92858 354 aaPredicted RBP10.05□□□□□ -0.8
USP31-201ENST00000219689 HGDQ93099 445 aa10.05□□□□□ -0.8
USP31-201ENST00000219689 TSACCQ96A04 125 aaPredicted RBP10.05□□□□□ -0.8
USP31-201ENST00000219689 JAM3Q9BX67 310 aa10.05□□□□□ -0.8
USP31-201ENST00000219689 WNT6Q9Y6F9 365 aa10.05□□□□□ -0.8
USP31-201ENST00000219689 OR5B21A6NL26 309 aa10.05□□□□□ -0.8
USP31-201ENST00000219689 C17orf105B2RV13 164 aa10.05□□□□□ -0.8
USP31-201ENST00000219689 B4DEV8 164 aa10.05□□□□□ -0.8
USP31-201ENST00000219689 HLA-DRB3P79483 266 aa10.05□□□□□ -0.8
USP31-201ENST00000219689 ING1Q9UK53 422 aaPredicted RBP10.05□□□□□ -0.8
USP31-201ENST00000219689 FOXJ3Q9UPW0 622 aa10.05□□□□□ -0.8
USP31-201ENST00000219689 H3BP45 60 aa10.05□□□□□ -0.8
USP31-201ENST00000219689 ADRA1AP35348 466 aa10.05□□□□□ -0.8
USP31-201ENST00000219689 CTSCP53634 463 aa10.05□□□□□ -0.8
USP31-201ENST00000219689 FOXK1P85037 733 aa10.05□□□□□ -0.8
USP31-201ENST00000219689 NKAIN1Q4KMZ8 207 aa10.05□□□□□ -0.8
USP31-201ENST00000219689 OR51F2Q8NH61 342 aa10.05□□□□□ -0.8
USP31-201ENST00000219689 OBP2BQ9NPH6 170 aa10.05□□□□□ -0.8
USP31-201ENST00000219689 CACNA1AO00555 2505 aa10.05□□□□□ -0.8
USP31-201ENST00000219689 DDX60LQ5H9U9 1706 aaKnown RBP10.05□□□□□ -0.8
USP31-201ENST00000219689 DUXBA0A1W2PPF3 345 aa10.05□□□□□ -0.8
USP31-201ENST00000219689 TIMP2P16035 220 aa10.05□□□□□ -0.8
USP31-201ENST00000219689 C16orf82Q7Z2V1 217 aa10.05□□□□□ -0.8
USP31-201ENST00000219689 ALKBH7Q9BT30 221 aaPredicted RBP10.05□□□□□ -0.8
USP31-201ENST00000219689 OR4C46A6NHA9 309 aa10.05□□□□□ -0.8
USP31-201ENST00000219689 SEMA4FO95754 770 aa10.05□□□□□ -0.8
USP31-201ENST00000219689 SPCS3P61009 180 aa10.05□□□□□ -0.8
USP31-201ENST00000219689 RAC1P63000 192 aa10.05□□□□□ -0.8
USP31-201ENST00000219689 PQLC2LA1A4F0 135 aa10.05□□□□□ -0.8
USP31-201ENST00000219689 NPIPB15A6NHN6 443 aaPredicted RBP10.05□□□□□ -0.8
USP31-201ENST00000219689 ZNF385BQ569K4 471 aa10.05□□□□□ -0.8
USP31-201ENST00000219689 ABI3BPQ7Z7G0 1075 aa10.05□□□□□ -0.8
USP31-201ENST00000219689 PGBD5Q8N414 524 aa10.05□□□□□ -0.8
USP31-201ENST00000219689 TMEM251Q8N6I4 163 aa10.05□□□□□ -0.8
USP31-201ENST00000219689 MRIQ9BWK5 157 aa10.05□□□□□ -0.8
USP31-201ENST00000219689 GLIPR2Q9H4G4 154 aa10.05□□□□□ -0.8
USP31-201ENST00000219689 CLEC18AA5D8T8 446 aa10.05□□□□□ -0.8
USP31-201ENST00000219689 MFNGO00587 321 aa10.05□□□□□ -0.8
USP31-201ENST00000219689 CTSAP10619 480 aa10.05□□□□□ -0.8
USP31-201ENST00000219689 TBPP20226 339 aa10.05□□□□□ -0.8
USP31-201ENST00000219689 SIRT6Q8N6T7 355 aa10.05□□□□□ -0.8
USP31-201ENST00000219689 CLEC18CQ8NCF0 446 aa10.05□□□□□ -0.8
USP31-201ENST00000219689 OR52L2PQ8NGH6 319 aa10.05□□□□□ -0.8
USP31-201ENST00000219689 CTSSP25774 331 aa10.04□□□□□ -0.8
USP31-201ENST00000219689 TFAP2EQ6VUC0 442 aa10.04□□□□□ -0.8
USP31-201ENST00000219689 MRPL13Q9BYD1 178 aaKnown RBP10.04□□□□□ -0.8
USP31-201ENST00000219689 GNB4Q9HAV0 340 aa10.04□□□□□ -0.8
USP31-201ENST00000219689 FOXE1O00358 373 aaPredicted RBP10.04□□□□□ -0.8
USP31-201ENST00000219689 C9orf131Q5VYM1 1079 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms