RNA–Protein interactions for RNA: ENST00000005226.11

USH1C-201, Transcript of USH1 protein network component harmonin, humanhuman

APPRIS P3 TSL 5 BASIC

Gene USH1C, Length 2,700 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-201ENST00000005226 BIN3Q9NQY0 253 aa12.39□□□□□ -0.43
USH1C-201ENST00000005226 SERINC1Q9NRX5 453 aa12.39□□□□□ -0.43
USH1C-201ENST00000005226 WBP1LQ9NX94 342 aa12.39□□□□□ -0.43
USH1C-201ENST00000005226 PCDHGA1Q9Y5H4 931 aa12.39□□□□□ -0.43
USH1C-201ENST00000005226 FER1L5A0AVI2 2057 aa12.39□□□□□ -0.43
USH1C-201ENST00000005226 P2RY4P51582 365 aa12.39□□□□□ -0.43
USH1C-201ENST00000005226 TAS2R31P59538 309 aa12.39□□□□□ -0.43
USH1C-201ENST00000005226 CSNK2A1P68400 391 aaPredicted RBP12.39□□□□□ -0.43
USH1C-201ENST00000005226 CYCSP99999 105 aaKnown RBP12.39□□□□□ -0.43
USH1C-201ENST00000005226 NAAAQ02083 359 aa12.39□□□□□ -0.43
USH1C-201ENST00000005226 CFHR1Q03591 330 aa12.39□□□□□ -0.43
USH1C-201ENST00000005226 CDCP2Q5VXM1 449 aa12.39□□□□□ -0.43
USH1C-201ENST00000005226 DTX1Q86Y01 620 aa12.39□□□□□ -0.43
USH1C-201ENST00000005226 ZNF441Q8N8Z8 693 aa12.39□□□□□ -0.43
USH1C-201ENST00000005226 CSNK2A3Q8NEV1 391 aa12.39□□□□□ -0.43
USH1C-201ENST00000005226 OIT3Q8WWZ8 545 aa12.39□□□□□ -0.43
USH1C-201ENST00000005226 SEC11CQ9BY50 192 aa12.39□□□□□ -0.43
USH1C-201ENST00000005226 SLC2A4RGQ9NR83 387 aa12.39□□□□□ -0.43
USH1C-201ENST00000005226 GPR27Q9NS67 375 aa12.39□□□□□ -0.43
USH1C-201ENST00000005226 EHFQ9NZC4 300 aa12.39□□□□□ -0.43
USH1C-201ENST00000005226 SRPK3Q9UPE1 567 aa12.39□□□□□ -0.43
USH1C-201ENST00000005226 ABCA7Q8IZY2 2146 aa12.39□□□□□ -0.43
USH1C-201ENST00000005226 IGKV1D-8A0A087WSZ0 117 aa12.39□□□□□ -0.43
USH1C-201ENST00000005226 IGKV1-9A0A0C4DH69 117 aa12.39□□□□□ -0.43
USH1C-201ENST00000005226 PMS2P1A4D2B8 440 aa12.39□□□□□ -0.43
USH1C-201ENST00000005226 ZNF814B7Z6K7 855 aa12.39□□□□□ -0.43
USH1C-201ENST00000005226 RAMP1O60894 148 aa12.39□□□□□ -0.43
USH1C-201ENST00000005226 CSTBP04080 98 aaKnown RBP12.39□□□□□ -0.43
USH1C-201ENST00000005226 LAP3P28838 519 aa12.39□□□□□ -0.43
USH1C-201ENST00000005226 CCR5P51681 352 aa12.39□□□□□ -0.43
USH1C-201ENST00000005226 SNU13P55769 128 aaKnown RBP12.39□□□□□ -0.43
USH1C-201ENST00000005226 SNRPEP62304 92 aaKnown RBP12.39□□□□□ -0.43
USH1C-201ENST00000005226 RNF4P78317 190 aa12.39□□□□□ -0.43
USH1C-201ENST00000005226 SPEM2Q0P670 501 aa12.39□□□□□ -0.43
USH1C-201ENST00000005226 AVPI1Q5T686 147 aa12.39□□□□□ -0.43
USH1C-201ENST00000005226 LCN10Q6JVE6 187 aa12.39□□□□□ -0.43
USH1C-201ENST00000005226 OR51T1Q8NGJ9 327 aa12.39□□□□□ -0.43
USH1C-201ENST00000005226 CDC6Q99741 560 aa12.39□□□□□ -0.43
USH1C-201ENST00000005226 B3GAT1Q9P2W7 334 aa12.39□□□□□ -0.43
USH1C-201ENST00000005226 SHISA7A6NL88 538 aa12.38□□□□□ -0.43
USH1C-201ENST00000005226 RHPN2P1A8MT19 583 aa12.38□□□□□ -0.43
USH1C-201ENST00000005226 B2MP61769 119 aa12.38□□□□□ -0.43
USH1C-201ENST00000005226 PEA15Q15121 130 aa12.38□□□□□ -0.43
USH1C-201ENST00000005226 ZNF529Q6P280 563 aa12.38□□□□□ -0.43
USH1C-201ENST00000005226 FBXO46Q6PJ61 603 aaPredicted RBP12.38□□□□□ -0.43
USH1C-201ENST00000005226 POC1AQ8NBT0 407 aa12.38□□□□□ -0.43
USH1C-201ENST00000005226 MFSD8Q8NHS3 518 aa12.38□□□□□ -0.43
USH1C-201ENST00000005226 ADAMTS17Q8TE56 1095 aa12.38□□□□□ -0.43
USH1C-201ENST00000005226 TMEM234Q8WY98 164 aa12.38□□□□□ -0.43
USH1C-201ENST00000005226 TAF9BQ9HBM6 251 aa12.38□□□□□ -0.43
USH1C-201ENST00000005226 RAB18Q9NP72 206 aa12.38□□□□□ -0.43
USH1C-201ENST00000005226 MED19A0JLT2 244 aaPredicted RBP12.38□□□□□ -0.43
USH1C-201ENST00000005226 MTRF1O75570 445 aaKnown RBP12.38□□□□□ -0.43
USH1C-201ENST00000005226 CHRM2P08172 466 aa12.38□□□□□ -0.43
USH1C-201ENST00000005226 PTGFRP43088 359 aa12.38□□□□□ -0.43
USH1C-201ENST00000005226 CBX5P45973 191 aa12.38□□□□□ -0.43
USH1C-201ENST00000005226 CAV2P51636 162 aa12.38□□□□□ -0.43
USH1C-201ENST00000005226 F2RL1P55085 397 aa12.38□□□□□ -0.43
USH1C-201ENST00000005226 CLRN1P58418 232 aa12.38□□□□□ -0.43
USH1C-201ENST00000005226 ZP4Q12836 540 aa12.38□□□□□ -0.43
USH1C-201ENST00000005226 PNLIPRP3Q17RR3 467 aa12.38□□□□□ -0.43
USH1C-201ENST00000005226 BSCL2Q96G97 398 aaPredicted RBP12.38□□□□□ -0.43
USH1C-201ENST00000005226 AKR1E2Q96JD6 320 aa12.38□□□□□ -0.43
USH1C-201ENST00000005226 C2orf50Q96LR7 162 aa12.38□□□□□ -0.43
USH1C-201ENST00000005226 CLCC1Q96S66 551 aa12.38□□□□□ -0.43
USH1C-201ENST00000005226 ELL3Q9HB65 397 aaPredicted RBP12.38□□□□□ -0.43
USH1C-201ENST00000005226 LIPT2A6NK58 231 aa12.37□□□□□ -0.43
USH1C-201ENST00000005226 COLCA2A8K830 154 aa12.37□□□□□ -0.43
USH1C-201ENST00000005226 C10orf142B7Z368 130 aa12.37□□□□□ -0.43
USH1C-201ENST00000005226 EIF3GO75821 320 aaKnown RBP eCLIP12.37□□□□□ -0.43
USH1C-201ENST00000005226 OR8U9P0C7N5 309 aa12.37□□□□□ -0.43
USH1C-201ENST00000005226 GLI4P10075 376 aa12.37□□□□□ -0.43
USH1C-201ENST00000005226 DAOP14920 347 aa12.37□□□□□ -0.43
USH1C-201ENST00000005226 MEOX2P50222 304 aa12.37□□□□□ -0.43
USH1C-201ENST00000005226 MYBPHQ13203 477 aa12.37□□□□□ -0.43
USH1C-201ENST00000005226 VAX1Q5SQQ9 334 aa12.37□□□□□ -0.43
USH1C-201ENST00000005226 RBMS3Q6XE24 437 aaKnown RBP12.37□□□□□ -0.43
USH1C-201ENST00000005226 OR2AJ1Q8NGZ0 328 aa12.37□□□□□ -0.43
USH1C-201ENST00000005226 OR8U1Q8NH10 309 aa12.37□□□□□ -0.43
USH1C-201ENST00000005226 KCNG3Q8TAE7 436 aa12.37□□□□□ -0.43
USH1C-201ENST00000005226 SFT2D1Q8WV19 159 aa12.37□□□□□ -0.43
USH1C-201ENST00000005226 SECTM1Q8WVN6 248 aa12.37□□□□□ -0.43
USH1C-201ENST00000005226 ZDHHC12Q96GR4 267 aa12.37□□□□□ -0.43
USH1C-201ENST00000005226 CDCA3Q99618 268 aaPredicted RBP12.37□□□□□ -0.43
USH1C-201ENST00000005226 HDHD3Q9BSH5 251 aaPredicted RBP12.37□□□□□ -0.43
USH1C-201ENST00000005226 TNFSF12-TNFSF13A0A0A6YY99 330 aa12.37□□□□□ -0.43
USH1C-201ENST00000005226 LILRA5A6NI73 299 aa12.37□□□□□ -0.43
USH1C-201ENST00000005226 MFNGO00587 321 aa12.37□□□□□ -0.43
USH1C-201ENST00000005226 HKR1P10072 659 aa12.37□□□□□ -0.43
USH1C-201ENST00000005226 RPS2P15880 293 aaKnown RBP12.37□□□□□ -0.43
USH1C-201ENST00000005226 TBPP20226 339 aa12.37□□□□□ -0.43
USH1C-201ENST00000005226 SERPINA2P20848 420 aa12.37□□□□□ -0.43
USH1C-201ENST00000005226 BLVRBP30043 206 aaPredicted RBP12.37□□□□□ -0.43
USH1C-201ENST00000005226 ACY1Q03154 408 aa12.37□□□□□ -0.43
USH1C-201ENST00000005226 DHRS11Q6UWP2 260 aa12.37□□□□□ -0.43
USH1C-201ENST00000005226 SLC16A13Q7RTY0 426 aa12.37□□□□□ -0.43
USH1C-201ENST00000005226 GKN2Q86XP6 184 aa12.37□□□□□ -0.43
USH1C-201ENST00000005226 C14orf79Q96F83 325 aa12.37□□□□□ -0.43
USH1C-201ENST00000005226 AQP10Q96PS8 301 aa12.37□□□□□ -0.43
USH1C-201ENST00000005226 IFT22Q9H7X7 185 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms