RNA–Protein interactions for RNA: ENSMUST00000028280.13

Col5a1-201, Transcript of Collagen alpha-1(V) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col5a1, Length 8,406 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a1-201ENSMUST00000028280 Akap6E9Q9K8 2307 aa12.84□□□□□ -0.35
Col5a1-201ENSMUST00000028280 Mef2bO55087 349 aa12.84□□□□□ -0.35
Col5a1-201ENSMUST00000028280 H2-T3P14432 384 aa12.84□□□□□ -0.35
Col5a1-201ENSMUST00000028280 Lhx4P53776 390 aa12.84□□□□□ -0.35
Col5a1-201ENSMUST00000028280 Samd12Q0VE29 161 aa12.84□□□□□ -0.35
Col5a1-201ENSMUST00000028280 Ndufv3Q8BK30 104 aaKnown RBP12.84□□□□□ -0.35
Col5a1-201ENSMUST00000028280 DhodhO35435 395 aa12.84□□□□□ -0.35
Col5a1-201ENSMUST00000028280 Adh1P00329 375 aa12.84□□□□□ -0.35
Col5a1-201ENSMUST00000028280 Nhlh1Q02576 133 aa12.84□□□□□ -0.35
Col5a1-201ENSMUST00000028280 Grxcr2Q3TYR5 254 aa12.84□□□□□ -0.35
Col5a1-201ENSMUST00000028280 Nhlh2Q64221 135 aa12.84□□□□□ -0.35
Col5a1-201ENSMUST00000028280 Shisa4Q8CA71 197 aa12.84□□□□□ -0.35
Col5a1-201ENSMUST00000028280 Ebf4Q8K4J2 599 aa12.84□□□□□ -0.35
Col5a1-201ENSMUST00000028280 Ceacam15A0A0B4J1L0 234 aa12.83□□□□□ -0.35
Col5a1-201ENSMUST00000028280 Olfr895L7N210 316 aa12.83□□□□□ -0.35
Col5a1-201ENSMUST00000028280 Olfr141Q60880 325 aa12.83□□□□□ -0.35
Col5a1-201ENSMUST00000028280 Hand1Q64279 216 aa12.83□□□□□ -0.35
Col5a1-201ENSMUST00000028280 Fpr-rs7Q71MR7 338 aa12.83□□□□□ -0.35
Col5a1-201ENSMUST00000028280 Olfr406Q7TRX0 323 aa12.83□□□□□ -0.35
Col5a1-201ENSMUST00000028280 Rdh16f2Q8K3M1 318 aa12.83□□□□□ -0.35
Col5a1-201ENSMUST00000028280 Olfr187Q8VEX6 308 aa12.83□□□□□ -0.35
Col5a1-201ENSMUST00000028280 MeiobQ9D513 470 aa12.83□□□□□ -0.35
Col5a1-201ENSMUST00000028280 Golt1aQ9DCQ3 133 aa12.83□□□□□ -0.35
Col5a1-201ENSMUST00000028280 Olfr267A2AM35 313 aa12.83□□□□□ -0.36
Col5a1-201ENSMUST00000028280 Gm4907B1AXB9 411 aa12.83□□□□□ -0.36
Col5a1-201ENSMUST00000028280 Mc5rP41149 325 aa12.83□□□□□ -0.36
Col5a1-201ENSMUST00000028280 Slc25a42Q8R0Y8 318 aa12.83□□□□□ -0.36
Col5a1-201ENSMUST00000028280 Olfr1110Q8VG38 312 aa12.83□□□□□ -0.36
Col5a1-201ENSMUST00000028280 St3gal6Q8VIB3 329 aa12.83□□□□□ -0.36
Col5a1-201ENSMUST00000028280 Keg1Q9DCY0 295 aa12.83□□□□□ -0.36
Col5a1-201ENSMUST00000028280 Nubp2Q9R061 275 aa12.83□□□□□ -0.36
Col5a1-201ENSMUST00000028280 Zfp964B2RR88 472 aa12.83□□□□□ -0.36
Col5a1-201ENSMUST00000028280 Vmn1r80L7N1Z3 308 aa12.83□□□□□ -0.36
Col5a1-201ENSMUST00000028280 Zfp772Q3UQL6 416 aa12.83□□□□□ -0.36
Col5a1-201ENSMUST00000028280 IdnkQ8R0J8 184 aa12.83□□□□□ -0.36
Col5a1-201ENSMUST00000028280 Rpe65Q91ZQ5 533 aa12.83□□□□□ -0.36
Col5a1-201ENSMUST00000028280 Mmp27D3YV89 551 aa12.83□□□□□ -0.36
Col5a1-201ENSMUST00000028280 Csf2rbP26955 896 aa12.83□□□□□ -0.36
Col5a1-201ENSMUST00000028280 Vezf1Q5SXC4 518 aa12.83□□□□□ -0.36
Col5a1-201ENSMUST00000028280 Tfap2eQ6VUP9 442 aa12.83□□□□□ -0.36
Col5a1-201ENSMUST00000028280 Olfr884Q7TRE1 309 aa12.83□□□□□ -0.36
Col5a1-201ENSMUST00000028280 H2-M10.3Q85ZW6 330 aa12.83□□□□□ -0.36
Col5a1-201ENSMUST00000028280 Asb13Q8VBX0 278 aa12.83□□□□□ -0.36
Col5a1-201ENSMUST00000028280 Arpc3Q9JM76 178 aaKnown RBP12.83□□□□□ -0.36
Col5a1-201ENSMUST00000028280 Sstr5O08858 362 aa12.83□□□□□ -0.36
Col5a1-201ENSMUST00000028280 Zfp7Q3TFZ4 685 aa12.83□□□□□ -0.36
Col5a1-201ENSMUST00000028280 MthfsdQ3URQ7 372 aaKnown RBP12.83□□□□□ -0.36
Col5a1-201ENSMUST00000028280 Cggbp1Q8BHG9 167 aaKnown RBP12.83□□□□□ -0.36
Col5a1-201ENSMUST00000028280 Mic13Q8R404 119 aaKnown RBP12.83□□□□□ -0.36
Col5a1-201ENSMUST00000028280 Gm17087V9GXQ2 156 aa12.83□□□□□ -0.36
Col5a1-201ENSMUST00000028280 Gm15155B1B034 138 aa12.83□□□□□ -0.36
Col5a1-201ENSMUST00000028280 Gm10718D3Z1I7 227 aa12.83□□□□□ -0.36
Col5a1-201ENSMUST00000028280 1700003H04RikE9PXM2 192 aa12.83□□□□□ -0.36
Col5a1-201ENSMUST00000028280 Sox18P43680 377 aa12.83□□□□□ -0.36
Col5a1-201ENSMUST00000028280 Zfp39Q02525 718 aa12.83□□□□□ -0.36
Col5a1-201ENSMUST00000028280 4930480E11RikQ0VG34 394 aa12.83□□□□□ -0.36
Col5a1-201ENSMUST00000028280 Olfr1509Q7TQQ0 308 aa12.83□□□□□ -0.36
Col5a1-201ENSMUST00000028280 Adam21Q9JI76 729 aa12.83□□□□□ -0.36
Col5a1-201ENSMUST00000028280 Esp4A8R0T8 117 aa12.83□□□□□ -0.36
Col5a1-201ENSMUST00000028280 Vmn1r129E9QA94 307 aa12.83□□□□□ -0.36
Col5a1-201ENSMUST00000028280 Gm8720K9J7F4 307 aa12.83□□□□□ -0.36
Col5a1-201ENSMUST00000028280 Mmp12P34960 473 aa12.83□□□□□ -0.36
Col5a1-201ENSMUST00000028280 Sult1a1P52840 291 aa12.83□□□□□ -0.36
Col5a1-201ENSMUST00000028280 Acod1P54987 488 aa12.83□□□□□ -0.36
Col5a1-201ENSMUST00000028280 Vmn1r15Q14C10 299 aa12.83□□□□□ -0.36
Col5a1-201ENSMUST00000028280 Pik3ip1Q7TMJ8 264 aa12.83□□□□□ -0.36
Col5a1-201ENSMUST00000028280 Slc29a3Q99P65 475 aa12.83□□□□□ -0.36
Col5a1-201ENSMUST00000028280 Pttg1Q9CQJ7 199 aa12.83□□□□□ -0.36
Col5a1-201ENSMUST00000028280 Neu3Q9JMH7 418 aa12.83□□□□□ -0.36
Col5a1-201ENSMUST00000028280 Gm10778A0A087WNP5 499 aa12.82□□□□□ -0.36
Col5a1-201ENSMUST00000028280 Ppp1r3dA2AJW4 279 aa12.82□□□□□ -0.36
Col5a1-201ENSMUST00000028280 Syngr2O55101 224 aa12.82□□□□□ -0.36
Col5a1-201ENSMUST00000028280 GalP47212 124 aa12.82□□□□□ -0.36
Col5a1-201ENSMUST00000028280 Smim7Q5RKS2 75 aa12.82□□□□□ -0.36
Col5a1-201ENSMUST00000028280 Sft2d1Q5SSN7 159 aa12.82□□□□□ -0.36
Col5a1-201ENSMUST00000028280 Sla2Q8R4L0 259 aa12.82□□□□□ -0.36
Col5a1-201ENSMUST00000028280 Flvcr2Q91X85 551 aa12.82□□□□□ -0.36
Col5a1-201ENSMUST00000028280 Bola1Q9D8S9 137 aaKnown RBP12.82□□□□□ -0.36
Col5a1-201ENSMUST00000028280 Q9DAE8 263 aa12.82□□□□□ -0.36
Col5a1-201ENSMUST00000028280 Zfp442A2AQA0 667 aa12.82□□□□□ -0.36
Col5a1-201ENSMUST00000028280 H2-M1F7CXU4 344 aa12.82□□□□□ -0.36
Col5a1-201ENSMUST00000028280 Pcsk4P29121 655 aa12.82□□□□□ -0.36
Col5a1-201ENSMUST00000028280 ErasQ7TN89 227 aa12.82□□□□□ -0.36
Col5a1-201ENSMUST00000028280 CmblQ8R1G2 245 aa12.82□□□□□ -0.36
Col5a1-201ENSMUST00000028280 Mrpl54Q9CPW3 135 aa12.82□□□□□ -0.36
Col5a1-201ENSMUST00000028280 Scamp2Q9ERN0 329 aa12.82□□□□□ -0.36
Col5a1-201ENSMUST00000028280 Cldn8Q9Z260 225 aa12.82□□□□□ -0.36
Col5a1-201ENSMUST00000028280 Zfp345A2AQA1 561 aa12.82□□□□□ -0.36
Col5a1-201ENSMUST00000028280 Gm572B1ARY8 399 aa12.82□□□□□ -0.36
Col5a1-201ENSMUST00000028280 Rpl12P35979 165 aaKnown RBP12.82□□□□□ -0.36
Col5a1-201ENSMUST00000028280 Dpagt1P42867 410 aa12.82□□□□□ -0.36
Col5a1-201ENSMUST00000028280 Tmem64Q3U145 381 aa12.82□□□□□ -0.36
Col5a1-201ENSMUST00000028280 Cldn34b4Q3V0X2 211 aa12.82□□□□□ -0.36
Col5a1-201ENSMUST00000028280 Olfr146Q60884 306 aa12.82□□□□□ -0.36
Col5a1-201ENSMUST00000028280 Vmn1r208Q8R275 308 aa12.82□□□□□ -0.36
Col5a1-201ENSMUST00000028280 Slco3a1Q8R3L5 710 aa12.82□□□□□ -0.36
Col5a1-201ENSMUST00000028280 Cisd2Q9CQB5 135 aaKnown RBP12.82□□□□□ -0.36
Col5a1-201ENSMUST00000028280 Dtd1Q9DD18 209 aaKnown RBP12.82□□□□□ -0.36
Col5a1-201ENSMUST00000028280 Olfr282A1L1B4 308 aa12.82□□□□□ -0.36
Col5a1-201ENSMUST00000028280 Gm10112D3YWP5 117 aa12.82□□□□□ -0.36
Retrieved 100 of 22,080 RNA–protein pairs in 38 ms