RNA–Protein interactions for RNA: ENST00000216639.7

VRK1-201, Transcript of vaccinia related kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VRK1, Length 1,745 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-201ENST00000216639 ZNF260Q3ZCT1 412 aa15.15■□□□□ 0.02
VRK1-201ENST00000216639 FBXW9Q5XUX1 488 aa15.15■□□□□ 0.02
VRK1-201ENST00000216639 TCTE3Q8IZS6 198 aa15.15■□□□□ 0.02
VRK1-201ENST00000216639 CPEB3Q8NE35 698 aaKnown RBP15.15■□□□□ 0.02
VRK1-201ENST00000216639 OR4C16Q8NGL9 310 aa15.15■□□□□ 0.02
VRK1-201ENST00000216639 NPRL2Q8WTW4 380 aa15.15■□□□□ 0.02
VRK1-201ENST00000216639 GIMAP1Q8WWP7 306 aa15.15■□□□□ 0.02
VRK1-201ENST00000216639 SARAFQ96BY9 339 aa15.15■□□□□ 0.02
VRK1-201ENST00000216639 C1QTNF5Q9BXJ0 243 aa15.15■□□□□ 0.02
VRK1-201ENST00000216639 OR51J1Q9H342 316 aa15.15■□□□□ 0.02
VRK1-201ENST00000216639 GHITMQ9H3K2 345 aa15.15■□□□□ 0.02
VRK1-201ENST00000216639 NOX3Q9HBY0 568 aa15.15■□□□□ 0.02
VRK1-201ENST00000216639 FREM2Q5SZK8 3169 aa15.15■□□□□ 0.02
VRK1-201ENST00000216639 TMEM235A6NFC5 223 aa15.14■□□□□ 0.01
VRK1-201ENST00000216639 CRTAPO75718 401 aaPredicted RBP15.14■□□□□ 0.01
VRK1-201ENST00000216639 NDUFB6O95139 128 aa15.14■□□□□ 0.01
VRK1-201ENST00000216639 HLA-HP01893 362 aa15.14■□□□□ 0.01
VRK1-201ENST00000216639 CD79AP11912 226 aa15.14■□□□□ 0.01
VRK1-201ENST00000216639 CBX3Q13185 183 aa15.14■□□□□ 0.01
VRK1-201ENST00000216639 MAB21L1Q13394 359 aa15.14■□□□□ 0.01
VRK1-201ENST00000216639 RBMS2Q15434 407 aaKnown RBP15.14■□□□□ 0.01
VRK1-201ENST00000216639 CDNFQ49AH0 187 aa15.14■□□□□ 0.01
VRK1-201ENST00000216639 CLVS2Q5SYC1 327 aa15.14■□□□□ 0.01
VRK1-201ENST00000216639 FAAP20Q6NZ36 180 aa15.14■□□□□ 0.01
VRK1-201ENST00000216639 STEAP1BQ6NZ63 245 aa15.14■□□□□ 0.01
VRK1-201ENST00000216639 ZNF584Q8IVC4 421 aa15.14■□□□□ 0.01
VRK1-201ENST00000216639 GABRG1Q8N1C3 465 aa15.14■□□□□ 0.01
VRK1-201ENST00000216639 OR56B1Q8NGI3 324 aa15.14■□□□□ 0.01
VRK1-201ENST00000216639 TNFAIP8L1Q8WVP5 186 aa15.14■□□□□ 0.01
VRK1-201ENST00000216639 NANOS1Q8WY41 292 aaKnown RBP15.14■□□□□ 0.01
VRK1-201ENST00000216639 RNF170Q96K19 258 aa15.14■□□□□ 0.01
VRK1-201ENST00000216639 C1orf147Q96MC9 270 aaPredicted RBP15.14■□□□□ 0.01
VRK1-201ENST00000216639 LPAR5Q9H1C0 372 aa15.14■□□□□ 0.01
VRK1-201ENST00000216639 OR10A4Q9H209 315 aa15.14■□□□□ 0.01
VRK1-201ENST00000216639 TP63Q9H3D4 680 aaPredicted RBP15.14■□□□□ 0.01
VRK1-201ENST00000216639 ZMAT3Q9HA38 289 aaKnown RBP15.14■□□□□ 0.01
VRK1-201ENST00000216639 PRSS50Q9UI38 385 aa15.14■□□□□ 0.01
VRK1-201ENST00000216639 ING4Q9UNL4 249 aa15.14■□□□□ 0.01
VRK1-201ENST00000216639 SS18L1O75177 396 aaPredicted RBP15.14■□□□□ 0.01
VRK1-201ENST00000216639 MELTFP08582 738 aa15.14■□□□□ 0.01
VRK1-201ENST00000216639 ACKR3P25106 362 aa15.14■□□□□ 0.01
VRK1-201ENST00000216639 OR3A2P47893 321 aa15.14■□□□□ 0.01
VRK1-201ENST00000216639 ZNF169Q14929 603 aaPredicted RBP15.14■□□□□ 0.01
VRK1-201ENST00000216639 LINC00303Q3SY05 128 aa15.14■□□□□ 0.01
VRK1-201ENST00000216639 CD276Q5ZPR3 534 aa15.14■□□□□ 0.01
VRK1-201ENST00000216639 RNF144BQ7Z419 303 aa15.14■□□□□ 0.01
VRK1-201ENST00000216639 OR8S1Q8NH09 359 aa15.14■□□□□ 0.01
VRK1-201ENST00000216639 PIGTQ969N2 578 aa15.14■□□□□ 0.01
VRK1-201ENST00000216639 DMRTB1Q96MA1 342 aa15.14■□□□□ 0.01
VRK1-201ENST00000216639 TECTBQ96PL2 329 aa15.14■□□□□ 0.01
VRK1-201ENST00000216639 BEX2Q9BXY8 128 aa15.14■□□□□ 0.01
VRK1-201ENST00000216639 GPR173Q9NS66 373 aa15.14■□□□□ 0.01
VRK1-201ENST00000216639 hCG_38984A0A1B0GV85 526 aa15.13■□□□□ 0.01
VRK1-201ENST00000216639 ARPC1BO15143 372 aaKnown RBP15.13■□□□□ 0.01
VRK1-201ENST00000216639 KLK10O43240 276 aa15.13■□□□□ 0.01
VRK1-201ENST00000216639 CD3DP04234 171 aa15.13■□□□□ 0.01
VRK1-201ENST00000216639 GSTP1P09211 210 aaKnown RBP15.13■□□□□ 0.01
VRK1-201ENST00000216639 NAT2P11245 290 aa15.13■□□□□ 0.01
VRK1-201ENST00000216639 FOXG1P55316 489 aaPredicted RBP15.13■□□□□ 0.01
VRK1-201ENST00000216639 RAB1AP62820 205 aa15.13■□□□□ 0.01
VRK1-201ENST00000216639 KCNJ8Q15842 424 aa15.13■□□□□ 0.01
VRK1-201ENST00000216639 SLC22A6Q4U2R8 563 aa15.13■□□□□ 0.01
VRK1-201ENST00000216639 ZBTB37Q5TC79 503 aa15.13■□□□□ 0.01
VRK1-201ENST00000216639 METTL11BQ5VVY1 283 aa15.13■□□□□ 0.01
VRK1-201ENST00000216639 IGFL3Q6UXB1 125 aa15.13■□□□□ 0.01
VRK1-201ENST00000216639 COLCA1Q6ZS62 124 aa15.13■□□□□ 0.01
VRK1-201ENST00000216639 STEAP2Q8NFT2 490 aa15.13■□□□□ 0.01
VRK1-201ENST00000216639 SPSB4Q96A44 273 aa15.13■□□□□ 0.01
VRK1-201ENST00000216639 FYTTD1Q96QD9 318 aaKnown RBP15.13■□□□□ 0.01
VRK1-201ENST00000216639 SELENOIQ9C0D9 397 aa15.13■□□□□ 0.01
VRK1-201ENST00000216639 B3GNT2Q9NY97 397 aa15.13■□□□□ 0.01
VRK1-201ENST00000216639 CLCF1Q9UBD9 225 aa15.13■□□□□ 0.01
VRK1-201ENST00000216639 A0A1B0GUH1 482 aa15.12■□□□□ 0.01
VRK1-201ENST00000216639 ZNF736B4DX44 427 aaPredicted RBP15.12■□□□□ 0.01
VRK1-201ENST00000216639 ICMTO60725 284 aa15.12■□□□□ 0.01
VRK1-201ENST00000216639 RAB3DO95716 219 aa15.12■□□□□ 0.01
VRK1-201ENST00000216639 NKX2-5P52952 324 aaPredicted RBP15.12■□□□□ 0.01
VRK1-201ENST00000216639 MTCP1P56278 107 aa15.12■□□□□ 0.01
VRK1-201ENST00000216639 FAM3AP98173 230 aa15.12■□□□□ 0.01
VRK1-201ENST00000216639 ZNF92Q03936 586 aa15.12■□□□□ 0.01
VRK1-201ENST00000216639 MALLQ13021 153 aa15.12■□□□□ 0.01
VRK1-201ENST00000216639 OR8B8Q15620 311 aa15.12■□□□□ 0.01
VRK1-201ENST00000216639 RSPO4Q2I0M5 234 aaPredicted RBP15.12■□□□□ 0.01
VRK1-201ENST00000216639 LHFPL2Q6ZUX7 228 aa15.12■□□□□ 0.01
VRK1-201ENST00000216639 TRAPPC6BQ86SZ2 158 aa15.12■□□□□ 0.01
VRK1-201ENST00000216639 FJX1Q86VR8 437 aa15.12■□□□□ 0.01
VRK1-201ENST00000216639 TMEM104Q8NE00 496 aa15.12■□□□□ 0.01
VRK1-201ENST00000216639 OR5D18Q8NGL1 313 aa15.12■□□□□ 0.01
VRK1-201ENST00000216639 OR1K1Q8NGR3 316 aa15.12■□□□□ 0.01
VRK1-201ENST00000216639 CMBLQ96DG6 245 aa15.12■□□□□ 0.01
VRK1-201ENST00000216639 RAB3CQ96E17 227 aa15.12■□□□□ 0.01
VRK1-201ENST00000216639 TRIB1Q96RU8 372 aa15.12■□□□□ 0.01
VRK1-201ENST00000216639 BANF2Q9H503 90 aa15.12■□□□□ 0.01
VRK1-201ENST00000216639 FLVCR2Q9UPI3 526 aa15.12■□□□□ 0.01
VRK1-201ENST00000216639 CUL9Q8IWT3 2517 aa15.12■□□□□ 0.01
VRK1-201ENST00000216639 ZNF816-ZNF321PA0A0X1KG74 233 aa15.12■□□□□ 0.01
VRK1-201ENST00000216639 C5orf49A4QMS7 147 aa15.12■□□□□ 0.01
VRK1-201ENST00000216639 EFSO43281 561 aa15.12■□□□□ 0.01
VRK1-201ENST00000216639 NRASP01111 189 aa15.12■□□□□ 0.01
VRK1-201ENST00000216639 EDN3P14138 238 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms