RNA–Protein interactions for RNA: ENST00000642137.1

LINC00339-213, long intergenic non-protein coding RNA 339, humanhuman

BASIC

Gene LINC00339, Length 222 nt, Biotype transcribed processed pseudogene, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-213ENST00000642137 C16orf71Q8IYS4 520 aaPredicted RBP15.12■□□□□ 0.01
LINC00339-213ENST00000642137 XAGE2Q96GT9 111 aa15.12■□□□□ 0.01
LINC00339-213ENST00000642137 IRS2Q9Y4H2 1338 aa15.12■□□□□ 0.01
LINC00339-213ENST00000642137 FER1L6Q2WGJ9 1857 aa15.12■□□□□ 0.01
LINC00339-213ENST00000642137 ZNF609O15014 1411 aa15.11■□□□□ 0.01
LINC00339-213ENST00000642137 WASHC4Q2M389 1173 aa15.11■□□□□ 0.01
LINC00339-213ENST00000642137 CAVIN4Q5BKX8 364 aa15.11■□□□□ 0.01
LINC00339-213ENST00000642137 FBXO33Q7Z6M2 555 aa15.11■□□□□ 0.01
LINC00339-213ENST00000642137 ZC3H12CQ9C0D7 883 aaKnown RBP15.11■□□□□ 0.01
LINC00339-213ENST00000642137 LTBP3Q9NS15 1303 aa15.11■□□□□ 0.01
LINC00339-213ENST00000642137 ZBTB22O15209 634 aa15.1■□□□□ 0.01
LINC00339-213ENST00000642137 CCDC158Q5M9N0 1113 aa15.1■□□□□ 0.01
LINC00339-213ENST00000642137 GORABQ5T7V8 394 aa15.1■□□□□ 0.01
LINC00339-213ENST00000642137 FAM84BQ96KN1 310 aaPredicted RBP15.1■□□□□ 0.01
LINC00339-213ENST00000642137 DBNDD2Q9BQY9 259 aa15.1■□□□□ 0.01
LINC00339-213ENST00000642137 BCL11AQ9H165 835 aa15.1■□□□□ 0.01
LINC00339-213ENST00000642137 DBNLQ9UJU6 430 aaKnown RBP15.1■□□□□ 0.01
LINC00339-213ENST00000642137 MED23Q9ULK4 1368 aa15.1■□□□□ 0.01
LINC00339-213ENST00000642137 YBX3P16989 372 aaKnown RBP eCLIP15.09■□□□□ 0.01
LINC00339-213ENST00000642137 PDE4AP27815 886 aa15.09■□□□□ 0.01
LINC00339-213ENST00000642137 ADORA1P30542 326 aa15.09■□□□□ 0.01
LINC00339-213ENST00000642137 HIBADHP31937 336 aaKnown RBP15.09■□□□□ 0.01
LINC00339-213ENST00000642137 BCAMP50895 628 aa15.09■□□□□ 0.01
LINC00339-213ENST00000642137 GPR162Q16538 588 aa15.09■□□□□ 0.01
LINC00339-213ENST00000642137 ARHGAP27Q6ZUM4 889 aa15.09■□□□□ 0.01
LINC00339-213ENST00000642137 TXNRD3Q86VQ6 643 aa15.09■□□□□ 0.01
LINC00339-213ENST00000642137 PLEKHM2Q8IWE5 1019 aa15.09■□□□□ 0.01
LINC00339-213ENST00000642137 ZNF512BQ96KM6 892 aaPredicted RBP15.09■□□□□ 0.01
LINC00339-213ENST00000642137 TAOK3Q9H2K8 898 aa15.09■□□□□ 0.01
LINC00339-213ENST00000642137 STAP2Q9UGK3 403 aa15.09■□□□□ 0.01
LINC00339-213ENST00000642137 SALL3Q9BXA9 1300 aa15.09■□□□□ 0.01
LINC00339-213ENST00000642137 DUOX1Q9NRD9 1551 aa15.08■□□□□ 0
LINC00339-213ENST00000642137 NFKBIEO00221 500 aa15.08■□□□□ 0
LINC00339-213ENST00000642137 RIMBP2O15034 1052 aa15.08■□□□□ 0
LINC00339-213ENST00000642137 GRIN3BO60391 1043 aa15.08■□□□□ 0
LINC00339-213ENST00000642137 KLRK1P26718 216 aa15.08■□□□□ 0
LINC00339-213ENST00000642137 GYG1P46976 350 aa15.08■□□□□ 0
LINC00339-213ENST00000642137 KIAA2012Q0VF49 1180 aa15.08■□□□□ 0
LINC00339-213ENST00000642137 CCDC102BQ68D86 513 aa15.08■□□□□ 0
LINC00339-213ENST00000642137 PELP1Q8IZL8 1130 aaKnown RBP15.08■□□□□ 0
LINC00339-213ENST00000642137 COA1Q9GZY4 146 aa15.08■□□□□ 0
LINC00339-213ENST00000642137 OSBPL3Q9H4L5 887 aa15.08■□□□□ 0
LINC00339-213ENST00000642137 ECHDC1Q9NTX5 307 aa15.08■□□□□ 0
LINC00339-213ENST00000642137 TLR7Q9NYK1 1049 aaKnown RBP15.08■□□□□ 0
LINC00339-213ENST00000642137 TTC41PQ6P2S7 1318 aa15.08■□□□□ 0
LINC00339-213ENST00000642137 ARAP2Q8WZ64 1704 aa15.08■□□□□ 0
LINC00339-213ENST00000642137 UQCRFS1P1P0C7P4 283 aa15.07■□□□□ 0
LINC00339-213ENST00000642137 MX1P20591 662 aa15.07■□□□□ 0
LINC00339-213ENST00000642137 PDE1AP54750 535 aa15.07■□□□□ 0
LINC00339-213ENST00000642137 ZNF804AQ7Z570 1209 aa15.07■□□□□ 0
LINC00339-213ENST00000642137 VPS37DQ86XT2 251 aa15.07■□□□□ 0
LINC00339-213ENST00000642137 OTUD7AQ8TE49 926 aaPredicted RBP15.07■□□□□ 0
LINC00339-213ENST00000642137 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.07■□□□□ 0
LINC00339-213ENST00000642137 GPATCH3Q96I76 525 aa15.07■□□□□ 0
LINC00339-213ENST00000642137 GPR101Q96P66 508 aaPredicted RBP15.07■□□□□ 0
LINC00339-213ENST00000642137 CD209Q9NNX6 404 aa15.07■□□□□ 0
LINC00339-213ENST00000642137 GNL3LQ9NVN8 582 aaKnown RBP15.07■□□□□ 0
LINC00339-213ENST00000642137 G3V3G9 751 aa15.06■□□□□ 0
LINC00339-213ENST00000642137 ERC2O15083 957 aa15.06■□□□□ 0
LINC00339-213ENST00000642137 PPIP5K2O43314 1243 aa15.06■□□□□ 0
LINC00339-213ENST00000642137 IL1R1P14778 569 aa15.06■□□□□ 0
LINC00339-213ENST00000642137 ATP5JP18859 108 aa15.06■□□□□ 0
LINC00339-213ENST00000642137 ARID4AP29374 1257 aaPredicted RBP15.06■□□□□ 0
LINC00339-213ENST00000642137 IARSP41252 1262 aaKnown RBP15.06■□□□□ 0
LINC00339-213ENST00000642137 PHKA1P46020 1223 aa15.06■□□□□ 0
LINC00339-213ENST00000642137 TTC39AQ5SRH9 613 aa15.06■□□□□ 0
LINC00339-213ENST00000642137 DCAF8Q5TAQ9 597 aa15.06■□□□□ 0
LINC00339-213ENST00000642137 PODNQ7Z5L7 613 aa15.06■□□□□ 0
LINC00339-213ENST00000642137 TDRD7Q8NHU6 1098 aaKnown RBP15.06■□□□□ 0
LINC00339-213ENST00000642137 ZNF277Q9NRM2 450 aaPredicted RBP15.06■□□□□ 0
LINC00339-213ENST00000642137 SEMA3EO15041 775 aa15.05■□□□□ -0
LINC00339-213ENST00000642137 AOC3Q16853 763 aa15.05■□□□□ -0
LINC00339-213ENST00000642137 AOX1Q06278 1338 aa15.05■□□□□ -0
LINC00339-213ENST00000642137 CCDC88AQ3V6T2 1871 aa15.04■□□□□ -0
LINC00339-213ENST00000642137 GLRX3O76003 335 aaKnown RBP15.04■□□□□ -0
LINC00339-213ENST00000642137 DOK7Q18PE1 504 aa15.04■□□□□ -0
LINC00339-213ENST00000642137 LARGE2Q8N3Y3 721 aa15.04■□□□□ -0
LINC00339-213ENST00000642137 DENND2AQ9ULE3 1009 aa15.04■□□□□ -0
LINC00339-213ENST00000642137 CHD4Q14839 1912 aa15.04■□□□□ -0
LINC00339-213ENST00000642137 DCAF8L1A6NGE4 600 aa15.03■□□□□ -0
LINC00339-213ENST00000642137 LMNB1P20700 586 aa15.03■□□□□ -0
LINC00339-213ENST00000642137 RASSF7Q02833 373 aa15.03■□□□□ -0
LINC00339-213ENST00000642137 PI4K2BQ8TCG2 481 aa15.03■□□□□ -0
LINC00339-213ENST00000642137 JDP2Q8WYK2 163 aa15.03■□□□□ -0
LINC00339-213ENST00000642137 SBF1O95248 1867 aa15.03■□□□□ -0
LINC00339-213ENST00000642137 PDS5AQ29RF7 1337 aaKnown RBP15.02■□□□□ -0
LINC00339-213ENST00000642137 ECE2O60344 883 aa15.02■□□□□ -0
LINC00339-213ENST00000642137 FRAT2O75474 233 aaPredicted RBP15.02■□□□□ -0
LINC00339-213ENST00000642137 MCAMP43121 646 aa15.02■□□□□ -0
LINC00339-213ENST00000642137 RGS3P49796 1198 aa15.02■□□□□ -0
LINC00339-213ENST00000642137 PRELPP51888 382 aa15.02■□□□□ -0
LINC00339-213ENST00000642137 NIM1KQ8IY84 436 aa15.02■□□□□ -0
LINC00339-213ENST00000642137 HAUS7Q99871 368 aa15.02■□□□□ -0
LINC00339-213ENST00000642137 BOLA2Q9H3K6 86 aa15.02■□□□□ -0
LINC00339-213ENST00000642137 DBNDD1Q9H9R9 158 aa15.02■□□□□ -0
LINC00339-213ENST00000642137 HMG20BQ9P0W2 317 aa15.02■□□□□ -0
LINC00339-213ENST00000642137 AKAP11Q9UKA4 1901 aa15.02□□□□□ -0.01
LINC00339-213ENST00000642137 FAM205AQ6ZU69 1335 aa15.01□□□□□ -0.01
LINC00339-213ENST00000642137 SKAP1Q86WV1 359 aa15.01□□□□□ -0.01
LINC00339-213ENST00000642137 SPATA5Q8NB90 893 aa15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms