RNA–Protein interactions for RNA: ENST00000219334.9

SMPD3-201, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPD3, Length 5,453 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-201ENST00000219334 TGM1P22735 817 aa16.99■□□□□ 0.31
SMPD3-201ENST00000219334 DMRTC1Q5HYR2 192 aa16.99■□□□□ 0.31
SMPD3-201ENST00000219334 KCNRGQ8N5I3 272 aa16.99■□□□□ 0.31
SMPD3-201ENST00000219334 AK3Q9UIJ7 227 aa16.99■□□□□ 0.31
SMPD3-201ENST00000219334 SERTM1A2A2V5 107 aa16.99■□□□□ 0.31
SMPD3-201ENST00000219334 KRBOX1C9JBD0 128 aa16.99■□□□□ 0.31
SMPD3-201ENST00000219334 TBX19O60806 448 aa16.99■□□□□ 0.31
SMPD3-201ENST00000219334 PRICKLE4Q2TBC4 344 aa16.99■□□□□ 0.31
SMPD3-201ENST00000219334 TIGITQ495A1 244 aa16.99■□□□□ 0.31
SMPD3-201ENST00000219334 FGF20Q9NP95 211 aaPredicted RBP16.99■□□□□ 0.31
SMPD3-201ENST00000219334 GLRX2Q9NS18 164 aa16.99■□□□□ 0.31
SMPD3-201ENST00000219334 A0A1B0GTL3 188 aa16.98■□□□□ 0.31
SMPD3-201ENST00000219334 A0A1B0GUL6 1792 aa16.98■□□□□ 0.31
SMPD3-201ENST00000219334 PI3P19957 117 aa16.98■□□□□ 0.31
SMPD3-201ENST00000219334 PIGPP57054 158 aa16.98■□□□□ 0.31
SMPD3-201ENST00000219334 WDR74Q6RFH5 385 aaPredicted RBP16.98■□□□□ 0.31
SMPD3-201ENST00000219334 RTN4IP1Q8WWV3 396 aaPredicted RBP16.98■□□□□ 0.31
SMPD3-201ENST00000219334 PSENENQ9NZ42 101 aa16.98■□□□□ 0.31
SMPD3-201ENST00000219334 FZR1Q9UM11 496 aa16.98■□□□□ 0.31
SMPD3-201ENST00000219334 FAHD1Q6P587 224 aa16.98■□□□□ 0.31
SMPD3-201ENST00000219334 BTNL3Q6UXE8 466 aa16.98■□□□□ 0.31
SMPD3-201ENST00000219334 NUFIP2Q7Z417 695 aaKnown RBP16.98■□□□□ 0.31
SMPD3-201ENST00000219334 RNF32Q9H0A6 362 aa16.98■□□□□ 0.31
SMPD3-201ENST00000219334 PNLIPRP3Q17RR3 467 aa16.98■□□□□ 0.31
SMPD3-201ENST00000219334 PABPC1L2AQ5JQF8 200 aa16.98■□□□□ 0.31
SMPD3-201ENST00000219334 OR8U1Q8NH10 309 aa16.98■□□□□ 0.31
SMPD3-201ENST00000219334 TAF1P21675 1872 aa16.98■□□□□ 0.31
SMPD3-201ENST00000219334 ZNF724A8MTY0 619 aa16.98■□□□□ 0.31
SMPD3-201ENST00000219334 M0R1X1 148 aa16.98■□□□□ 0.31
SMPD3-201ENST00000219334 MBP02144 154 aa16.98■□□□□ 0.31
SMPD3-201ENST00000219334 CA6P23280 308 aa16.98■□□□□ 0.31
SMPD3-201ENST00000219334 UCNP55089 124 aa16.98■□□□□ 0.31
SMPD3-201ENST00000219334 ZNF816Q0VGE8 651 aaPredicted RBP16.98■□□□□ 0.31
SMPD3-201ENST00000219334 SPINK14Q6IE38 97 aa16.98■□□□□ 0.31
SMPD3-201ENST00000219334 PTDSS2Q9BVG9 487 aa16.98■□□□□ 0.31
SMPD3-201ENST00000219334 TIMM9Q9Y5J7 89 aa16.98■□□□□ 0.31
SMPD3-201ENST00000219334 TCRBV5S2A0A599 114 aa16.97■□□□□ 0.31
SMPD3-201ENST00000219334 CYTIPO60759 359 aa16.97■□□□□ 0.31
SMPD3-201ENST00000219334 SBK3P0C264 359 aa16.97■□□□□ 0.31
SMPD3-201ENST00000219334 CTRB1P17538 263 aa16.97■□□□□ 0.31
SMPD3-201ENST00000219334 CTRB2Q6GPI1 263 aa16.97■□□□□ 0.31
SMPD3-201ENST00000219334 FOXJ3Q9UPW0 622 aa16.97■□□□□ 0.31
SMPD3-201ENST00000219334 ZNF32P17041 273 aa16.97■□□□□ 0.31
SMPD3-201ENST00000219334 TMUB2Q71RG4 321 aa16.97■□□□□ 0.31
SMPD3-201ENST00000219334 LYSMD2Q8IV50 215 aa16.97■□□□□ 0.31
SMPD3-201ENST00000219334 COX14Q96I36 57 aa16.97■□□□□ 0.31
SMPD3-201ENST00000219334 TSTD3H0UI37 97 aa16.97■□□□□ 0.31
SMPD3-201ENST00000219334 COX7A2P2O60397 106 aa16.97■□□□□ 0.31
SMPD3-201ENST00000219334 CCL4P13236 92 aa16.97■□□□□ 0.31
SMPD3-201ENST00000219334 TMPRSS11FQ6ZWK6 438 aa16.97■□□□□ 0.31
SMPD3-201ENST00000219334 TM4SF19Q96DZ7 209 aa16.97■□□□□ 0.31
SMPD3-201ENST00000219334 COLQQ9Y215 455 aaPredicted RBP16.97■□□□□ 0.31
SMPD3-201ENST00000219334 NUDT19A8MXV4 375 aa16.97■□□□□ 0.31
SMPD3-201ENST00000219334 NGFP01138 241 aa16.97■□□□□ 0.31
SMPD3-201ENST00000219334 GIPP09681 153 aaPredicted RBP16.97■□□□□ 0.31
SMPD3-201ENST00000219334 COX5AP20674 150 aa16.97■□□□□ 0.31
SMPD3-201ENST00000219334 FABP5Q01469 135 aa16.97■□□□□ 0.31
SMPD3-201ENST00000219334 ZNF835Q9Y2P0 537 aa16.97■□□□□ 0.31
SMPD3-201ENST00000219334 ASCC3Q8N3C0 2202 aaKnown RBP16.97■□□□□ 0.31
SMPD3-201ENST00000219334 E5RGE8 158 aa16.97■□□□□ 0.31
SMPD3-201ENST00000219334 H0Y8G0 127 aa16.97■□□□□ 0.31
SMPD3-201ENST00000219334 MNX1P50219 401 aaPredicted RBP16.97■□□□□ 0.31
SMPD3-201ENST00000219334 SLC25A1P53007 311 aa16.97■□□□□ 0.31
SMPD3-201ENST00000219334 OR5B3Q8NH48 314 aa16.97■□□□□ 0.31
SMPD3-201ENST00000219334 RNF167Q9H6Y7 350 aa16.97■□□□□ 0.31
SMPD3-201ENST00000219334 ISG20L2Q9H9L3 353 aaKnown RBP16.97■□□□□ 0.31
SMPD3-201ENST00000219334 NSG2Q9Y328 171 aa16.97■□□□□ 0.31
SMPD3-201ENST00000219334 MARCH1Q8TCQ1 289 aa16.96■□□□□ 0.31
SMPD3-201ENST00000219334 ERGIC1Q969X5 290 aa16.96■□□□□ 0.31
SMPD3-201ENST00000219334 AKR1E2Q96JD6 320 aa16.96■□□□□ 0.31
SMPD3-201ENST00000219334 TMEM56Q96MV1 263 aa16.96■□□□□ 0.31
SMPD3-201ENST00000219334 DUSP15Q9H1R2 295 aaPredicted RBP16.96■□□□□ 0.31
SMPD3-201ENST00000219334 CHEK1O14757 476 aa16.96■□□□□ 0.31
SMPD3-201ENST00000219334 OR13C7P0DN81 318 aa16.96■□□□□ 0.31
SMPD3-201ENST00000219334 MFSD4AQ8N468 514 aa16.96■□□□□ 0.31
SMPD3-201ENST00000219334 DUSP21Q9H596 190 aa16.96■□□□□ 0.31
SMPD3-201ENST00000219334 PLEKHA2Q9HB19 425 aa16.96■□□□□ 0.31
SMPD3-201ENST00000219334 CD3DP04234 171 aa16.96■□□□□ 0.31
SMPD3-201ENST00000219334 P2RX3P56373 397 aa16.96■□□□□ 0.31
SMPD3-201ENST00000219334 YBX1P67809 324 aaKnown RBP16.96■□□□□ 0.31
SMPD3-201ENST00000219334 PHYHD1Q5SRE7 291 aa16.96■□□□□ 0.31
SMPD3-201ENST00000219334 LCN15Q6UWW0 184 aa16.96■□□□□ 0.31
SMPD3-201ENST00000219334 RIMKLAQ8IXN7 391 aa16.96■□□□□ 0.31
SMPD3-201ENST00000219334 OR10V1Q8NGI7 309 aa16.96■□□□□ 0.31
SMPD3-201ENST00000219334 NUBPLQ8TB37 319 aa16.96■□□□□ 0.31
SMPD3-201ENST00000219334 LHX4Q969G2 390 aa16.96■□□□□ 0.31
SMPD3-201ENST00000219334 SLC35B4Q969S0 331 aa16.96■□□□□ 0.31
SMPD3-201ENST00000219334 MARC2Q969Z3 335 aa16.96■□□□□ 0.31
SMPD3-201ENST00000219334 PARP12Q9H0J9 701 aaKnown RBP16.96■□□□□ 0.31
SMPD3-201ENST00000219334 TAAR3PQ9P1P4 343 aa16.96■□□□□ 0.31
SMPD3-201ENST00000219334 CDX4O14627 284 aaPredicted RBP16.96■□□□□ 0.3
SMPD3-201ENST00000219334 XRCC3O43542 346 aa16.96■□□□□ 0.3
SMPD3-201ENST00000219334 ZNF774Q6NX45 483 aa16.96■□□□□ 0.3
SMPD3-201ENST00000219334 MOB1BQ7L9L4 216 aa16.96■□□□□ 0.3
SMPD3-201ENST00000219334 DUS3LQ96G46 650 aaKnown RBP16.96■□□□□ 0.3
SMPD3-201ENST00000219334 DHRS9Q9BPW9 319 aa16.96■□□□□ 0.3
SMPD3-201ENST00000219334 DNAJB12Q9NXW2 375 aaKnown RBP16.96■□□□□ 0.3
SMPD3-201ENST00000219334 ZNF785A8K8V0 405 aa16.95■□□□□ 0.3
SMPD3-201ENST00000219334 PSMB6P28072 239 aa16.95■□□□□ 0.3
SMPD3-201ENST00000219334 FMODQ06828 376 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms