RNA–Protein interactions for RNA: ENST00000212355.8

TGFBR3-201, Transcript of transforming growth factor beta receptor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TGFBR3, Length 6,465 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-201ENST00000212355 DSCR3O14972 297 aa12.23□□□□□ -0.45
TGFBR3-201ENST00000212355 PMCHP20382 165 aa12.23□□□□□ -0.45
TGFBR3-201ENST00000212355 PPICP45877 212 aa12.23□□□□□ -0.45
TGFBR3-201ENST00000212355 TMEM215Q68D42 235 aa12.23□□□□□ -0.45
TGFBR3-201ENST00000212355 C6orf201Q7Z4U5 140 aa12.23□□□□□ -0.45
TGFBR3-201ENST00000212355 MRGPREQ86SM8 312 aa12.23□□□□□ -0.45
TGFBR3-201ENST00000212355 PRO1933Q9H354 126 aa12.23□□□□□ -0.45
TGFBR3-201ENST00000212355 C20orf202A1L168 122 aa12.23□□□□□ -0.45
TGFBR3-201ENST00000212355 ABCD3P28288 659 aa12.23□□□□□ -0.45
TGFBR3-201ENST00000212355 XAF1Q6GPH4 301 aa12.23□□□□□ -0.45
TGFBR3-201ENST00000212355 OR1J1Q8NGS3 322 aa12.23□□□□□ -0.45
TGFBR3-201ENST00000212355 LURAP1Q96LR2 239 aa12.23□□□□□ -0.45
TGFBR3-201ENST00000212355 SCN3AQ9NY46 2000 aa12.23□□□□□ -0.45
TGFBR3-201ENST00000212355 MRPL58Q14197 206 aaKnown RBP12.23□□□□□ -0.45
TGFBR3-201ENST00000212355 GAMTQ14353 236 aa12.23□□□□□ -0.45
TGFBR3-201ENST00000212355 OSR2Q8N2R0 312 aa12.23□□□□□ -0.45
TGFBR3-201ENST00000212355 ADPRHL1Q8NDY3 354 aa12.23□□□□□ -0.45
TGFBR3-201ENST00000212355 CHRM2P08172 466 aa12.23□□□□□ -0.45
TGFBR3-201ENST00000212355 CD63P08962 238 aa12.23□□□□□ -0.45
TGFBR3-201ENST00000212355 SHBQ15464 509 aa12.23□□□□□ -0.45
TGFBR3-201ENST00000212355 WDR38Q5JTN6 314 aa12.23□□□□□ -0.45
TGFBR3-201ENST00000212355 ELFN2Q5R3F8 820 aa12.23□□□□□ -0.45
TGFBR3-201ENST00000212355 OR51I2Q9H344 312 aa12.23□□□□□ -0.45
TGFBR3-201ENST00000212355 PROCRQ9UNN8 238 aa12.23□□□□□ -0.45
TGFBR3-201ENST00000212355 LAMP3Q9UQV4 416 aa12.23□□□□□ -0.45
TGFBR3-201ENST00000212355 IGHV5-51A0A0C4DH38 117 aa12.22□□□□□ -0.45
TGFBR3-201ENST00000212355 OR5H15A6NDH6 313 aa12.22□□□□□ -0.45
TGFBR3-201ENST00000212355 OLFM2O95897 454 aa12.22□□□□□ -0.45
TGFBR3-201ENST00000212355 ATF1P18846 271 aa12.22□□□□□ -0.45
TGFBR3-201ENST00000212355 RAC1P63000 192 aa12.22□□□□□ -0.45
TGFBR3-201ENST00000212355 ZNF117Q03924 483 aa12.22□□□□□ -0.45
TGFBR3-201ENST00000212355 OR2T2Q6IF00 324 aa12.22□□□□□ -0.45
TGFBR3-201ENST00000212355 FBXO17Q96EF6 278 aa12.22□□□□□ -0.45
TGFBR3-201ENST00000212355 PKD1L3Q7Z443 1732 aa12.22□□□□□ -0.45
TGFBR3-201ENST00000212355 TEX261Q6UWH6 196 aa12.22□□□□□ -0.45
TGFBR3-201ENST00000212355 MOB3BQ86TA1 216 aa12.22□□□□□ -0.45
TGFBR3-201ENST00000212355 KLHDC8BQ8IXV7 354 aa12.22□□□□□ -0.45
TGFBR3-201ENST00000212355 DND1Q8IYX4 353 aaKnown RBP12.22□□□□□ -0.45
TGFBR3-201ENST00000212355 NOXO1Q8NFA2 376 aa12.22□□□□□ -0.45
TGFBR3-201ENST00000212355 BLNKQ8WV28 456 aa12.22□□□□□ -0.45
TGFBR3-201ENST00000212355 UBE2ZQ9H832 354 aaPredicted RBP12.22□□□□□ -0.45
TGFBR3-201ENST00000212355 FOXJ3Q9UPW0 622 aa12.22□□□□□ -0.45
TGFBR3-201ENST00000212355 U3KQ87 197 aa12.22□□□□□ -0.45
TGFBR3-201ENST00000212355 CLEC18AA5D8T8 446 aa12.22□□□□□ -0.45
TGFBR3-201ENST00000212355 CTSVO60911 334 aa12.22□□□□□ -0.45
TGFBR3-201ENST00000212355 CA6P23280 308 aa12.22□□□□□ -0.45
TGFBR3-201ENST00000212355 MYBPHQ13203 477 aa12.22□□□□□ -0.45
TGFBR3-201ENST00000212355 MIDNQ504T8 468 aa12.22□□□□□ -0.45
TGFBR3-201ENST00000212355 CLEC18CQ8NCF0 446 aa12.22□□□□□ -0.45
TGFBR3-201ENST00000212355 C17orf47Q8NEP4 570 aa12.22□□□□□ -0.45
TGFBR3-201ENST00000212355 DUS3LQ96G46 650 aaKnown RBP12.22□□□□□ -0.45
TGFBR3-201ENST00000212355 CABLES2Q9BTV7 478 aa12.22□□□□□ -0.45
TGFBR3-201ENST00000212355 A0A087WUJ7 227 aa12.22□□□□□ -0.45
TGFBR3-201ENST00000212355 TRAV34A0A0B4J273 112 aa12.22□□□□□ -0.45
TGFBR3-201ENST00000212355 ZNF83P51522 516 aa12.22□□□□□ -0.45
TGFBR3-201ENST00000212355 PCBP4P57723 403 aaKnown RBP12.22□□□□□ -0.45
TGFBR3-201ENST00000212355 CLN3Q13286 438 aa12.22□□□□□ -0.45
TGFBR3-201ENST00000212355 OR2F1Q13607 317 aa12.22□□□□□ -0.45
TGFBR3-201ENST00000212355 SIGLECL1Q8N7X8 197 aa12.22□□□□□ -0.45
TGFBR3-201ENST00000212355 OR4C3Q8NH37 302 aa12.22□□□□□ -0.45
TGFBR3-201ENST00000212355 RTN4IP1Q8WWV3 396 aaPredicted RBP12.22□□□□□ -0.45
TGFBR3-201ENST00000212355 DOCK5Q9H7D0 1870 aa12.22□□□□□ -0.45
TGFBR3-201ENST00000212355 POU2F2P09086 479 aa12.22□□□□□ -0.45
TGFBR3-201ENST00000212355 CT62P0C5K7 136 aa12.22□□□□□ -0.45
TGFBR3-201ENST00000212355 CTGFP29279 349 aa12.22□□□□□ -0.45
TGFBR3-201ENST00000212355 CSF2RBP32927 897 aa12.22□□□□□ -0.45
TGFBR3-201ENST00000212355 TCTAP57738 103 aa12.22□□□□□ -0.45
TGFBR3-201ENST00000212355 TSPO2Q5TGU0 170 aa12.22□□□□□ -0.45
TGFBR3-201ENST00000212355 SEZ6L2Q6UXD5 910 aa12.22□□□□□ -0.45
TGFBR3-201ENST00000212355 GALNT16Q8N428 558 aa12.22□□□□□ -0.45
TGFBR3-201ENST00000212355 KPTNQ9Y664 436 aa12.22□□□□□ -0.45
TGFBR3-201ENST00000212355 ZNF17P17021 662 aa12.21□□□□□ -0.45
TGFBR3-201ENST00000212355 LINC01555Q8NAE3 123 aa12.21□□□□□ -0.45
TGFBR3-201ENST00000212355 MISP3Q96FF7 219 aa12.21□□□□□ -0.45
TGFBR3-201ENST00000212355 IL21Q9HBE4 155 aa12.21□□□□□ -0.45
TGFBR3-201ENST00000212355 MMP25Q9NPA2 562 aa12.21□□□□□ -0.45
TGFBR3-201ENST00000212355 TOMM34Q15785 309 aaPredicted RBP12.21□□□□□ -0.45
TGFBR3-201ENST00000212355 SLC16A12Q6ZSM3 486 aa12.21□□□□□ -0.45
TGFBR3-201ENST00000212355 PLPP6Q8IY26 295 aa12.21□□□□□ -0.45
TGFBR3-201ENST00000212355 RHOFQ9HBH0 211 aa12.21□□□□□ -0.45
TGFBR3-201ENST00000212355 SLC25A19Q9HC21 320 aa12.21□□□□□ -0.45
TGFBR3-201ENST00000212355 CNTRLQ7Z7A1 2325 aa12.21□□□□□ -0.45
TGFBR3-201ENST00000212355 CBY3A6NI87 242 aa12.21□□□□□ -0.45
TGFBR3-201ENST00000212355 SLC22A20A6NK97 555 aa12.21□□□□□ -0.45
TGFBR3-201ENST00000212355 PHOX2AO14813 284 aa12.21□□□□□ -0.45
TGFBR3-201ENST00000212355 ADAM20O43506 726 aa12.21□□□□□ -0.45
TGFBR3-201ENST00000212355 IL3RAP26951 378 aa12.21□□□□□ -0.45
TGFBR3-201ENST00000212355 KIAA1456Q9P272 454 aa12.21□□□□□ -0.45
TGFBR3-201ENST00000212355 JTBO76095 146 aa12.21□□□□□ -0.46
TGFBR3-201ENST00000212355 RBP4P02753 201 aa12.21□□□□□ -0.46
TGFBR3-201ENST00000212355 CRYBB2P43320 205 aa12.21□□□□□ -0.46
TGFBR3-201ENST00000212355 TGIF2LXQ8IUE1 241 aa12.21□□□□□ -0.46
TGFBR3-201ENST00000212355 CACNA1CQ13936 2221 aa12.21□□□□□ -0.46
TGFBR3-201ENST00000212355 CCDC187A0A096LP49 1063 aa12.21□□□□□ -0.46
TGFBR3-201ENST00000212355 LOC102724200A0A096LPH7 203 aaPredicted RBP12.21□□□□□ -0.46
TGFBR3-201ENST00000212355 hCG_1809904A0A1W2PP81 198 aa12.21□□□□□ -0.46
TGFBR3-201ENST00000212355 A0A1W2PPE2 198 aa12.21□□□□□ -0.46
TGFBR3-201ENST00000212355 A0A1W2PR64 198 aa12.21□□□□□ -0.46
TGFBR3-201ENST00000212355 PEX11BO96011 259 aa12.21□□□□□ -0.46
TGFBR3-201ENST00000212355 CEACAM6P40199 344 aa12.21□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms